Gene annotation
Transcriptome id Sobic.009G014400.1
Synonym
Functional annotation expressed protein
UniProt E6PBN3 , G3LI13 , A0A1B6P627 , H6UF77 , R4N7W5
Pfam PF02701
Panther DB PTHR31992 PTHR31992:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT3G55370 : OBF-binding protein 3
RAP-DB (Rice) LOC_Os05g02150.1 : expressed protein
MaizeGDB (Corn) Zm00025a025405 , Zm00025a016425 , Zm00025a037944 , Zm00025a006998 , Zm00025a040930 , Zm00025a052752 , Zm00025a038256 , Zm00025a040004 , Zm00025a008812 , Zm00025a017812 , Zm00025a027510 , Zm00025a044220
Brachypodium KQK22335 , KQK07701 , KQK11789 , KQK09823 , KQJ96615
Barley HORVU1Hr1G076800.1 , HORVU5Hr1G113190.2 , HORVU5Hr1G113190.1 , HORVU1Hr1G005390.4 , HORVU1Hr1G005390.5 , HORVU1Hr1G005390.1 , HORVU1Hr1G005390.2 , HORVU1Hr1G005390.3 , HORVU5Hr1G113220.2 , HORVU3Hr1G116260.2 , HORVU3Hr1G116260.1 , HORVU3Hr1G116220.1 , HORVU3Hr1G116220.2
Wheat TraesCS4B02G206800 , TraesCS3D02G537400 , TraesCS1A02G035200 , TraesCS4D02G207600 , TraesCS5A02G078100 , TraesCS5A02G078100 , TraesCS3A02G403500 , TraesCS5D02G493000 , TraesCS5D02G093800 , TraesCS1B02G045000 , TraesCS1B02G045000 , TraesCS1B02G045000 , TraesCS5B02G492600 , TraesCS5D02G093800 , TraesCS5B02G087600 , TraesCS5B02G087600 , TraesCS5B02G087600 , TraesCS3A02G532000 , TraesCS1D02G036700 , TraesCS1D02G036700 , TraesCS4A02G097800 , TraesCS3B02G608800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G158100 expressed protein -
2 Sobic.010G115800 B-box (BBX) protein(PubMedID : 30626335)@-(PubMedID : 21930910)@floral activator(PubMedID : 24884377)@CCT/B-box zinc finger protein, putative, expressed -
3 Sobic.006G210100 zinc finger domain, LSD1 subclass family protein, expressed -
4 Sobic.006G246900 expressed protein -
5 Sobic.008G153600 WRKY94, expressed -
6 Sobic.009G045700 E3 ubiquitin-protein ligase SINA-like, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
7 Sobic.003G259901 - -
8 Sobic.004G290800 GRAS family transcription factor(PubMedID : 23915383)@scarecrow, putative, expressed -
9 Sobic.009G140500 no apical meristem protein, putative, expressed -
10 Sobic.001G132300 NB-ARC domain containing protein, expressed -
11 Sobic.003G325200 disease resistance protein, putative, expressed -
12 Sobic.004G241500 expressed protein -
13 Sobic.005G225800 white-brown complex homolog protein 11, putative, expressed -
14 Sobic.001G360900 peptidyl-prolyl isomerase PASTICCINO1, putative, expressed -
15 Sobic.003G020100 - -
16 Sobic.007G054000 powdery mildew resistance protein PM3b, putative, expressed -
17 Sobic.007G052900 acetyltransferase, GNAT family, putative, expressed -
18 Sobic.004G035000 S-adenosyl-L-methionine-dependent methyltransferase mraW, putative, expressed -
19 Sobic.005G039500 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
20 Sobic.005G077466 - -


Gene co-expression network
sample Sobic009G014400 Sobic009G014400 Sobic007G158100 Sobic007G158100 Sobic009G014400--Sobic007G158100 Sobic010G115800 Sobic010G115800 Sobic009G014400--Sobic010G115800 Sobic006G210100 Sobic006G210100 Sobic009G014400--Sobic006G210100 Sobic006G246900 Sobic006G246900 Sobic009G014400--Sobic006G246900 Sobic008G153600 Sobic008G153600 Sobic009G014400--Sobic008G153600 Sobic009G045700 Sobic009G045700 Sobic009G014400--Sobic009G045700 Sobic003G259901 Sobic003G259901 Sobic009G014400--Sobic003G259901 Sobic004G290800 Sobic004G290800 Sobic009G014400--Sobic004G290800 Sobic009G140500 Sobic009G140500 Sobic009G014400--Sobic009G140500 Sobic007G158100--Sobic009G014400 Sobic007G130100 Sobic007G130100 Sobic007G158100--Sobic007G130100 Sobic001G504000 Sobic001G504000 Sobic007G158100--Sobic001G504000 Sobic001G368400 Sobic001G368400 Sobic007G158100--Sobic001G368400 Sobic008G175800 Sobic008G175800 Sobic007G158100--Sobic008G175800 Sobic007G158100--Sobic009G140500 Sobic009G087800 Sobic009G087800 Sobic007G158100--Sobic009G087800 Sobic007G158100--Sobic004G290800 Sobic003G107800 Sobic003G107800 Sobic007G158100--Sobic003G107800 Sobic010G115800--Sobic006G246900 