Gene annotation
Transcriptome id Sobic.010G186200.1
Synonym FBL6, EBF1
Functional annotation OsFBL30 - F-box domain and LRR containing protein, expressed
UniProt C5Z5P5
Pfam -
Panther DB PTHR24006 PTHR24006:SF501
NCBI CDD KOG1947; Leucine rich repeat proteins, some proteins contain F-box
KEGG Orthology K14515; EIN3-binding F-box protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G25490 : EIN3-binding F box protein 1
RAP-DB (Rice) LOC_Os06g40360.1 : OsFBL30 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) Zm00025a051315 , Zm00025a019561 , Zm00025a042220
Brachypodium KQJ93906 , KQK17750
Barley HORVU7Hr1G090240.1 , HORVU6Hr1G038430.2 , HORVU6Hr1G038430.3 , HORVU6Hr1G038430.1
Wheat TraesCS7A02G377500 , TraesCS6A02G181900 , TraesCS6B02G210700 , TraesCS7D02G373800 , TraesCS6D02G169200 , TraesCS7B02G278800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G477600 zinc finger protein, putative, expressed -
2 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
3 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
4 Sobic.003G393700 zinc finger, RING-type, putative, expressed -
5 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
6 Sobic.001G281400 expressed protein -
7 Sobic.009G139400 expressed protein -
8 Sobic.004G187900 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
9 Sobic.001G124600 - -
10 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
11 Sobic.003G113700 expressed protein -
12 Sobic.009G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
13 Sobic.009G077800 expressed protein -
14 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
15 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -
16 Sobic.009G234100 WRKY49, expressed -
17 Sobic.005G195301 - K02980: RP-S29e, small subunit ribosomal protein S29e
18 Sobic.010G086200 GRAM domain containing protein, expressed -
19 Sobic.002G190900 expressed protein -
20 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -


Gene co-expression network
sample Sobic010G186200 Sobic010G186200 Sobic001G477600 Sobic001G477600 Sobic010G186200--Sobic001G477600 Sobic002G345300 Sobic002G345300 Sobic010G186200--Sobic002G345300 Sobic002G046100 Sobic002G046100 Sobic010G186200--Sobic002G046100 Sobic003G393700 Sobic003G393700 Sobic010G186200--Sobic003G393700 Sobic003G350300 Sobic003G350300 Sobic010G186200--Sobic003G350300 Sobic001G281400 Sobic001G281400 Sobic010G186200--Sobic001G281400 Sobic009G139400 Sobic009G139400 Sobic010G186200--Sobic009G139400 Sobic004G187900 Sobic004G187900 Sobic010G186200--Sobic004G187900 Sobic001G124600 Sobic001G124600 Sobic010G186200--Sobic001G124600 Sobic001G138600 Sobic001G138600 Sobic001G477600--Sobic001G138600 Sobic001G112200 Sobic001G112200 Sobic001G477600--Sobic001G112200 Sobic003G369100 Sobic003G369100 Sobic001G477600--Sobic003G369100 Sobic002G336600 Sobic002G336600 Sobic001G477600--Sobic002G336600 Sobic003G382800 Sobic003G382800 Sobic001G477600--Sobic003G382800 Sobic007G074000 Sobic007G074000 Sobic001G477600--Sobic007G074000 Sobic003G345100 Sobic003G345100 Sobic001G477600--Sobic003G345100 Sobic005G099000 Sobic005G099000 Sobic001G477600--Sobic005G099000 Sobic004G141200 Sobic004G141200 Sobic001G477600--Sobic004G141200 Sobic002G345300--Sobic002G046100 Sobic002G345300--Sobic003G350300 Sobic002G345300--Sobic001G281400 Sobic010G178200 Sobic010G178200 