Gene annotation
Transcriptome id Sobic.003G329900.2,Sobic.003G329900.1
Synonym Sb03g037590
Functional annotation FAD dependent oxidoreductase domain containing protein, expressed
UniProt A0A1W0W008 , C5XN37
Pfam PF01266 PF13450
Panther DB PTHR13847 PTHR13847:SF206
NCBI CDD KOG2665; Predicted FAD-dependent oxidoreductase
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G56840 : FAD-dependent oxidoreductase family protein
RAP-DB (Rice) LOC_Os01g59490.1 : FAD dependent oxidoreductase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a027148 , Zm00025a051487
Brachypodium KQK10244 , KQK10243 , PNT73060 , PNT73061
Barley HORVU3Hr1G079270.4 , HORVU3Hr1G079270.5 , HORVU3Hr1G079270.1 , HORVU7Hr1G078400.2 , HORVU7Hr1G078400.3 , HORVU7Hr1G078400.1
Wheat TraesCS3A02G334600 , TraesCS3B02G365500 , TraesCS3D02G327900
Populus -


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cDNA sequences
Sobic.003G329900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G250800 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
2 Sobic.003G365100 hydrolase, alpha/beta fold family, putative, expressed -
3 Sobic.009G217400 regulator of chromosome condensation, putative, expressed -
4 Sobic.001G188400 tobamovirus multiplication protein, putative, expressed -
5 Sobic.003G403300 Sucrose phosphate synthase genes(PubMedID : 24456189)@"sucrose-phosphate synthase, predicted target of miR6223 or sbi-miR6223-3p expressed in the stems of sweet sorghum"(PubMedID : 26117170)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
6 Sobic.007G087000 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
7 Sobic.002G307800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K01931: protein neuralized
8 Sobic.006G222600 AT hook motif family protein, expressed -
9 Sobic.007G182000 hydroxymethylglutaryl-CoA synthase("PubMedID : 26759170,PubMedID : 24597475")@hydroxymethylglutaryl-CoA synthase, putative, expressed K01641: hydroxymethylglutaryl-CoA synthase
10 Sobic.003G243800 - -
11 Sobic.010G186100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.003G213400 expressed protein -
13 Sobic.003G354600 csAtPR5, putative, expressed -
14 Sobic.002G079000 expressed protein -
15 Sobic.010G071100 expressed protein -
16 Sobic.002G376600 paramyosin, putative, expressed -
17 Sobic.004G198600 cyclin G-associated kinase, putative, expressed K08853: AP2-associated kinase
18 Sobic.003G107500 expressed protein K10841: ERCC6, CSB, DNA excision repair protein ERCC-6
19 Sobic.002G407000 4-alpha-glucanotransferase, putative, expressed K00705: 4-alpha-glucanotransferase
20 Sobic.005G111700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -


