Gene annotation
Transcriptome id Sobic.010G104000.3,Sobic.010G104000.4,Sobic.010G104000.5,Sobic.010G104000.2,Sobic.010G104000.7,Sobic.010G104000.1,Sobic.010G104000.6
Synonym Sb10g009065
Functional annotation GTP-binding protein, putative, expressed
UniProt A0A1W0VSE8 , A0A1W0VSE1 , A0A1W0VSB1 , C5Z7Y9
Pfam PF01926
Panther DB PTHR11649 PTHR11649:SF3
NCBI CDD -
KEGG Orthology K03595; era, GTPase
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT5G66470 : RNA binding;GTP binding
RAP-DB (Rice) LOC_Os05g49220.1 : GTP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a036633
Brachypodium KQK04816
Barley HORVU1Hr1G089430.1 , HORVU1Hr1G089430.3 , HORVU1Hr1G089430.2 , HORVU1Hr1G089430.5 , HORVU1Hr1G089430.4 , HORVU1Hr1G089430.6
Wheat TraesCS1D02G412600 , TraesCS1B02G434400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G135575 - -
2 Sobic.001G159032 - -
3 Sobic.009G222200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
4 Sobic.003G329900 FAD dependent oxidoreductase domain containing protein, expressed -
5 Sobic.002G421300 stress responsive protein, putative, expressed -
6 Sobic.003G241900 expressed protein -
7 Sobic.001G111700 alpha/beta-Hydrolases superfamily protein(PubMedID : 26465154)@alpha/beta-Hydrolases superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
8 Sobic.003G036100 - -
9 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
10 Sobic.008G104601 - -
11 Sobic.009G054900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@relA-SpoT like protein RSH4, putative, expressed -
12 Sobic.004G035700 - -
13 Sobic.004G056800 DEFL1 - Defensin and Defensin-like DEFL family, expressed -
14 Sobic.006G080800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLH1 - cellulose synthase-like family H, expressed -
15 Sobic.007G000900 flap endonuclease, putative, expressed K15338: GEN1, flap endonuclease GEN
16 Sobic.001G182850 - -
17 Sobic.008G018700 expressed protein -
18 Sobic.006G006700 - -
19 Sobic.002G213000 - -
20 Sobic.004G166000 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase


Gene co-expression network
sample Sobic010G104000 Sobic010G104000 Sobic006G135575 Sobic006G135575 Sobic010G104000--Sobic006G135575 Sobic001G159032 Sobic001G159032 Sobic010G104000--Sobic001G159032 Sobic009G222200 Sobic009G222200 Sobic010G104000--Sobic009G222200 Sobic003G329900 Sobic003G329900 Sobic010G104000--Sobic003G329900 Sobic002G421300 Sobic002G421300 Sobic010G104000--Sobic002G421300 Sobic003G241900 Sobic003G241900 Sobic010G104000--Sobic003G241900 Sobic001G111700 Sobic001G111700 Sobic010G104000--Sobic001G111700 Sobic003G036100 Sobic003G036100 Sobic010G104000--Sobic003G036100 Sobic010G183100 Sobic010G183100 Sobic010G104000--Sobic010G183100 Sobic006G135575--Sobic010G183100 Sobic004G035700 Sobic004G035700 Sobic006G135575--Sobic004G035700 Sobic010G183032 Sobic010G183032 Sobic006G135575--Sobic010G183032 Sobic010G108401 Sobic010G108401 Sobic006G135575--Sobic010G108401 Sobic007G189700 Sobic007G189700 Sobic006G135575--Sobic007G189700 Sobic003G199800 Sobic003G199800 Sobic006G135575--Sobic003G199800 Sobic005G209400 Sobic005G209400 Sobic006G135575--Sobic005G209400 Sobic001G068400 Sobic001G068400 Sobic006G135575--Sobic001G068400 Sobic006G135575--Sobic009G222200 Sobic001G073500 Sobic001G073500 Sobic001G159032--Sobic001G073500 Sobic010G214500 Sobic010G214500 Sobic001G159032--Sobic010G214500 Sobic006G080800 Sobic006G080800 Sobic001G159032--Sobic006G080800 Sobic001G159032--Sobic003G329900 Sobic003G207500 