Gene annotation
Transcriptome id Sobic.010G076000.1
Synonym Sb10g006596
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A194YIX6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g10130.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G075900 - -
2 Sobic.003G107600 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
3 Sobic.004G252400 ASC1-like protein 2 (Os)(PubMedID : 27208977)@ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
4 Sobic.005G195100 expressed protein -
5 Sobic.005G195200 expressed protein -
6 Sobic.003G248600 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
7 Sobic.003G275100 green ripe-like, putative, expressed -
8 Sobic.006G106800 - -
9 Sobic.001G048832 - -
10 Sobic.005G092800 expressed protein -
11 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
12 Sobic.002G122700 expressed protein -
13 Sobic.002G155500 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
14 Sobic.010G186200 OsFBL30 - F-box domain and LRR containing protein, expressed K14515: EIN3-binding F-box protein
15 Sobic.006G211200 expressed protein -
16 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
17 Sobic.002G261800 snRK1-interacting protein 1, putative, expressed -
18 Sobic.009G230100 expressed protein -
19 Sobic.003G321700 KH domain containing protein, putative, expressed K11884: PNO1, RNA-binding protein PNO1
20 Sobic.002G180600 expressed protein K17968: TRIAP1, TRIAP1/MDM35 family protein


Gene co-expression network
sample Sobic010G076000 Sobic010G076000 Sobic010G075900 Sobic010G075900 Sobic010G076000--Sobic010G075900 Sobic003G107600 Sobic003G107600 Sobic010G076000--Sobic003G107600 Sobic004G252400 Sobic004G252400 Sobic010G076000--Sobic004G252400 Sobic005G195100 Sobic005G195100 Sobic010G076000--Sobic005G195100 Sobic005G195200 Sobic005G195200 Sobic010G076000--Sobic005G195200 Sobic003G248600 Sobic003G248600 Sobic010G076000--Sobic003G248600 Sobic003G275100 Sobic003G275100 Sobic010G076000--Sobic003G275100 Sobic006G106800 Sobic006G106800 Sobic010G076000--Sobic006G106800 Sobic001G048832 Sobic001G048832 Sobic010G076000--Sobic001G048832 Sobic010G075900--Sobic010G076000 Sobic003G117900 Sobic003G117900 Sobic010G075900--Sobic003G117900 Sobic003G333400 Sobic003G333400 Sobic010G075900--Sobic003G333400 Sobic001G401300 Sobic001G401300 Sobic010G075900--Sobic001G401300 Sobic001G393800 Sobic001G393800 Sobic010G075900--Sobic001G393800 Sobic010G075900--Sobic005G195200 Sobic004G167400 Sobic004G167400 Sobic010G075900--Sobic004G167400 Sobic010G075900--Sobic001G048832 Sobic003G323600 Sobic003G323600 Sobic010G075900--Sobic003G323600 Sobic010G182600 Sobic010G182600 Sobic003G107600--Sobic010G182600 Sobic002G259000 Sobic002G259000 Sobic003G107600--Sobic002G259000 Sobic010G173100 Sobic010G173100 Sobic003G107600--Sobic010G173100 Sobic002G258800 Sobic002G258800 Sobic003G107600--Sobic002G258800 Sobic004G152400 Sobic004G152400 Sobic003G107600--Sobic004G152400 Sobic010G259900 Sobic010G259900 Sobic003G107600--Sobic010G259900 Sobic010G260100 Sobic010G260100 Sobic003G107600--Sobic010G260100 Sobic001G046300 Sobic001G046300 Sobic003G107600--Sobic001G046300 Sobic010G182300 Sobic010G182300 Sobic003G107600--Sobic010G182300 Sobic002G233100 Sobic002G233100 Sobic004G252400--Sobic002G233100 Sobic007G161400 Sobic007G161400 Sobic004G252400--Sobic007G161400 Sobic003G436800 Sobic003G436800 Sobic004G252400--Sobic003G436800 Sobic006G059700 Sobic006G059700 Sobic004G252400--Sobic006G059700 Sobic005G043000 Sobic005G043000 Sobic004G252400--Sobic005G043000 Sobic002G196100 Sobic002G196100 