Gene annotation
Transcriptome id Sobic.009G143000.3,Sobic.009G143000.1,Sobic.009G143000.4,Sobic.009G143000.2
Synonym Sb09g020810
Functional annotation DUF803 domain containing, putative, expressed
UniProt C5YY73
Pfam PF05653
Panther DB PTHR12570 PTHR12570:SF22
NCBI CDD KOG2922; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015693magnesium ion transport GO:0015095magnesium ion transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT1G71900 : Protein of unknown function (DUF803)
RAP-DB (Rice) LOC_Os05g35060.1 : DUF803 domain containing, putative, expressed
MaizeGDB (Corn) Zm00025a043735 , Zm00025a010579 , Zm00025a026560 , Zm00025a037360
Brachypodium KQJ85527 , KQK06160 , KQK06161
Barley HORVU4Hr1G043800.5 , HORVU3Hr1G091150.7 , HORVU3Hr1G091150.9 , HORVU3Hr1G091150.8 , HORVU4Hr1G043800.6 , HORVU3Hr1G091150.3 , HORVU4Hr1G043800.4 , HORVU4Hr1G043800.3 , HORVU4Hr1G043800.2 , HORVU4Hr1G043800.1 , HORVU3Hr1G091150.6 , HORVU1Hr1G065000.8 , HORVU1Hr1G065000.9 , HORVU1Hr1G065000.6 , HORVU1Hr1G065000.7 , HORVU1Hr1G065000.4 , HORVU1Hr1G065000.5 , HORVU1Hr1G065000.2 , HORVU1Hr1G065000.3 , HORVU1Hr1G065000.1 , HORVU1Hr1G065000.10 , HORVU3Hr1G091150.15 , HORVU3Hr1G091150.14 , HORVU3Hr1G091150.16 , HORVU3Hr1G091150.11 , HORVU3Hr1G091150.10 , HORVU3Hr1G091150.13 , HORVU3Hr1G091150.12
Wheat TraesCS1D02G264900 , TraesCS3D02G402700 , TraesCS3B02G440800 , TraesCS1B02G275400 , TraesCS3A02G407400 , TraesCS3A02G407400 , TraesCS1A02G264700
Populus PNT07876 , PNT07874 , PNT07875


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cDNA sequences
Sobic.009G143000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G084300 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
2 Sobic.003G405700 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
3 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
4 Sobic.009G252800 expressed protein -
5 Sobic.002G272600 TBC domain containing protein, expressed -
6 Sobic.001G439600 26S proteasome non-ATPase regulatory subunit 4, putative, expressed K03029: PSMD4, 26S proteasome regulatory subunit N10
7 Sobic.009G050700 importin subunit alpha, putative, expressed -
8 Sobic.003G101300 expressed protein -
9 Sobic.003G247900 eukaryotic translation initiation factor 3 subunit D, putative, expressed K03251: translation initiation factor 3 subunit D
10 Sobic.009G193400 AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
11 Sobic.006G222400 RNA recognition motif containing protein, putative, expressed -
12 Sobic.007G123900 WD-40 repeat family protein, putative, expressed -
13 Sobic.008G192000 yippee zinc-binding protein, putative, expressed -
14 Sobic.003G416600 mitochondrial carrier protein, putative, expressed K15108: SLC25A19, DNC, solute carrier family 25 (mitochondrial thiamine pyrophosphate transporter), member 19
15 Sobic.010G238700 dynamin family protein, putative, expressed K12483: EH domain-containing protein 1
16 Sobic.006G225300 expressed protein -
17 Sobic.008G046600 bZIP transcription factor domain containing protein, expressed -
18 Sobic.007G160600 CAMK_CAMK_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
19 Sobic.001G105500 heat shock protein DnaJ, putative, expressed -
20 Sobic.002G355000 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@WRKY87, expressed -


