Gene annotation
Transcriptome id Sobic.009G249100.1
Synonym Sb09g029960
Functional annotation CPuORF17 - conserved peptide uORF-containing transcript, expressed
UniProt C5YWJ6
Pfam -
Panther DB PTHR31827 PTHR31827:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64140 : -
RAP-DB (Rice) LOC_Os01g43370.1 : CPuORF17 - conserved peptide uORF-containing transcript, expressed
MaizeGDB (Corn) Zm00025a028382
Brachypodium PNT72412 , PNT72413 , KQK08788 , KQK08789
Barley HORVU3Hr1G055650.2 , HORVU3Hr1G055650.3 , HORVU3Hr1G055650.1 , HORVU3Hr1G055650.6 , HORVU3Hr1G055650.7 , HORVU3Hr1G055650.4 , HORVU3Hr1G055650.5 , HORVU3Hr1G055650.8 , HORVU3Hr1G055650.9
Wheat -
Populus -


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cDNA sequences
Sobic.009G249100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G071000 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
2 Sobic.001G283200 proteasome subunit, putative, expressed K03039: PSMD13, 26S proteasome regulatory subunit N9
3 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
4 Sobic.007G079300 proteasome/cyclosome repeat containing protein, expressed K03032: PSMD1, 26S proteasome regulatory subunit N2
5 Sobic.001G022800 actin, putative, expressed K10355: actin, other eukaryote
6 Sobic.008G004400 GIL1, putative, expressed -
7 Sobic.001G078800 similar to Serine/threonine-protein kinase SAPK8(PubMedID : 29862293)@CAMK_CAMK_like.22 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
8 Sobic.004G082900 26S protease regulatory subunit, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4
9 Sobic.001G085100 expressed protein -
10 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5
11 Sobic.003G261400 DUF292 domain containing protein, expressed -
12 Sobic.002G341800 eukaryotic translation initiation factor 2 subunit gamma, putative, expressed K03242: translation initiation factor 2 subunit 3
13 Sobic.009G222500 expressed protein -
14 Sobic.006G101700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
15 Sobic.004G356900 - K13025: EIF4A3, ATP-dependent RNA helicase
16 Sobic.003G372000 proton-dependent oligopeptide transport, putative, expressed -
17 Sobic.008G004600 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
18 Sobic.006G010000 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
19 Sobic.010G269100 zinc finger family protein, putative, expressed -
20 Sobic.003G259400 katanin p60 ATPase-containing subunit, putative, expressed K07767: katanin p60 ATPase-containing subunit A1


