Gene annotation
Transcriptome id Sobic.003G243800.1
Synonym
Functional annotation -
UniProt A0A1B6Q569
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G243800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G376200 auxin response factor, putative, expressed -
2 Sobic.003G086300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cation efflux family protein, putative, expressed -
3 Sobic.009G217400 regulator of chromosome condensation, putative, expressed -
4 Sobic.001G332700 pentatricopeptide repeat protein PPR986-12, putative, expressed -
5 Sobic.010G218000 rabGAP/TBC domain-containing protein, putative, expressed K18469: TBC1 domain family member 5
6 Sobic.001G141400 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
7 Sobic.003G039900 OsFBDUF1 - F-box and DUF domain containing protein, expressed -
8 Sobic.001G253300 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
9 Sobic.007G182000 hydroxymethylglutaryl-CoA synthase("PubMedID : 26759170,PubMedID : 24597475")@hydroxymethylglutaryl-CoA synthase, putative, expressed K01641: hydroxymethylglutaryl-CoA synthase
10 Sobic.003G365100 hydrolase, alpha/beta fold family, putative, expressed -
11 Sobic.003G444800 expressed protein -
12 Sobic.004G213300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
13 Sobic.001G475300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
14 Sobic.005G090300 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
15 Sobic.006G250800 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
16 Sobic.005G138300 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
17 Sobic.010G213500 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
18 Sobic.002G057400 expressed protein K16586: HAUS augmin-like complex subunit 3
19 Sobic.K028600 expressed protein -
20 Sobic.007G172700 ECT5, putative, expressed -


Gene co-expression network
sample Sobic003G243800 Sobic003G243800 Sobic001G376200 Sobic001G376200 Sobic003G243800--Sobic001G376200 Sobic003G086300 Sobic003G086300 Sobic003G243800--Sobic003G086300 Sobic009G217400 Sobic009G217400 Sobic003G243800--Sobic009G217400 Sobic001G332700 Sobic001G332700 Sobic003G243800--Sobic001G332700 Sobic010G218000 Sobic010G218000 Sobic003G243800--Sobic010G218000 Sobic001G141400 Sobic001G141400 Sobic003G243800--Sobic001G141400 Sobic003G039900 Sobic003G039900 Sobic003G243800--Sobic003G039900 Sobic001G253300 Sobic001G253300 Sobic003G243800--Sobic001G253300 Sobic007G182000 Sobic007G182000 Sobic003G243800--Sobic007G182000 Sobic003G444800 Sobic003G444800 Sobic001G376200--Sobic003G444800 Sobic002G016200 Sobic002G016200 Sobic001G376200--Sobic002G016200 SobicK028600 SobicK028600 Sobic001G376200--SobicK028600 Sobic007G147400 Sobic007G147400 Sobic001G376200--Sobic007G147400 Sobic009G192300 Sobic009G192300 Sobic001G376200--Sobic009G192300 Sobic001G308400 Sobic001G308400 Sobic001G376200--Sobic001G308400 Sobic010G169900 Sobic010G169900 Sobic001G376200--Sobic010G169900 Sobic010G226000 Sobic010G226000 Sobic001G376200--Sobic010G226000 Sobic002G103600 Sobic002G103600 Sobic001G376200--Sobic002G103600 Sobic003G086300--Sobic003G243800 Sobic003G086300--Sobic009G217400 Sobic003G086300--Sobic001G253300 Sobic004G213300 Sobic004G213300 Sobic003G086300--Sobic004G213300 Sobic003G250400 Sobic003G250400 Sobic003G086300--Sobic003G250400 Sobic003G086300--Sobic007G182000 Sobic002G307800 Sobic002G307800 Sobic003G086300--Sobic002G307800 