Gene annotation
Transcriptome id Sobic.010G250700.1
Synonym FBR1, Sb10g028900, FIB1, SKIP7, ATFBR1, ATFIB1
Functional annotation rRNA 2-O-methyltransferase fibrillarin 2, putative, expressed
UniProt A0A194YLE4
Pfam PF01269
Panther DB PTHR10335
NCBI CDD -
KEGG Orthology K14563; NOP1, rRNA 2'-O-methyltransferase fibrillarin
Gene Ontology GO:0008168; methyltransferase activity GO:0008033tRNA processing GO:0006364rRNA processing GO:0003723RNA binding


Orthologs (automatic annotation)
TAIR AT5G52470 : fibrillarin 1
RAP-DB (Rice) LOC_Os02g57590.1 : rRNA 2-O-methyltransferase fibrillarin 2, putative, expressed
MaizeGDB (Corn) Zm00025a032764
Brachypodium KQK01435 , KQK01434 , KQK17021
Barley HORVU7Hr1G108780.1 , HORVU6Hr1G091860.1 , HORVU7Hr1G108780.4 , HORVU6Hr1G091860.4 , HORVU6Hr1G091860.5 , HORVU7Hr1G108780.3 , HORVU7Hr1G108780.2
Wheat TraesCS7A02G479900 , TraesCS6A02G400300 , TraesCS7B02G382200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G163301 - -
2 Sobic.009G081800 helicase, putative, expressed K11273: DDX11, CHL1, chromosome transmission fidelity protein 1
3 Sobic.006G215950 - -
4 Sobic.010G024600 aminomethyltransferase, putative, expressed K06980: tRNA-modifying protein YgfZ
5 Sobic.001G396900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
6 Sobic.004G155400 expressed protein -
7 Sobic.009G060600 - -
8 Sobic.004G298000 transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
9 Sobic.001G401900 wound-induced protein WI12, putative, expressed -
10 Sobic.002G118300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@AWPM-19-like membrane family protein, putative, expressed -
11 Sobic.007G168100 peptidyl-prolyl cis-trans isomerase, putative, expressed -
12 Sobic.002G367200 RNA-binding protein-like, putative, expressed -
13 Sobic.009G225700 glutamate synthase, chloroplast precursor, putative, expressed K00264: glutamate synthase (NADH)
14 Sobic.005G165800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@SEY1, putative, expressed -
15 Sobic.004G291200 - -
16 Sobic.008G174500 expressed protein -
17 Sobic.002G131100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-rich protein, putative, expressed -
18 Sobic.005G092301 - -
19 Sobic.004G281700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@DUF1264 domain containing protein, putative, expressed -
20 Sobic.003G236200 oleosin, putative, expressed -


Gene co-expression network
sample Sobic010G250700 Sobic010G250700 Sobic002G163301 Sobic002G163301 Sobic010G250700--Sobic002G163301 Sobic009G081800 Sobic009G081800 Sobic010G250700--Sobic009G081800 Sobic006G215950 Sobic006G215950 Sobic010G250700--Sobic006G215950 Sobic010G024600 Sobic010G024600 Sobic010G250700--Sobic010G024600 Sobic001G396900 Sobic001G396900 Sobic010G250700--Sobic001G396900 Sobic004G155400 Sobic004G155400 Sobic010G250700--Sobic004G155400 Sobic009G060600 Sobic009G060600 Sobic010G250700--Sobic009G060600 Sobic004G298000 Sobic004G298000 Sobic010G250700--Sobic004G298000 Sobic001G401900 Sobic001G401900 Sobic010G250700--Sobic001G401900 Sobic007G168100 Sobic007G168100 Sobic002G163301--Sobic007G168100 