Sobic004G252400--Sobic002G196100 Sobic010G071900 Sobic010G071900 Sobic004G252400--Sobic010G071900 Sobic002G312900 Sobic002G312900 Sobic004G252400--Sobic002G312900 Sobic010G272300 Sobic010G272300 Sobic004G252400--Sobic010G272300 Sobic002G180600 Sobic002G180600 Sobic005G195100--Sobic002G180600 Sobic005G195100--Sobic005G195200 Sobic003G228000 Sobic003G228000 Sobic005G195100--Sobic003G228000 Sobic001G329100 Sobic001G329100 Sobic005G195100--Sobic001G329100 Sobic002G291300 Sobic002G291300 Sobic005G195100--Sobic002G291300 Sobic004G293700 Sobic004G293700 Sobic005G195100--Sobic004G293700 Sobic005G195100--Sobic010G071900 Sobic010G121300 Sobic010G121300 Sobic005G195100--Sobic010G121300 Sobic002G212200 Sobic002G212200 Sobic005G195100--Sobic002G212200 Sobic005G195200--Sobic001G329100 Sobic005G195200--Sobic005G195100 Sobic005G195200--Sobic002G180600 Sobic004G183400 Sobic004G183400 Sobic005G195200--Sobic004G183400 Sobic006G254800 Sobic006G254800 Sobic005G195200--Sobic006G254800 Sobic007G062600 Sobic007G062600 Sobic005G195200--Sobic007G062600 Sobic002G122700 Sobic002G122700 Sobic005G195200--Sobic002G122700 Sobic010G253800 Sobic010G253800 Sobic005G195200--Sobic010G253800 Sobic006G225600 Sobic006G225600 Sobic005G195200--Sobic006G225600 Sobic003G220600 Sobic003G220600 Sobic003G248600--Sobic003G220600 Sobic007G186300 Sobic007G186300 Sobic003G248600--Sobic007G186300 Sobic007G045600 Sobic007G045600 Sobic003G248600--Sobic007G045600 Sobic005G176000 Sobic005G176000 Sobic003G248600--Sobic005G176000 Sobic004G321900 Sobic004G321900 Sobic003G248600--Sobic004G321900 Sobic001G403700 Sobic001G403700 Sobic003G248600--Sobic001G403700 Sobic009G146100 Sobic009G146100 Sobic003G248600--Sobic009G146100 Sobic002G296300 Sobic002G296300 Sobic003G248600--Sobic002G296300 Sobic001G073000 Sobic001G073000 Sobic003G248600--Sobic001G073000 Sobic010G186200 Sobic010G186200 Sobic003G275100--Sobic010G186200 Sobic003G275100--Sobic004G293700 Sobic003G253000 Sobic003G253000 Sobic003G275100--Sobic003G253000 Sobic002G264400 Sobic002G264400 Sobic003G275100--Sobic002G264400 Sobic001G124600 Sobic001G124600 Sobic003G275100--Sobic001G124600 Sobic002G202300 Sobic002G202300 Sobic003G275100--Sobic002G202300 Sobic003G275100--Sobic002G180600 Sobic010G243200 Sobic010G243200 Sobic003G275100--Sobic010G243200 Sobic003G275100--Sobic003G220600 Sobic005G092900 Sobic005G092900 Sobic006G106800--Sobic005G092900 Sobic009G077800 Sobic009G077800 Sobic006G106800--Sobic009G077800 Sobic002G353900 Sobic002G353900 Sobic006G106800--Sobic002G353900 Sobic001G400700 Sobic001G400700 Sobic006G106800--Sobic001G400700 Sobic009G143400 Sobic009G143400 Sobic006G106800--Sobic009G143400 Sobic009G139400 Sobic009G139400 Sobic006G106800--Sobic009G139400 Sobic004G101300 Sobic004G101300 Sobic006G106800--Sobic004G101300 Sobic003G393700 Sobic003G393700 Sobic006G106800--Sobic003G393700 Sobic004G050000 Sobic004G050000 Sobic006G106800--Sobic004G050000 Sobic010G154700 Sobic010G154700 Sobic001G048832--Sobic010G154700 Sobic001G132100 Sobic001G132100 Sobic001G048832--Sobic001G132100 Sobic007G051000 Sobic007G051000 Sobic001G048832--Sobic007G051000 Sobic009G176000 Sobic009G176000 Sobic001G048832--Sobic009G176000 Sobic005G188100 Sobic005G188100 Sobic001G048832--Sobic005G188100 Sobic002G190900 Sobic002G190900 Sobic001G048832--Sobic002G190900 Sobic009G119900 Sobic009G119900 Sobic001G048832--Sobic009G119900 Sobic004G272800 Sobic004G272800 Sobic001G048832--Sobic004G272800 Sobic002G398901 Sobic002G398901 Sobic001G048832--Sobic002G398901
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.