Gene co-expression network
sample Sobic003G329900 Sobic003G329900 Sobic006G250800 Sobic006G250800 Sobic003G329900--Sobic006G250800 Sobic003G365100 Sobic003G365100 Sobic003G329900--Sobic003G365100 Sobic009G217400 Sobic009G217400 Sobic003G329900--Sobic009G217400 Sobic001G188400 Sobic001G188400 Sobic003G329900--Sobic001G188400 Sobic003G403300 Sobic003G403300 Sobic003G329900--Sobic003G403300 Sobic007G087000 Sobic007G087000 Sobic003G329900--Sobic007G087000 Sobic002G307800 Sobic002G307800 Sobic003G329900--Sobic002G307800 Sobic006G222600 Sobic006G222600 Sobic003G329900--Sobic006G222600 Sobic007G182000 Sobic007G182000 Sobic003G329900--Sobic007G182000 Sobic002G079000 Sobic002G079000 Sobic006G250800--Sobic002G079000 Sobic006G250800--Sobic001G188400 Sobic006G250800--Sobic009G217400 Sobic003G316200 Sobic003G316200 Sobic006G250800--Sobic003G316200 Sobic002G084800 Sobic002G084800 Sobic006G250800--Sobic002G084800 Sobic009G116900 Sobic009G116900 Sobic006G250800--Sobic009G116900 Sobic006G250800--Sobic007G087000 Sobic001G253300 Sobic001G253300 Sobic006G250800--Sobic001G253300 Sobic002G306100 Sobic002G306100 Sobic006G250800--Sobic002G306100 Sobic003G365100--Sobic003G316200 Sobic003G365100--Sobic002G306100 Sobic003G365100--Sobic001G253300 Sobic005G177700 Sobic005G177700 Sobic003G365100--Sobic005G177700 Sobic003G156400 Sobic003G156400 Sobic003G365100--Sobic003G156400 Sobic003G365100--Sobic007G182000 Sobic003G365100--Sobic006G250800 Sobic003G365100--Sobic001G188400 Sobic005G090300 Sobic005G090300 Sobic003G365100--Sobic005G090300 Sobic009G217400--Sobic007G182000 Sobic009G217400--Sobic006G250800 Sobic009G217400--Sobic002G307800 Sobic003G433400 Sobic003G433400 Sobic009G217400--Sobic003G433400 Sobic009G217400--Sobic009G116900 Sobic003G092800 Sobic003G092800 Sobic009G217400--Sobic003G092800 Sobic009G217400--Sobic001G253300 Sobic001G257800 Sobic001G257800 Sobic009G217400--Sobic001G257800 Sobic002G180800 Sobic002G180800 Sobic009G217400--Sobic002G180800 Sobic006G115100 Sobic006G115100 Sobic001G188400--Sobic006G115100 Sobic001G188400--Sobic001G253300 Sobic001G188400--Sobic003G316200 Sobic001G188400--Sobic006G250800 Sobic007G004300 Sobic007G004300 Sobic001G188400--Sobic007G004300 Sobic001G188400--Sobic002G079000 Sobic002G355800 Sobic002G355800 Sobic001G188400--Sobic002G355800 Sobic001G188400--Sobic002G084800 Sobic008G055500 Sobic008G055500 Sobic001G188400--Sobic008G055500 Sobic002G310900 Sobic002G310900 Sobic003G403300--Sobic002G310900 Sobic003G010800 Sobic003G010800 Sobic003G403300--Sobic003G010800 Sobic003G403300--Sobic002G307800 Sobic002G098900 Sobic002G098900 Sobic003G403300--Sobic002G098900 Sobic002G407000 Sobic002G407000 Sobic003G403300--Sobic002G407000 Sobic010G134000 Sobic010G134000 Sobic003G403300--Sobic010G134000 Sobic001G067700 Sobic001G067700 Sobic003G403300--Sobic001G067700 Sobic002G069000 Sobic002G069000 Sobic003G403300--Sobic002G069000 Sobic003G198900 Sobic003G198900 Sobic003G403300--Sobic003G198900 Sobic007G087000--Sobic002G079000 Sobic007G076400 Sobic007G076400 Sobic007G087000--Sobic007G076400 Sobic007G087000--Sobic002G306100 Sobic008G116700 Sobic008G116700 Sobic007G087000--Sobic008G116700 Sobic007G087000--Sobic006G250800 Sobic001G014200 Sobic001G014200 Sobic007G087000--Sobic001G014200 Sobic001G237600 Sobic001G237600 Sobic007G087000--Sobic001G237600 Sobic007G172700 Sobic007G172700 Sobic007G087000--Sobic007G172700 Sobic009G107300 Sobic009G107300 Sobic007G087000--Sobic009G107300 Sobic002G307800--Sobic009G217400 Sobic002G307800--Sobic006G250800 Sobic002G307800--Sobic002G310900 Sobic002G307800--Sobic003G403300 Sobic002G307800--Sobic003G010800 Sobic002G307800--Sobic003G198900 Sobic004G302800 Sobic004G302800 Sobic002G307800--Sobic004G302800 Sobic010G007300 Sobic010G007300 Sobic002G307800--Sobic010G007300 Sobic002G307800--Sobic003G433400 Sobic007G201500 Sobic007G201500 Sobic006G222600--Sobic007G201500 Sobic002G376600 Sobic002G376600 Sobic006G222600--Sobic002G376600 Sobic004G169000 Sobic004G169000 Sobic006G222600--Sobic004G169000 Sobic003G191700 Sobic003G191700 Sobic006G222600--Sobic003G191700 Sobic005G149200 Sobic005G149200 Sobic006G222600--Sobic005G149200 Sobic010G218000 Sobic010G218000 Sobic006G222600--Sobic010G218000 Sobic010G210500 Sobic010G210500 Sobic006G222600--Sobic010G210500 Sobic002G341000 Sobic002G341000 Sobic006G222600--Sobic002G341000 Sobic004G069000 Sobic004G069000 Sobic006G222600--Sobic004G069000 Sobic007G182000--Sobic009G217400 Sobic007G182000--Sobic003G365100 Sobic007G182000--Sobic001G253300 Sobic007G182000--Sobic006G250800 Sobic007G182000--Sobic007G087000 Sobic002G057400 Sobic002G057400 Sobic007G182000--Sobic002G057400 Sobic007G182000--Sobic003G433400 Sobic003G243800 Sobic003G243800 Sobic007G182000--Sobic003G243800 Sobic007G182000--Sobic001G257800
Octagon: transcription factors


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