Gene annotation
Transcriptome id Sobic.010G249500.3
Synonym MPK2, Sb10g028780, ATMPK2
Functional annotation CGMC_MAPKCMGC_2_SLT2y_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
UniProt C5Z8V4
Pfam PF06293
Panther DB PTHR24055 PTHR24055:SF216
NCBI CDD -
KEGG Orthology K04371; ERK, mitogen-activated protein kinase 1/3
Gene Ontology GO:0016773; phosphotransferase activity, alcohol group as acceptor GO:0016020membrane GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT1G10210 : mitogen-activated protein kinase 1
RAP-DB (Rice) LOC_Os06g48590.1 : CGMC_MAPKCMGC_2_SLT2y_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed
MaizeGDB (Corn) Zm00025a018990 , Zm00025a018347
Brachypodium -
Barley HORVU5Hr1G078060.2 , HORVU7Hr1G097740.2 , HORVU7Hr1G097740.3 , HORVU7Hr1G097740.1 , HORVU5Hr1G078060.3 , HORVU5Hr1G078060.1 , HORVU5Hr1G078060.4 , HORVU5Hr1G078060.5
Wheat TraesCS7A02G029700 , TraesCS7D02G414700 , TraesCS7B02G322900 , TraesCS7A02G422500 , TraesCS5A02G295800
Populus -


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cDNA sequences
Sobic.010G249500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G279600 - -
2 Sobic.002G188100 - -
3 Sobic.003G178400 - -
4 Sobic.006G019901 - -
5 Sobic.006G133650 - -
6 Sobic.004G160950 - -
7 Sobic.006G167200 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
8 Sobic.009G127600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
9 Sobic.010G040000 expressed protein -
10 Sobic.002G231800 purine permease, putative, expressed -
11 Sobic.010G132300 CDK5RAP3, putative, expressed -
12 Sobic.010G191200 - -
13 Sobic.001G261440 - -
14 Sobic.003G119266 - -
15 Sobic.005G076100 rp3 protein, putative, expressed -
16 Sobic.007G174100 carrier, putative, expressed -
17 Sobic.002G284701 - -
18 Sobic.010G045300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.009G039400 jacalin-like lectin domain containing protein, expressed -
20 Sobic.001G309000 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase


