Gene annotation
Transcriptome id Sobic.010G180550.1
Synonym -
Functional annotation -
UniProt A0A1W0VTP0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G369566 - -
2 Sobic.009G092300 expressed protein -
3 Sobic.002G311900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
4 Sobic.005G096450 - -
5 Sobic.007G149200 "DEP1/GGC2(Ortholog in rice:Huang et al., 2009(PubMedID : 31659905)@keratin-associated protein 5-4, putative, expressed -
6 Sobic.001G519700 regulatory protein, putative, expressed -
7 Sobic.003G169000 - K02718: photosystem II PsbT protein
8 Sobic.001G011600 glutathione S-transferase, putative, expressed -
9 Sobic.006G258600 thiol-disulphide oxidoreductase DCC, putative, expressed -
10 Sobic.003G169100 photosystem II P680 chlorophyll A apoprotein, putative, expressed K02704: photosystem II CP47 chlorophyll apoprotein
11 Sobic.007G137501 - -
12 Sobic.001G487900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
13 Sobic.003G168200 - -
14 Sobic.005G116400 apocytochrome f precursor, putative, expressed K02634: apocytochrome f
15 Sobic.001G098700 GRAM domain containing protein, expressed -
16 Sobic.010G139200 photosystem II P680 chlorophyll A apoprotein, putative, expressed -
17 Sobic.007G145801 - K02712: photosystem II PsbK protein
18 Sobic.003G369533 - -
19 Sobic.003G352000 growth regulator related protein, putative, expressed -
20 Sobic.002G278100 armadillo/beta-catenin repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic010G180550 Sobic010G180550 Sobic003G369566 Sobic003G369566 Sobic010G180550--Sobic003G369566 Sobic009G092300 Sobic009G092300 Sobic010G180550--Sobic009G092300 Sobic002G311900 Sobic002G311900 Sobic010G180550--Sobic002G311900 Sobic005G096450 Sobic005G096450 Sobic010G180550--Sobic005G096450 Sobic007G149200 Sobic007G149200 Sobic010G180550--Sobic007G149200 Sobic001G519700 Sobic001G519700 Sobic010G180550--Sobic001G519700 Sobic003G169000 Sobic003G169000 Sobic010G180550--Sobic003G169000 Sobic001G011600 Sobic001G011600 Sobic010G180550--Sobic001G011600 Sobic006G258600 Sobic006G258600 Sobic010G180550--Sobic006G258600 Sobic003G369533 Sobic003G369533 Sobic003G369566--Sobic003G369533 Sobic003G369566--Sobic007G149200 Sobic003G168200 Sobic003G168200 Sobic003G369566--Sobic003G168200 Sobic003G369566--Sobic002G311900 Sobic005G116400 Sobic005G116400 Sobic003G369566--Sobic005G116400 Sobic003G169100 Sobic003G169100 Sobic003G369566--Sobic003G169100 Sobic003G352000 Sobic003G352000 Sobic003G369566--Sobic003G352000 SobicK029400 SobicK029400 Sobic003G369566--SobicK029400 Sobic003G369566--Sobic003G169000 Sobic009G092300--Sobic010G180550 Sobic007G126150 Sobic007G126150 Sobic009G092300--Sobic007G126150 Sobic001G487900 Sobic001G487900 Sobic009G092300--Sobic001G487900 Sobic009G143750 Sobic009G143750 Sobic009G092300--Sobic009G143750 Sobic007G207100 Sobic007G207100 Sobic009G092300--Sobic007G207100 Sobic004G210400 Sobic004G210400 Sobic009G092300--Sobic004G210400 Sobic009G092300--Sobic003G369566 Sobic002G150200 Sobic002G150200 Sobic009G092300--Sobic002G150200 Sobic001G075500 Sobic001G075500 Sobic009G092300--Sobic001G075500 Sobic002G311900--Sobic003G369566 Sobic002G311900--Sobic003G369533 Sobic002G311900--Sobic003G169100 Sobic007G065000 Sobic007G065000 Sobic002G311900--Sobic007G065000 Sobic001G358366 Sobic001G358366 Sobic002G311900--Sobic001G358366 Sobic010G185250 Sobic010G185250 Sobic002G311900--Sobic010G185250 Sobic002G311900--Sobic003G169000 Sobic002G311900--Sobic003G168200 Sobic002G311900--Sobic007G149200 Sobic005G096450--Sobic005G116400 Sobic005G096450--Sobic007G149200 Sobic007G137501 Sobic007G137501 Sobic005G096450--Sobic007G137501 Sobic010G201266 Sobic010G201266 Sobic005G096450--Sobic010G201266 Sobic002G278100 Sobic002G278100 Sobic005G096450--Sobic002G278100 Sobic007G141650 Sobic007G141650 Sobic005G096450--Sobic007G141650 Sobic005G096450--Sobic003G168200 Sobic010G225400 Sobic010G225400 Sobic005G096450--Sobic010G225400 Sobic005G096450--Sobic003G369533 Sobic007G149200--Sobic003G168200 Sobic007G149200--Sobic002G278100 Sobic007G149200--Sobic005G116400 Sobic007G149200--Sobic003G352000 Sobic007G149200--Sobic010G201266 Sobic007G149200--SobicK029400 Sobic007G149200--Sobic003G369533 Sobic007G149200--Sobic003G169000 Sobic010G139200 Sobic010G139200 Sobic007G149200--Sobic010G139200 Sobic004G272500 Sobic004G272500 Sobic001G519700--Sobic004G272500 Sobic001G519700--Sobic010G225400 Sobic001G519700--Sobic007G141650 Sobic001G519700--Sobic005G096450 Sobic001G519700--Sobic010G201266 Sobic001G519700--Sobic005G116400 Sobic001G519700--Sobic002G278100 Sobic001G519700--Sobic001G011600 Sobic009G104850 Sobic009G104850 Sobic001G519700--Sobic009G104850 Sobic003G169000--Sobic003G169100 Sobic003G169000--Sobic007G065000 Sobic003G169000--Sobic007G149200 Sobic003G169000--Sobic003G352000 Sobic003G169000--Sobic003G369533 Sobic003G169000--Sobic003G168200 Sobic003G169000--SobicK029400 Sobic007G145801 Sobic007G145801 Sobic003G169000--Sobic007G145801 Sobic003G218950 Sobic003G218950 Sobic003G169000--Sobic003G218950 Sobic001G011600--Sobic010G225400 Sobic006G130100 Sobic006G130100 Sobic001G011600--Sobic006G130100 Sobic001G011600--Sobic003G218950 Sobic001G011600--Sobic003G369566 Sobic001G011600--Sobic007G137501 Sobic001G011600--Sobic003G369533 Sobic001G011600--Sobic001G519700 Sobic001G011600--Sobic005G116400 Sobic003G050100 Sobic003G050100 Sobic001G011600--Sobic003G050100 Sobic002G341600 Sobic002G341600 Sobic006G258600--Sobic002G341600 Sobic006G258600--Sobic001G519700 Sobic009G029100 Sobic009G029100 Sobic006G258600--Sobic009G029100 Sobic006G258600--Sobic001G011600 Sobic004G299850 Sobic004G299850 Sobic006G258600--Sobic004G299850 Sobic006G258600--Sobic003G369566 Sobic006G258600--Sobic002G311900 Sobic006G258600--Sobic001G075500 Sobic006G258600--Sobic004G272500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.