Sobic001G475300 Sobic001G475300 Sobic003G086300--Sobic001G475300 Sobic006G250800 Sobic006G250800 Sobic003G086300--Sobic006G250800 Sobic009G217400--Sobic007G182000 Sobic009G217400--Sobic006G250800 Sobic009G217400--Sobic002G307800 Sobic003G433400 Sobic003G433400 Sobic009G217400--Sobic003G433400 Sobic009G116900 Sobic009G116900 Sobic009G217400--Sobic009G116900 Sobic003G092800 Sobic003G092800 Sobic009G217400--Sobic003G092800 Sobic009G217400--Sobic001G253300 Sobic001G257800 Sobic001G257800 Sobic009G217400--Sobic001G257800 Sobic002G180800 Sobic002G180800 Sobic009G217400--Sobic002G180800 Sobic005G138300 Sobic005G138300 Sobic001G332700--Sobic005G138300 Sobic006G234700 Sobic006G234700 Sobic001G332700--Sobic006G234700 Sobic001G332700--Sobic002G103600 Sobic001G332700--Sobic003G444800 Sobic001G332700--Sobic003G243800 Sobic010G059500 Sobic010G059500 Sobic001G332700--Sobic010G059500 Sobic001G332700--Sobic001G376200 Sobic002G260400 Sobic002G260400 Sobic001G332700--Sobic002G260400 Sobic007G017800 Sobic007G017800 Sobic001G332700--Sobic007G017800 Sobic010G218000--Sobic003G243800 Sobic006G222600 Sobic006G222600 Sobic010G218000--Sobic006G222600 Sobic004G321100 Sobic004G321100 Sobic010G218000--Sobic004G321100 Sobic009G041700 Sobic009G041700 Sobic010G218000--Sobic009G041700 Sobic007G201500 Sobic007G201500 Sobic010G218000--Sobic007G201500 Sobic005G177700 Sobic005G177700 Sobic010G218000--Sobic005G177700 Sobic007G062000 Sobic007G062000 Sobic010G218000--Sobic007G062000 Sobic010G218000--Sobic001G332700 Sobic007G172200 Sobic007G172200 Sobic010G218000--Sobic007G172200 Sobic001G141400--Sobic001G475300 Sobic009G252300 Sobic009G252300 Sobic001G141400--Sobic009G252300 Sobic001G141400--Sobic003G250400 Sobic009G194000 Sobic009G194000 Sobic001G141400--Sobic009G194000 Sobic003G190200 Sobic003G190200 Sobic001G141400--Sobic003G190200 Sobic007G172700 Sobic007G172700 Sobic001G141400--Sobic007G172700 Sobic001G490900 Sobic001G490900 Sobic001G141400--Sobic001G490900 Sobic002G200000 Sobic002G200000 Sobic001G141400--Sobic002G200000 Sobic001G141400--Sobic003G039900 Sobic003G039900--Sobic001G141400 Sobic003G039900--Sobic007G147400 Sobic003G039900--Sobic006G234700 Sobic003G039900--Sobic003G444800 Sobic004G111700 Sobic004G111700 Sobic003G039900--Sobic004G111700 Sobic003G039900--Sobic002G103600 Sobic009G228000 Sobic009G228000 Sobic003G039900--Sobic009G228000 Sobic001G376100 Sobic001G376100 Sobic003G039900--Sobic001G376100 Sobic003G039900--Sobic001G376200 Sobic003G316200 Sobic003G316200 Sobic001G253300--Sobic003G316200 Sobic001G188400 Sobic001G188400 Sobic001G253300--Sobic001G188400 Sobic001G253300--Sobic007G172700 Sobic008G097900 Sobic008G097900 Sobic001G253300--Sobic008G097900 Sobic003G365100 Sobic003G365100 Sobic001G253300--Sobic003G365100 Sobic001G253300--Sobic005G177700 Sobic002G355800 Sobic002G355800 Sobic001G253300--Sobic002G355800 Sobic001G253300--Sobic006G250800 Sobic009G162100 Sobic009G162100 Sobic001G253300--Sobic009G162100 Sobic007G182000--Sobic009G217400 Sobic007G182000--Sobic003G365100 Sobic007G182000--Sobic001G253300 Sobic007G182000--Sobic006G250800 Sobic007G087000 Sobic007G087000 Sobic007G182000--Sobic007G087000 Sobic002G057400 Sobic002G057400 Sobic007G182000--Sobic002G057400 Sobic007G182000--Sobic003G433400 Sobic007G182000--Sobic003G243800 Sobic007G182000--Sobic001G257800
Octagon: transcription factors


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