Sobic010G115800--Sobic009G014400 Sobic009G212700 Sobic009G212700 Sobic010G115800--Sobic009G212700 Sobic005G225800 Sobic005G225800 Sobic010G115800--Sobic005G225800 Sobic008G063000 Sobic008G063000 Sobic010G115800--Sobic008G063000 Sobic009G134500 Sobic009G134500 Sobic010G115800--Sobic009G134500 Sobic001G132300 Sobic001G132300 Sobic010G115800--Sobic001G132300 Sobic007G037900 Sobic007G037900 Sobic010G115800--Sobic007G037900 Sobic001G035900 Sobic001G035900 Sobic010G115800--Sobic001G035900 Sobic003G163100 Sobic003G163100 Sobic006G210100--Sobic003G163100 Sobic001G360900 Sobic001G360900 Sobic006G210100--Sobic001G360900 Sobic001G303675 Sobic001G303675 Sobic006G210100--Sobic001G303675 Sobic006G210100--Sobic006G246900 Sobic006G210100--Sobic003G259901 Sobic002G144933 Sobic002G144933 Sobic006G210100--Sobic002G144933 Sobic006G145000 Sobic006G145000 Sobic006G210100--Sobic006G145000 Sobic002G151600 Sobic002G151600 Sobic006G210100--Sobic002G151600 Sobic004G211400 Sobic004G211400 Sobic006G210100--Sobic004G211400 Sobic001G162300 Sobic001G162300 Sobic006G246900--Sobic001G162300 Sobic003G268300 Sobic003G268300 Sobic006G246900--Sobic003G268300 Sobic006G246900--Sobic007G037900 Sobic001G094000 Sobic001G094000 Sobic006G246900--Sobic001G094000 Sobic002G157000 Sobic002G157000 Sobic006G246900--Sobic002G157000 Sobic006G246900--Sobic009G134500 Sobic006G246900--Sobic008G063000 Sobic001G477800 Sobic001G477800 Sobic006G246900--Sobic001G477800 Sobic007G011400 Sobic007G011400 Sobic006G246900--Sobic007G011400 Sobic008G153600--Sobic009G045700 Sobic007G094801 Sobic007G094801 Sobic008G153600--Sobic007G094801 Sobic008G136200 Sobic008G136200 Sobic008G153600--Sobic008G136200 Sobic008G034600 Sobic008G034600 Sobic008G153600--Sobic008G034600 Sobic009G197200 Sobic009G197200 Sobic008G153600--Sobic009G197200 Sobic008G153600--Sobic009G087800 Sobic008G153600--Sobic004G211400 Sobic003G144400 Sobic003G144400 Sobic008G153600--Sobic003G144400 Sobic007G205800 Sobic007G205800 Sobic008G153600--Sobic007G205800 Sobic002G051450 Sobic002G051450 Sobic009G045700--Sobic002G051450 Sobic006G009400 Sobic006G009400 Sobic009G045700--Sobic006G009400 Sobic006G262200 Sobic006G262200 Sobic009G045700--Sobic006G262200 Sobic009G004700 Sobic009G004700 Sobic009G045700--Sobic009G004700 Sobic010G263800 Sobic010G263800 Sobic009G045700--Sobic010G263800 Sobic010G144100 Sobic010G144100 Sobic009G045700--Sobic010G144100 Sobic009G045700--Sobic008G034600 Sobic002G144966 Sobic002G144966 Sobic009G045700--Sobic002G144966 Sobic009G045700--Sobic008G153600 Sobic003G259901--Sobic006G210100 Sobic002G166500 Sobic002G166500 Sobic003G259901--Sobic002G166500 Sobic005G077466 Sobic005G077466 Sobic003G259901--Sobic005G077466 Sobic006G209850 Sobic006G209850 Sobic003G259901--Sobic006G209850 Sobic003G259901--Sobic002G144933 Sobic009G065100 Sobic009G065100 Sobic003G259901--Sobic009G065100 Sobic006G128900 Sobic006G128900 Sobic003G259901--Sobic006G128900 Sobic001G274200 Sobic001G274200 Sobic003G259901--Sobic001G274200 Sobic003G259901--Sobic006G246900 Sobic009G127900 Sobic009G127900 Sobic004G290800--Sobic009G127900 Sobic001G420200 Sobic001G420200 Sobic004G290800--Sobic001G420200 Sobic007G178700 Sobic007G178700 Sobic004G290800--Sobic007G178700 Sobic004G290800--Sobic007G037900 Sobic004G290800--Sobic003G268300 Sobic004G290800--Sobic001G162300 Sobic004G290800--Sobic002G157000 Sobic001G111900 Sobic001G111900 Sobic004G290800--Sobic001G111900 Sobic001G446900 Sobic001G446900 Sobic004G290800--Sobic001G446900 Sobic009G140500--Sobic001G274200 Sobic001G067850 Sobic001G067850 Sobic009G140500--Sobic001G067850 Sobic010G123901 Sobic010G123901 Sobic009G140500--Sobic010G123901 Sobic009G140500--Sobic007G037900 Sobic009G140500--Sobic004G290800 Sobic009G140500--Sobic001G420200 Sobic003G179201 Sobic003G179201 Sobic009G140500--Sobic003G179201 Sobic002G203200 Sobic002G203200 Sobic009G140500--Sobic002G203200 Sobic007G096600 Sobic007G096600 Sobic009G140500--Sobic007G096600
Octagon: transcription factors


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