Gene co-expression network
sample Sobic009G143000 Sobic009G143000 Sobic002G084300 Sobic002G084300 Sobic009G143000--Sobic002G084300 Sobic003G405700 Sobic003G405700 Sobic009G143000--Sobic003G405700 Sobic001G038100 Sobic001G038100 Sobic009G143000--Sobic001G038100 Sobic009G252800 Sobic009G252800 Sobic009G143000--Sobic009G252800 Sobic002G272600 Sobic002G272600 Sobic009G143000--Sobic002G272600 Sobic001G439600 Sobic001G439600 Sobic009G143000--Sobic001G439600 Sobic009G050700 Sobic009G050700 Sobic009G143000--Sobic009G050700 Sobic003G101300 Sobic003G101300 Sobic009G143000--Sobic003G101300 Sobic003G247900 Sobic003G247900 Sobic009G143000--Sobic003G247900 Sobic001G056200 Sobic001G056200 Sobic002G084300--Sobic001G056200 Sobic004G263900 Sobic004G263900 Sobic002G084300--Sobic004G263900 Sobic008G174300 Sobic008G174300 Sobic002G084300--Sobic008G174300 Sobic002G378200 Sobic002G378200 Sobic002G084300--Sobic002G378200 Sobic001G028400 Sobic001G028400 Sobic002G084300--Sobic001G028400 Sobic001G408700 Sobic001G408700 Sobic002G084300--Sobic001G408700 Sobic001G390500 Sobic001G390500 Sobic002G084300--Sobic001G390500 Sobic003G081000 Sobic003G081000 Sobic002G084300--Sobic003G081000 Sobic009G198100 Sobic009G198100 Sobic002G084300--Sobic009G198100 Sobic004G305600 Sobic004G305600 Sobic003G405700--Sobic004G305600 Sobic001G080000 Sobic001G080000 Sobic003G405700--Sobic001G080000 Sobic006G183000 Sobic006G183000 Sobic003G405700--Sobic006G183000 Sobic002G129000 Sobic002G129000 Sobic003G405700--Sobic002G129000 Sobic010G105600 Sobic010G105600 Sobic003G405700--Sobic010G105600 Sobic003G405700--Sobic009G050700 Sobic001G136900 Sobic001G136900 Sobic003G405700--Sobic001G136900 Sobic004G059000 Sobic004G059000 Sobic003G405700--Sobic004G059000 Sobic003G405700--Sobic002G272600 Sobic002G204000 Sobic002G204000 Sobic001G038100--Sobic002G204000 Sobic001G309100 Sobic001G309100 Sobic001G038100--Sobic001G309100 Sobic001G507400 Sobic001G507400 Sobic001G038100--Sobic001G507400 Sobic006G120800 Sobic006G120800 Sobic001G038100--Sobic006G120800 Sobic007G117100 Sobic007G117100 Sobic001G038100--Sobic007G117100 Sobic003G420700 Sobic003G420700 Sobic001G038100--Sobic003G420700 Sobic004G186000 Sobic004G186000 Sobic001G038100--Sobic004G186000 Sobic006G261100 Sobic006G261100 Sobic001G038100--Sobic006G261100 Sobic004G260400 Sobic004G260400 Sobic001G038100--Sobic004G260400 Sobic008G142700 Sobic008G142700 Sobic009G252800--Sobic008G142700 Sobic007G038800 Sobic007G038800 Sobic009G252800--Sobic007G038800 Sobic006G002500 Sobic006G002500 Sobic009G252800--Sobic006G002500 Sobic010G071200 Sobic010G071200 Sobic009G252800--Sobic010G071200 Sobic009G171700 Sobic009G171700 Sobic009G252800--Sobic009G171700 Sobic003G361500 Sobic003G361500 Sobic009G252800--Sobic003G361500 Sobic009G252800--Sobic001G136900 Sobic004G316900 Sobic004G316900 Sobic009G252800--Sobic004G316900 Sobic010G055500 Sobic010G055500 Sobic009G252800--Sobic010G055500 Sobic001G061700 Sobic001G061700 Sobic002G272600--Sobic001G061700 Sobic002G272600--Sobic001G080000 Sobic001G143500 Sobic001G143500 Sobic002G272600--Sobic001G143500 Sobic002G272600--Sobic003G405700 Sobic002G272600--Sobic010G105600 Sobic007G205000 Sobic007G205000 Sobic002G272600--Sobic007G205000 Sobic003G038600 Sobic003G038600 Sobic002G272600--Sobic003G038600 Sobic003G350600 Sobic003G350600 Sobic002G272600--Sobic003G350600 Sobic010G219100 Sobic010G219100 Sobic002G272600--Sobic010G219100 Sobic003G124800 Sobic003G124800 Sobic001G439600--Sobic003G124800 Sobic001G439600--Sobic002G129000 Sobic010G083700 Sobic010G083700 Sobic001G439600--Sobic010G083700 Sobic001G294900 Sobic001G294900 Sobic001G439600--Sobic001G294900 Sobic001G439600--Sobic001G136900 Sobic001G054200 Sobic001G054200 Sobic001G439600--Sobic001G054200 Sobic010G168600 Sobic010G168600 Sobic001G439600--Sobic010G168600 Sobic002G256300 Sobic002G256300 Sobic001G439600--Sobic002G256300 Sobic001G529000 Sobic001G529000 Sobic001G439600--Sobic001G529000 Sobic009G050700--Sobic002G129000 Sobic009G050700--Sobic006G183000 Sobic009G050700--Sobic003G405700 Sobic006G278700 Sobic006G278700 Sobic009G050700--Sobic006G278700 Sobic006G101700 Sobic006G101700 Sobic009G050700--Sobic006G101700 Sobic004G356900 Sobic004G356900 Sobic009G050700--Sobic004G356900 Sobic006G225300 Sobic006G225300 Sobic009G050700--Sobic006G225300 Sobic003G226500 Sobic003G226500 Sobic009G050700--Sobic003G226500 Sobic001G085100 Sobic001G085100 Sobic009G050700--Sobic001G085100 Sobic003G101300--Sobic001G309100 Sobic010G211300 Sobic010G211300 Sobic003G101300--Sobic010G211300 Sobic009G034400 Sobic009G034400 Sobic003G101300--Sobic009G034400 Sobic003G101300--Sobic001G028400 Sobic003G101300--Sobic010G071200 Sobic004G349100 Sobic004G349100 Sobic003G101300--Sobic004G349100 Sobic003G024800 Sobic003G024800 Sobic003G101300--Sobic003G024800 Sobic009G036900 Sobic009G036900 Sobic003G101300--Sobic009G036900 Sobic001G424500 Sobic001G424500 Sobic003G101300--Sobic001G424500 Sobic003G247900--Sobic003G038600 Sobic003G247900--Sobic010G219100 Sobic003G247900--Sobic001G507400 Sobic008G111700 Sobic008G111700 Sobic003G247900--Sobic008G111700 Sobic001G285300 Sobic001G285300 Sobic003G247900--Sobic001G285300 Sobic001G532100 Sobic001G532100 Sobic003G247900--Sobic001G532100 Sobic003G247900--Sobic002G272600 Sobic006G094600 Sobic006G094600 Sobic003G247900--Sobic006G094600 Sobic002G077900 Sobic002G077900 Sobic003G247900--Sobic002G077900
Octagon: transcription factors


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