Gene annotation
Transcriptome id Sobic.006G222600.7,Sobic.006G222600.6,Sobic.006G222600.5,Sobic.006G222600.3
Synonym Sb06g029200
Functional annotation AT hook motif family protein, expressed
UniProt A0A1B6PNB2 , A0A1B6PNB1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g53460.3,LOC_Os04g53460.2,LOC_Os04g53460.1 : AT hook motif family protein, expressed
MaizeGDB (Corn) Zm00025a009702 , Zm00025a057077
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G222600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G201500 rabGAP/TBC domain-containing protein, putative, expressed K18469: TBC1 domain family member 5
2 Sobic.002G376600 paramyosin, putative, expressed -
3 Sobic.004G169000 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
4 Sobic.003G191700 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3
5 Sobic.005G149200 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
6 Sobic.010G218000 rabGAP/TBC domain-containing protein, putative, expressed K18469: TBC1 domain family member 5
7 Sobic.010G210500 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
8 Sobic.002G341000 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
9 Sobic.004G069000 expressed protein -
10 Sobic.003G043200 EMB2410, putative, expressed -
11 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.010G020800 aminotransferase, classes I and II, domain containing protein, expressed K14270: aminotransferase
13 Sobic.010G176200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G190400 rossmann fold nucleotide-binding protein involved in DNA uptake, putative, expressed -
15 Sobic.001G100100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@GATA transcription factor 25, putative, expressed -
16 Sobic.004G151300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF803 domain containing, putative, expressed -
17 Sobic.003G354600 csAtPR5, putative, expressed -
18 Sobic.003G313300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plus-3 domain containing protein, expressed -
19 Sobic.001G481900 SAC domain containing protein, putative, expressed -
20 Sobic.001G136800 dual specificity protein phosphatase, putative, expressed -


Gene co-expression network
sample Sobic006G222600 Sobic006G222600 Sobic007G201500 Sobic007G201500 Sobic006G222600--Sobic007G201500 Sobic002G376600 Sobic002G376600 Sobic006G222600--Sobic002G376600 Sobic004G169000 Sobic004G169000 Sobic006G222600--Sobic004G169000 Sobic003G191700 Sobic003G191700 Sobic006G222600--Sobic003G191700 Sobic005G149200 Sobic005G149200 Sobic006G222600--Sobic005G149200 Sobic010G218000 Sobic010G218000 Sobic006G222600--Sobic010G218000 Sobic010G210500 Sobic010G210500 Sobic006G222600--Sobic010G210500 Sobic002G341000 Sobic002G341000 Sobic006G222600--Sobic002G341000 Sobic004G069000 Sobic004G069000 Sobic006G222600--Sobic004G069000 Sobic001G073500 Sobic001G073500 Sobic007G201500--Sobic001G073500 Sobic007G201500--Sobic006G222600 Sobic007G201500--Sobic010G210500 Sobic001G375100 Sobic001G375100 Sobic007G201500--Sobic001G375100 Sobic010G205100 Sobic010G205100 Sobic007G201500--Sobic010G205100 Sobic002G305000 Sobic002G305000 Sobic007G201500--Sobic002G305000 Sobic010G176200 Sobic010G176200 Sobic007G201500--Sobic010G176200 Sobic003G354600 Sobic003G354600 Sobic007G201500--Sobic003G354600 Sobic008G130000 Sobic008G130000 Sobic007G201500--Sobic008G130000 Sobic001G532600 Sobic001G532600 Sobic002G376600--Sobic001G532600 Sobic004G120100 Sobic004G120100 Sobic002G376600--Sobic004G120100 Sobic002G376600--Sobic006G222600 Sobic002G181600 Sobic002G181600 Sobic002G376600--Sobic002G181600 Sobic001G198400 Sobic001G198400 Sobic002G376600--Sobic001G198400 Sobic002G098900 Sobic002G098900 Sobic002G376600--Sobic002G098900 Sobic004G163800 Sobic004G163800 Sobic002G376600--Sobic004G163800 Sobic001G136800 Sobic001G136800 