Gene co-expression network
sample Sobic009G249100 Sobic009G249100 Sobic002G071000 Sobic002G071000 Sobic009G249100--Sobic002G071000 Sobic001G283200 Sobic001G283200 Sobic009G249100--Sobic001G283200 Sobic001G458700 Sobic001G458700 Sobic009G249100--Sobic001G458700 Sobic007G079300 Sobic007G079300 Sobic009G249100--Sobic007G079300 Sobic001G022800 Sobic001G022800 Sobic009G249100--Sobic001G022800 Sobic008G004400 Sobic008G004400 Sobic009G249100--Sobic008G004400 Sobic001G078800 Sobic001G078800 Sobic009G249100--Sobic001G078800 Sobic004G082900 Sobic004G082900 Sobic009G249100--Sobic004G082900 Sobic001G085100 Sobic001G085100 Sobic009G249100--Sobic001G085100 Sobic002G071000--Sobic007G079300 Sobic001G234200 Sobic001G234200 Sobic002G071000--Sobic001G234200 Sobic004G348900 Sobic004G348900 Sobic002G071000--Sobic004G348900 Sobic006G010000 Sobic006G010000 Sobic002G071000--Sobic006G010000 Sobic002G071000--Sobic009G249100 Sobic003G293300 Sobic003G293300 Sobic002G071000--Sobic003G293300 Sobic003G117300 Sobic003G117300 Sobic002G071000--Sobic003G117300 Sobic002G071000--Sobic004G082900 Sobic006G049700 Sobic006G049700 Sobic002G071000--Sobic006G049700 Sobic001G283200--Sobic001G458700 Sobic003G261400 Sobic003G261400 Sobic001G283200--Sobic003G261400 Sobic006G252200 Sobic006G252200 Sobic001G283200--Sobic006G252200 Sobic001G033500 Sobic001G033500 Sobic001G283200--Sobic001G033500 Sobic001G283200--Sobic004G348900 Sobic004G181900 Sobic004G181900 Sobic001G283200--Sobic004G181900 Sobic003G349300 Sobic003G349300 Sobic001G283200--Sobic003G349300 Sobic007G176200 Sobic007G176200 Sobic001G283200--Sobic007G176200 Sobic001G283200--Sobic004G082900 Sobic001G458700--Sobic007G176200 Sobic001G458700--Sobic006G252200 Sobic001G010700 Sobic001G010700 Sobic001G458700--Sobic001G010700 Sobic002G341800 Sobic002G341800 Sobic001G458700--Sobic002G341800 Sobic004G224900 Sobic004G224900 Sobic001G458700--Sobic004G224900 Sobic003G330500 Sobic003G330500 Sobic001G458700--Sobic003G330500 Sobic001G458700--Sobic001G283200 Sobic001G502200 Sobic001G502200 Sobic001G458700--Sobic001G502200 Sobic004G081800 Sobic004G081800 Sobic001G458700--Sobic004G081800 Sobic007G079300--Sobic002G071000 Sobic007G079300--Sobic004G348900 Sobic007G079300--Sobic001G283200 Sobic007G079300--Sobic001G234200 Sobic001G206900 Sobic001G206900 Sobic007G079300--Sobic001G206900 Sobic007G079300--Sobic004G082900 Sobic001G444300 Sobic001G444300 Sobic007G079300--Sobic001G444300 Sobic002G020700 Sobic002G020700 Sobic007G079300--Sobic002G020700 Sobic001G014800 Sobic001G014800 Sobic007G079300--Sobic001G014800 Sobic001G022800--Sobic001G283200 Sobic004G275700 Sobic004G275700 Sobic001G022800--Sobic004G275700 Sobic004G132300 Sobic004G132300 Sobic001G022800--Sobic004G132300 Sobic001G022800--Sobic009G249100 Sobic001G022800--Sobic003G261400 Sobic001G109300 Sobic001G109300 Sobic001G022800--Sobic001G109300 Sobic007G136100 Sobic007G136100 Sobic001G022800--Sobic007G136100 Sobic002G226900 Sobic002G226900 Sobic001G022800--Sobic002G226900 Sobic009G005900 Sobic009G005900 Sobic001G022800--Sobic009G005900 Sobic004G356900 Sobic004G356900 Sobic008G004400--Sobic004G356900 Sobic006G278700 Sobic006G278700 Sobic008G004400--Sobic006G278700 Sobic001G143500 Sobic001G143500 Sobic008G004400--Sobic001G143500 Sobic007G053500 Sobic007G053500 Sobic008G004400--Sobic007G053500 Sobic006G101700 Sobic006G101700 Sobic008G004400--Sobic006G101700 Sobic003G439800 Sobic003G439800 Sobic008G004400--Sobic003G439800 Sobic002G281300 Sobic002G281300 Sobic008G004400--Sobic002G281300 Sobic005G004200 Sobic005G004200 Sobic008G004400--Sobic005G004200 Sobic001G360200 Sobic001G360200 Sobic008G004400--Sobic001G360200 Sobic001G078800--Sobic003G261400 Sobic010G205300 Sobic010G205300 Sobic001G078800--Sobic010G205300 Sobic010G057900 Sobic010G057900 Sobic001G078800--Sobic010G057900 Sobic002G400000 Sobic002G400000 Sobic001G078800--Sobic002G400000 Sobic001G078800--Sobic001G085100 Sobic007G168600 Sobic007G168600 Sobic001G078800--Sobic007G168600 Sobic001G078800--Sobic001G206900 Sobic001G051200 Sobic001G051200 Sobic001G078800--Sobic001G051200 Sobic003G077900 Sobic003G077900 Sobic001G078800--Sobic003G077900 Sobic004G082900--Sobic006G252200 Sobic004G082900--Sobic001G283200 Sobic004G082900--Sobic001G458700 Sobic004G010900 Sobic004G010900 Sobic004G082900--Sobic004G010900 Sobic004G082900--Sobic007G176200 Sobic005G105500 Sobic005G105500 Sobic004G082900--Sobic005G105500 Sobic001G145500 Sobic001G145500 Sobic004G082900--Sobic001G145500 Sobic009G149500 Sobic009G149500 Sobic004G082900--Sobic009G149500 Sobic004G082900--Sobic001G444300 Sobic001G085100--Sobic006G101700 Sobic001G261436 Sobic001G261436 Sobic001G085100--Sobic001G261436 Sobic006G148200 Sobic006G148200 Sobic001G085100--Sobic006G148200 Sobic007G167900 Sobic007G167900 Sobic001G085100--Sobic007G167900 Sobic001G085100--Sobic001G206900 Sobic001G047400 Sobic001G047400 Sobic001G085100--Sobic001G047400 Sobic004G066200 Sobic004G066200 Sobic001G085100--Sobic004G066200 Sobic001G091300 Sobic001G091300 Sobic001G085100--Sobic001G091300 Sobic003G012200 Sobic003G012200 Sobic001G085100--Sobic003G012200
Octagon: transcription factors


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