Gene annotation
Transcriptome id Sobic.010G015800.2,Sobic.010G015800.1
Synonym Sb10g001550, BB, BB2
Functional annotation zinc RING finger protein, putative, expressed
UniProt A0A194YHT4 , A0A194YGS1
Pfam PF13639
Panther DB PTHR14155 PTHR14155:SF108
NCBI CDD KOG1493; Anaphase-promoting complex (APC), subunit 11
KEGG Orthology K19045; E3 ubiquitin-protein ligase BIG BROTHER and related proteins
Gene Ontology GO:0008270; zinc ion binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT3G63530 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os06g03580.2 : zinc RING finger protein, putative, expressed
MaizeGDB (Corn) Zm00025a050227 , Zm00025a041333
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G122200 cadmium tolerance factor, putative, expressed -
2 Sobic.002G301600 amidase, putative, expressed K01426: E3.5.1.4, amidase
3 Sobic.002G301700 amidase, putative, expressed K01426: E3.5.1.4, amidase
4 Sobic.010G019700 cytochrome P450 86A1, putative, expressed -
5 Sobic.005G154100 OsWAK98 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
6 Sobic.005G076500 RGH1A, putative, expressed -
7 Sobic.006G201700 wall-associated kinase 1, putative, expressed -
8 Sobic.008G099600 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
9 Sobic.006G010800 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
10 Sobic.001G420300 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
11 Sobic.001G215600 cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
12 Sobic.009G190500 calreticulin precursor protein, putative, expressed K08057: calreticulin
13 Sobic.008G104801 - -
14 Sobic.008G014100 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
15 Sobic.004G073500 "domain confirmed by Pfam database, expressed in leaf, flower and root, expression induced by BR treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
16 Sobic.001G327900 SHR, putative, expressed -
17 Sobic.010G132700 - -
18 Sobic.003G069100 regulator of ribonuclease, putative, expressed -
19 Sobic.002G303100 NBS-LRR disease resistance protein, putative, expressed -
20 Sobic.008G067200 inhibitor I family protein, putative, expressed -


Gene co-expression network
sample Sobic010G015800 Sobic010G015800 Sobic010G122200 Sobic010G122200 Sobic010G015800--Sobic010G122200 Sobic002G301600 Sobic002G301600 Sobic010G015800--Sobic002G301600 Sobic002G301700 Sobic002G301700 Sobic010G015800--Sobic002G301700 Sobic010G019700 Sobic010G019700 Sobic010G015800--Sobic010G019700 Sobic005G154100 Sobic005G154100 Sobic010G015800--Sobic005G154100 Sobic005G076500 Sobic005G076500 Sobic010G015800--Sobic005G076500 Sobic006G201700 Sobic006G201700 Sobic010G015800--Sobic006G201700 Sobic008G099600 Sobic008G099600 Sobic010G015800--Sobic008G099600 Sobic006G010800 Sobic006G010800 Sobic010G015800--Sobic006G010800 Sobic002G303100 Sobic002G303100 Sobic010G122200--Sobic002G303100 Sobic010G122200--Sobic010G015800 Sobic002G317800 Sobic002G317800 Sobic010G122200--Sobic002G317800 Sobic008G064601 Sobic008G064601 Sobic010G122200--Sobic008G064601 Sobic010G122200--Sobic006G201700 Sobic001G131100 Sobic001G131100 Sobic010G122200--Sobic001G131100 Sobic005G096000 Sobic005G096000 Sobic010G122200--Sobic005G096000 Sobic005G194900 Sobic005G194900 Sobic010G122200--Sobic005G194900 Sobic008G107300 Sobic008G107300 Sobic010G122200--Sobic008G107300 Sobic002G301600--Sobic002G301700 Sobic005G084000 Sobic005G084000 Sobic002G301600--Sobic005G084000 Sobic002G301600--Sobic010G015800 Sobic007G059500 Sobic007G059500 Sobic002G301600--Sobic007G059500 Sobic002G301600--Sobic006G010800 Sobic008G104801 Sobic008G104801 Sobic002G301600--Sobic008G104801 Sobic008G117800 Sobic008G117800 