Sobic002G376600--Sobic001G136800 Sobic002G335000 Sobic002G335000 Sobic002G376600--Sobic002G335000 Sobic001G352400 Sobic001G352400 Sobic004G169000--Sobic001G352400 Sobic004G169000--Sobic002G341000 Sobic001G333800 Sobic001G333800 Sobic004G169000--Sobic001G333800 Sobic004G281800 Sobic004G281800 Sobic004G169000--Sobic004G281800 Sobic006G050700 Sobic006G050700 Sobic004G169000--Sobic006G050700 Sobic006G175800 Sobic006G175800 Sobic004G169000--Sobic006G175800 Sobic003G229300 Sobic003G229300 Sobic004G169000--Sobic003G229300 Sobic004G042200 Sobic004G042200 Sobic004G169000--Sobic004G042200 Sobic005G106600 Sobic005G106600 Sobic004G169000--Sobic005G106600 Sobic003G191700--Sobic004G042200 Sobic003G313300 Sobic003G313300 Sobic003G191700--Sobic003G313300 Sobic006G133900 Sobic006G133900 Sobic003G191700--Sobic006G133900 Sobic003G191700--Sobic003G229300 Sobic003G017100 Sobic003G017100 Sobic003G191700--Sobic003G017100 Sobic009G038900 Sobic009G038900 Sobic003G191700--Sobic009G038900 Sobic007G198300 Sobic007G198300 Sobic003G191700--Sobic007G198300 Sobic003G155100 Sobic003G155100 Sobic003G191700--Sobic003G155100 Sobic010G002700 Sobic010G002700 Sobic003G191700--Sobic010G002700 Sobic005G149200--Sobic001G375100 Sobic006G219600 Sobic006G219600 Sobic005G149200--Sobic006G219600 Sobic001G454500 Sobic001G454500 Sobic005G149200--Sobic001G454500 Sobic005G149200--Sobic006G133900 Sobic003G301900 Sobic003G301900 Sobic005G149200--Sobic003G301900 Sobic001G517800 Sobic001G517800 Sobic005G149200--Sobic001G517800 Sobic005G149200--Sobic001G333800 Sobic007G090403 Sobic007G090403 Sobic005G149200--Sobic007G090403 Sobic005G149200--Sobic003G155100 Sobic003G243800 Sobic003G243800 Sobic010G218000--Sobic003G243800 Sobic010G218000--Sobic006G222600 Sobic004G321100 Sobic004G321100 Sobic010G218000--Sobic004G321100 Sobic009G041700 Sobic009G041700 Sobic010G218000--Sobic009G041700 Sobic010G218000--Sobic007G201500 Sobic005G177700 Sobic005G177700 Sobic010G218000--Sobic005G177700 Sobic007G062000 Sobic007G062000 Sobic010G218000--Sobic007G062000 Sobic001G332700 Sobic001G332700 Sobic010G218000--Sobic001G332700 Sobic007G172200 Sobic007G172200 Sobic010G218000--Sobic007G172200 Sobic002G325300 Sobic002G325300 Sobic010G210500--Sobic002G325300 Sobic010G147100 Sobic010G147100 Sobic010G210500--Sobic010G147100 Sobic003G264100 Sobic003G264100 Sobic010G210500--Sobic003G264100 Sobic009G255700 Sobic009G255700 Sobic010G210500--Sobic009G255700 Sobic010G210500--Sobic003G354600 Sobic003G119600 Sobic003G119600 Sobic010G210500--Sobic003G119600 Sobic010G210500--Sobic007G201500 Sobic010G210500--Sobic007G172200 Sobic001G207000 Sobic001G207000 Sobic010G210500--Sobic001G207000 Sobic004G151300 Sobic004G151300 Sobic002G341000--Sobic004G151300 Sobic002G341000--Sobic004G169000 Sobic003G271400 Sobic003G271400 Sobic002G341000--Sobic003G271400 Sobic006G257800 Sobic006G257800 Sobic002G341000--Sobic006G257800 Sobic002G341000--Sobic003G191700 Sobic008G167600 Sobic008G167600 Sobic002G341000--Sobic008G167600 Sobic001G207800 Sobic001G207800 Sobic002G341000--Sobic001G207800 Sobic004G312600 Sobic004G312600 Sobic002G341000--Sobic004G312600 Sobic003G264800 Sobic003G264800 Sobic002G341000--Sobic003G264800 Sobic004G069000--Sobic003G271400 Sobic001G528800 Sobic001G528800 Sobic004G069000--Sobic001G528800 Sobic001G345100 Sobic001G345100 Sobic004G069000--Sobic001G345100 Sobic008G033000 Sobic008G033000 Sobic004G069000--Sobic008G033000 Sobic005G206500 Sobic005G206500 Sobic004G069000--Sobic005G206500 Sobic010G085100 Sobic010G085100 Sobic004G069000--Sobic010G085100 Sobic007G136200 Sobic007G136200 Sobic004G069000--Sobic007G136200 Sobic001G536700 Sobic001G536700 Sobic004G069000--Sobic001G536700 Sobic001G378100 Sobic001G378100 Sobic004G069000--Sobic001G378100
Octagon: transcription factors


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