Gene co-expression network
sample Sobic010G249500 Sobic010G249500 Sobic003G279600 Sobic003G279600 Sobic010G249500--Sobic003G279600 Sobic002G188100 Sobic002G188100 Sobic010G249500--Sobic002G188100 Sobic003G178400 Sobic003G178400 Sobic010G249500--Sobic003G178400 Sobic006G019901 Sobic006G019901 Sobic010G249500--Sobic006G019901 Sobic006G133650 Sobic006G133650 Sobic010G249500--Sobic006G133650 Sobic004G160950 Sobic004G160950 Sobic010G249500--Sobic004G160950 Sobic006G167200 Sobic006G167200 Sobic010G249500--Sobic006G167200 Sobic009G127600 Sobic009G127600 Sobic010G249500--Sobic009G127600 Sobic010G040000 Sobic010G040000 Sobic010G249500--Sobic010G040000 Sobic003G279600--Sobic003G178400 Sobic003G279600--Sobic004G160950 Sobic001G309000 Sobic001G309000 Sobic003G279600--Sobic001G309000 Sobic002G284701 Sobic002G284701 Sobic003G279600--Sobic002G284701 Sobic010G132300 Sobic010G132300 Sobic003G279600--Sobic010G132300 Sobic007G157200 Sobic007G157200 Sobic003G279600--Sobic007G157200 Sobic003G279600--Sobic002G188100 Sobic004G069600 Sobic004G069600 Sobic003G279600--Sobic004G069600 Sobic001G212701 Sobic001G212701 Sobic003G279600--Sobic001G212701 Sobic002G188100--Sobic006G133650 Sobic010G045300 Sobic010G045300 Sobic002G188100--Sobic010G045300 Sobic002G188100--Sobic006G167200 Sobic009G039400 Sobic009G039400 Sobic002G188100--Sobic009G039400 Sobic002G188100--Sobic010G040000 Sobic010G029200 Sobic010G029200 Sobic002G188100--Sobic010G029200 Sobic002G188100--Sobic004G069600 Sobic010G122533 Sobic010G122533 Sobic002G188100--Sobic010G122533 Sobic003G081400 Sobic003G081400 Sobic002G188100--Sobic003G081400 Sobic003G178400--Sobic003G279600 Sobic003G178400--Sobic004G160950 Sobic003G119266 Sobic003G119266 Sobic003G178400--Sobic003G119266 Sobic003G178400--Sobic002G188100 Sobic003G178400--Sobic004G069600 Sobic002G234900 Sobic002G234900 Sobic003G178400--Sobic002G234900 Sobic003G178400--Sobic006G167200 Sobic003G178400--Sobic001G309000 Sobic003G178400--Sobic006G133650 Sobic001G481201 Sobic001G481201 Sobic006G019901--Sobic001G481201 Sobic002G165401 Sobic002G165401 Sobic006G019901--Sobic002G165401 Sobic006G019901--Sobic009G127600 Sobic003G008850 Sobic003G008850 Sobic006G019901--Sobic003G008850 Sobic002G231800 Sobic002G231800 Sobic006G019901--Sobic002G231800 Sobic005G076100 Sobic005G076100 Sobic006G019901--Sobic005G076100 Sobic006G222800 Sobic006G222800 Sobic006G019901--Sobic006G222800 Sobic006G256801 Sobic006G256801 Sobic006G019901--Sobic006G256801 Sobic001G537900 Sobic001G537900 Sobic006G019901--Sobic001G537900 Sobic006G133650--Sobic009G039400 Sobic006G133650--Sobic002G188100 Sobic006G133650--Sobic010G029200 Sobic006G133650--Sobic006G167200 Sobic006G133650--Sobic004G069600 Sobic010G208300 Sobic010G208300 Sobic006G133650--Sobic010G208300 Sobic006G133650--Sobic010G045300 Sobic006G133650--Sobic010G122533 Sobic003G142900 Sobic003G142900 Sobic006G133650--Sobic003G142900 Sobic004G160950--Sobic010G132300 Sobic007G174100 Sobic007G174100 Sobic004G160950--Sobic007G174100 Sobic004G160950--Sobic002G231800 Sobic004G160950--Sobic003G279600 Sobic008G020300 Sobic008G020300 Sobic004G160950--Sobic008G020300 Sobic004G160950--Sobic002G284701 Sobic003G149900 Sobic003G149900 Sobic004G160950--Sobic003G149900 Sobic004G160950--Sobic006G019901 Sobic004G160950--Sobic003G008850 Sobic006G167200--Sobic010G122533 Sobic006G167200--Sobic002G188100 Sobic006G167200--Sobic009G039400 Sobic006G167200--Sobic006G133650 Sobic006G167200--Sobic003G081400 Sobic001G261440 Sobic001G261440 Sobic006G167200--Sobic001G261440 Sobic006G172651 Sobic006G172651 Sobic006G167200--Sobic006G172651 Sobic006G167200--Sobic010G045300 Sobic006G167200--Sobic009G127600 Sobic001G145300 Sobic001G145300 Sobic009G127600--Sobic001G145300 Sobic002G156300 Sobic002G156300 Sobic009G127600--Sobic002G156300 Sobic004G279150 Sobic004G279150 Sobic009G127600--Sobic004G279150 Sobic009G127600--Sobic001G481201 Sobic010G114400 Sobic010G114400 Sobic009G127600--Sobic010G114400 Sobic009G127600--Sobic003G008850 Sobic009G127600--Sobic006G019901 Sobic007G001300 Sobic007G001300 Sobic009G127600--Sobic007G001300 Sobic003G109400 Sobic003G109400 Sobic009G127600--Sobic003G109400 Sobic010G040000--Sobic002G188100 Sobic010G040000--Sobic006G167200 Sobic010G040000--Sobic009G039400 Sobic006G178700 Sobic006G178700 Sobic010G040000--Sobic006G178700 Sobic010G040000--Sobic006G133650 Sobic010G040000--Sobic006G019901 Sobic010G040000--Sobic010G045300 Sobic010G040000--Sobic002G231800 Sobic010G040000--Sobic003G081400
Octagon: transcription factors


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