Sobic002G301600--Sobic008G117800 Sobic001G420300 Sobic001G420300 Sobic002G301600--Sobic001G420300 Sobic008G151000 Sobic008G151000 Sobic002G301600--Sobic008G151000 Sobic004G023200 Sobic004G023200 Sobic002G301700--Sobic004G023200 Sobic002G033800 Sobic002G033800 Sobic002G301700--Sobic002G033800 Sobic002G301700--Sobic010G019700 Sobic002G301700--Sobic002G301600 Sobic001G379700 Sobic001G379700 Sobic002G301700--Sobic001G379700 Sobic001G308800 Sobic001G308800 Sobic002G301700--Sobic001G308800 Sobic001G527000 Sobic001G527000 Sobic002G301700--Sobic001G527000 Sobic010G208400 Sobic010G208400 Sobic002G301700--Sobic010G208400 Sobic002G353300 Sobic002G353300 Sobic002G301700--Sobic002G353300 Sobic009G196800 Sobic009G196800 Sobic010G019700--Sobic009G196800 Sobic010G019700--Sobic004G023200 Sobic004G026300 Sobic004G026300 Sobic010G019700--Sobic004G026300 Sobic003G069100 Sobic003G069100 Sobic010G019700--Sobic003G069100 Sobic002G098800 Sobic002G098800 Sobic010G019700--Sobic002G098800 Sobic007G171600 Sobic007G171600 Sobic010G019700--Sobic007G171600 Sobic003G199800 Sobic003G199800 Sobic010G019700--Sobic003G199800 Sobic001G069000 Sobic001G069000 Sobic010G019700--Sobic001G069000 Sobic002G180400 Sobic002G180400 Sobic010G019700--Sobic002G180400 Sobic005G154100--Sobic010G015800 Sobic005G154100--Sobic002G303100 Sobic005G154100--Sobic006G201700 Sobic005G154100--Sobic010G122200 Sobic001G327900 Sobic001G327900 Sobic005G154100--Sobic001G327900 Sobic007G194700 Sobic007G194700 Sobic005G154100--Sobic007G194700 Sobic007G058200 Sobic007G058200 Sobic005G154100--Sobic007G058200 Sobic001G301500 Sobic001G301500 Sobic005G154100--Sobic001G301500 Sobic005G154100--Sobic008G099600 Sobic005G076500--Sobic010G015800 Sobic009G033100 Sobic009G033100 Sobic005G076500--Sobic009G033100 Sobic005G076500--Sobic008G099600 Sobic010G019800 Sobic010G019800 Sobic005G076500--Sobic010G019800 Sobic005G076500--Sobic002G303100 Sobic005G076500--Sobic005G096000 Sobic005G076500--Sobic006G201700 Sobic005G076500--Sobic010G122200 Sobic010G123400 Sobic010G123400 Sobic005G076500--Sobic010G123400 Sobic006G201700--Sobic008G099600 Sobic006G201700--Sobic010G015800 Sobic006G021900 Sobic006G021900 Sobic006G201700--Sobic006G021900 Sobic007G089900 Sobic007G089900 Sobic006G201700--Sobic007G089900 Sobic006G201700--Sobic010G122200 Sobic006G201700--Sobic005G154100 Sobic009G190500 Sobic009G190500 Sobic006G201700--Sobic009G190500 Sobic002G067300 Sobic002G067300 Sobic006G201700--Sobic002G067300 Sobic004G323900 Sobic004G323900 Sobic006G201700--Sobic004G323900 Sobic001G278500 Sobic001G278500 Sobic008G099600--Sobic001G278500 Sobic005G069000 Sobic005G069000 Sobic008G099600--Sobic005G069000 Sobic008G099600--Sobic001G327900 Sobic008G099232 Sobic008G099232 Sobic008G099600--Sobic008G099232 Sobic008G099600--Sobic006G201700 Sobic008G099300 Sobic008G099300 Sobic008G099600--Sobic008G099300 Sobic003G428800 Sobic003G428800 Sobic008G099600--Sobic003G428800 Sobic009G225800 Sobic009G225800 Sobic008G099600--Sobic009G225800 Sobic008G079800 Sobic008G079800 Sobic008G099600--Sobic008G079800 Sobic010G241300 Sobic010G241300 Sobic006G010800--Sobic010G241300 Sobic006G010800--Sobic009G190500 Sobic001G240800 Sobic001G240800 Sobic006G010800--Sobic001G240800 Sobic007G213300 Sobic007G213300 Sobic006G010800--Sobic007G213300 Sobic010G225600 Sobic010G225600 Sobic006G010800--Sobic010G225600 Sobic007G129201 Sobic007G129201 Sobic006G010800--Sobic007G129201 Sobic009G084500 Sobic009G084500 Sobic006G010800--Sobic009G084500 Sobic009G034600 Sobic009G034600 Sobic006G010800--Sobic009G034600 Sobic006G010800--Sobic007G059500
Octagon: transcription factors


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