Sobic003G207500 Sobic001G159032--Sobic003G207500 Sobic007G201500 Sobic007G201500 Sobic001G159032--Sobic007G201500 Sobic007G163001 Sobic007G163001 Sobic001G159032--Sobic007G163001 Sobic004G130964 Sobic004G130964 Sobic001G159032--Sobic004G130964 Sobic007G062000 Sobic007G062000 Sobic001G159032--Sobic007G062000 Sobic009G222200--Sobic010G183100 Sobic003G237600 Sobic003G237600 Sobic009G222200--Sobic003G237600 Sobic001G189100 Sobic001G189100 Sobic009G222200--Sobic001G189100 Sobic010G030800 Sobic010G030800 Sobic009G222200--Sobic010G030800 Sobic001G355600 Sobic001G355600 Sobic009G222200--Sobic001G355600 Sobic009G222200--Sobic007G189700 Sobic009G222200--Sobic003G036100 Sobic009G222200--Sobic004G035700 Sobic006G250800 Sobic006G250800 Sobic003G329900--Sobic006G250800 Sobic003G365100 Sobic003G365100 Sobic003G329900--Sobic003G365100 Sobic009G217400 Sobic009G217400 Sobic003G329900--Sobic009G217400 Sobic001G188400 Sobic001G188400 Sobic003G329900--Sobic001G188400 Sobic003G403300 Sobic003G403300 Sobic003G329900--Sobic003G403300 Sobic007G087000 Sobic007G087000 Sobic003G329900--Sobic007G087000 Sobic002G307800 Sobic002G307800 Sobic003G329900--Sobic002G307800 Sobic006G222600 Sobic006G222600 Sobic003G329900--Sobic006G222600 Sobic007G182000 Sobic007G182000 Sobic003G329900--Sobic007G182000 Sobic002G421300--Sobic003G241900 Sobic010G153900 Sobic010G153900 Sobic002G421300--Sobic010G153900 Sobic004G026300 Sobic004G026300 Sobic002G421300--Sobic004G026300 Sobic008G108400 Sobic008G108400 Sobic002G421300--Sobic008G108400 Sobic003G303700 Sobic003G303700 Sobic002G421300--Sobic003G303700 Sobic002G421300--Sobic003G199800 Sobic009G043000 Sobic009G043000 Sobic002G421300--Sobic009G043000 Sobic003G131000 Sobic003G131000 Sobic002G421300--Sobic003G131000 Sobic002G098800 Sobic002G098800 Sobic002G421300--Sobic002G098800 Sobic009G244300 Sobic009G244300 Sobic003G241900--Sobic009G244300 Sobic003G241900--Sobic010G153900 Sobic003G241900--Sobic002G421300 Sobic004G267000 Sobic004G267000 Sobic003G241900--Sobic004G267000 Sobic003G231800 Sobic003G231800 Sobic003G241900--Sobic003G231800 Sobic007G034300 Sobic007G034300 Sobic003G241900--Sobic007G034300 Sobic004G305800 Sobic004G305800 Sobic003G241900--Sobic004G305800 Sobic001G076900 Sobic001G076900 Sobic003G241900--Sobic001G076900 Sobic010G201700 Sobic010G201700 Sobic003G241900--Sobic010G201700 Sobic001G111700--Sobic004G026300 Sobic001G111700--Sobic010G183100 Sobic001G111700--Sobic007G189700 Sobic004G351700 Sobic004G351700 Sobic001G111700--Sobic004G351700 Sobic001G111700--Sobic003G199800 Sobic001G111700--Sobic009G222200 Sobic001G111700--Sobic003G036100 Sobic004G353700 Sobic004G353700 Sobic001G111700--Sobic004G353700 Sobic001G111700--Sobic008G108400 Sobic003G036100--Sobic001G189100 Sobic003G036100--Sobic003G237600 Sobic003G036100--Sobic004G353700 Sobic003G036100--Sobic007G189700 Sobic003G036100--Sobic010G030800 Sobic003G036100--Sobic009G222200 Sobic009G254600 Sobic009G254600 Sobic003G036100--Sobic009G254600 Sobic003G036100--Sobic001G111700 Sobic010G183100--Sobic004G035700 Sobic010G183100--Sobic007G189700 Sobic008G081200 Sobic008G081200 Sobic010G183100--Sobic008G081200 Sobic010G183100--Sobic001G068400 Sobic010G183100--Sobic003G199800 Sobic010G038500 Sobic010G038500 Sobic010G183100--Sobic010G038500 Sobic002G040100 Sobic002G040100 Sobic010G183100--Sobic002G040100 Sobic010G183100--Sobic009G254600 Sobic010G183100--Sobic009G222200
Octagon: transcription factors


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