Sobic002G345300--Sobic010G178200 Sobic002G267500 Sobic002G267500 Sobic002G345300--Sobic002G267500 Sobic003G253000 Sobic003G253000 Sobic002G345300--Sobic003G253000 Sobic003G285800 Sobic003G285800 Sobic002G345300--Sobic003G285800 Sobic004G272800 Sobic004G272800 Sobic002G345300--Sobic004G272800 Sobic010G149300 Sobic010G149300 Sobic002G345300--Sobic010G149300 Sobic002G046100--Sobic003G285800 Sobic002G046100--Sobic001G281400 Sobic002G046100--Sobic002G345300 Sobic002G187500 Sobic002G187500 Sobic002G046100--Sobic002G187500 Sobic010G086200 Sobic010G086200 Sobic002G046100--Sobic010G086200 Sobic004G061200 Sobic004G061200 Sobic002G046100--Sobic004G061200 Sobic001G477300 Sobic001G477300 Sobic002G046100--Sobic001G477300 Sobic002G046100--Sobic002G267500 Sobic002G190900 Sobic002G190900 Sobic002G046100--Sobic002G190900 Sobic009G077800 Sobic009G077800 Sobic003G393700--Sobic009G077800 Sobic001G070800 Sobic001G070800 Sobic003G393700--Sobic001G070800 Sobic009G234100 Sobic009G234100 Sobic003G393700--Sobic009G234100 Sobic003G393700--Sobic009G139400 Sobic004G321300 Sobic004G321300 Sobic003G393700--Sobic004G321300 Sobic003G297600 Sobic003G297600 Sobic003G393700--Sobic003G297600 Sobic002G393000 Sobic002G393000 Sobic003G393700--Sobic002G393000 Sobic003G393700--Sobic004G061200 Sobic001G177800 Sobic001G177800 Sobic003G393700--Sobic001G177800 Sobic003G350300--Sobic004G187900 Sobic003G350300--Sobic002G345300 Sobic003G350300--Sobic002G046100 Sobic003G350300--Sobic003G285800 Sobic003G350300--Sobic001G281400 Sobic003G350300--Sobic004G321300 Sobic010G274900 Sobic010G274900 Sobic003G350300--Sobic010G274900 Sobic003G350300--Sobic010G086200 Sobic003G181500 Sobic003G181500 Sobic003G350300--Sobic003G181500 Sobic001G281400--Sobic004G187900 Sobic001G281400--Sobic002G267500 Sobic001G281400--Sobic010G149300 Sobic001G281400--Sobic002G190900 Sobic001G281400--Sobic002G046100 Sobic001G281400--Sobic010G086200 Sobic009G141800 Sobic009G141800 Sobic001G281400--Sobic009G141800 Sobic009G008900 Sobic009G008900 Sobic001G281400--Sobic009G008900 Sobic001G499300 Sobic001G499300 Sobic001G281400--Sobic001G499300 Sobic009G139400--Sobic009G077800 Sobic009G139400--Sobic003G297600 Sobic001G119400 Sobic001G119400 Sobic009G139400--Sobic001G119400 Sobic009G139400--Sobic001G177800 Sobic007G184600 Sobic007G184600 Sobic009G139400--Sobic007G184600 Sobic010G066700 Sobic010G066700 Sobic009G139400--Sobic010G066700 Sobic002G353900 Sobic002G353900 Sobic009G139400--Sobic002G353900 Sobic003G382600 Sobic003G382600 Sobic009G139400--Sobic003G382600 Sobic005G029200 Sobic005G029200 Sobic009G139400--Sobic005G029200 Sobic004G187900--Sobic001G281400 Sobic004G187900--Sobic001G124600 Sobic002G140400 Sobic002G140400 Sobic004G187900--Sobic002G140400 Sobic004G187900--Sobic009G141800 Sobic004G187900--Sobic004G321300 Sobic004G187900--Sobic003G350300 Sobic004G187900--Sobic009G008900 Sobic004G187900--Sobic001G477300 Sobic008G136400 Sobic008G136400 Sobic004G187900--Sobic008G136400 Sobic001G124600--Sobic004G187900 Sobic001G124600--Sobic001G477300 Sobic001G124600--Sobic002G393000 Sobic001G038900 Sobic001G038900 Sobic001G124600--Sobic001G038900 Sobic001G124600--Sobic009G008900 Sobic001G124600--Sobic002G140400 Sobic001G124600--Sobic009G141800 Sobic001G124600--Sobic001G119400 Sobic001G124600--Sobic010G086200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.