Sobic003G399500 Sobic003G399500 Sobic002G163301--Sobic003G399500 Sobic004G281700 Sobic004G281700 Sobic002G163301--Sobic004G281700 Sobic004G347500 Sobic004G347500 Sobic002G163301--Sobic004G347500 Sobic004G301800 Sobic004G301800 Sobic002G163301--Sobic004G301800 Sobic002G118300 Sobic002G118300 Sobic002G163301--Sobic002G118300 Sobic003G236200 Sobic003G236200 Sobic002G163301--Sobic003G236200 Sobic003G295600 Sobic003G295600 Sobic002G163301--Sobic003G295600 Sobic001G418500 Sobic001G418500 Sobic002G163301--Sobic001G418500 Sobic006G126800 Sobic006G126800 Sobic009G081800--Sobic006G126800 Sobic010G252200 Sobic010G252200 Sobic009G081800--Sobic010G252200 Sobic003G041400 Sobic003G041400 Sobic009G081800--Sobic003G041400 Sobic006G127200 Sobic006G127200 Sobic009G081800--Sobic006G127200 Sobic001G530100 Sobic001G530100 Sobic009G081800--Sobic001G530100 Sobic001G239900 Sobic001G239900 Sobic009G081800--Sobic001G239900 Sobic010G269800 Sobic010G269800 Sobic009G081800--Sobic010G269800 Sobic005G210500 Sobic005G210500 Sobic009G081800--Sobic005G210500 Sobic006G119300 Sobic006G119300 Sobic009G081800--Sobic006G119300 Sobic007G075250 Sobic007G075250 Sobic006G215950--Sobic007G075250 Sobic001G088600 Sobic001G088600 Sobic006G215950--Sobic001G088600 Sobic002G302300 Sobic002G302300 Sobic006G215950--Sobic002G302300 Sobic002G080900 Sobic002G080900 Sobic006G215950--Sobic002G080900 Sobic009G209400 Sobic009G209400 Sobic006G215950--Sobic009G209400 Sobic001G534900 Sobic001G534900 Sobic006G215950--Sobic001G534900 Sobic006G093500 Sobic006G093500 Sobic006G215950--Sobic006G093500 Sobic006G215950--Sobic002G118300 Sobic002G317500 Sobic002G317500 Sobic006G215950--Sobic002G317500 Sobic002G266300 Sobic002G266300 Sobic010G024600--Sobic002G266300 Sobic006G208000 Sobic006G208000 Sobic010G024600--Sobic006G208000 Sobic001G508200 Sobic001G508200 Sobic010G024600--Sobic001G508200 Sobic005G021000 Sobic005G021000 Sobic010G024600--Sobic005G021000 Sobic010G024600--Sobic004G347500 Sobic001G004600 Sobic001G004600 Sobic010G024600--Sobic001G004600 Sobic004G291200 Sobic004G291200 Sobic010G024600--Sobic004G291200 Sobic009G025500 Sobic009G025500 Sobic010G024600--Sobic009G025500 Sobic001G044300 Sobic001G044300 Sobic010G024600--Sobic001G044300 Sobic005G138500 Sobic005G138500 Sobic001G396900--Sobic005G138500 Sobic004G114600 Sobic004G114600 Sobic001G396900--Sobic004G114600 Sobic006G034300 Sobic006G034300 Sobic001G396900--Sobic006G034300 Sobic005G165800 Sobic005G165800 Sobic001G396900--Sobic005G165800 Sobic009G171400 Sobic009G171400 Sobic001G396900--Sobic009G171400 Sobic002G413200 Sobic002G413200 Sobic001G396900--Sobic002G413200 Sobic003G011000 Sobic003G011000 Sobic001G396900--Sobic003G011000 Sobic006G050600 Sobic006G050600 Sobic001G396900--Sobic006G050600 Sobic007G153600 Sobic007G153600 Sobic001G396900--Sobic007G153600 Sobic006G277100 Sobic006G277100 Sobic004G155400--Sobic006G277100 Sobic002G037600 Sobic002G037600 Sobic004G155400--Sobic002G037600 Sobic008G118300 Sobic008G118300 Sobic004G155400--Sobic008G118300 Sobic006G208200 Sobic006G208200 Sobic004G155400--Sobic006G208200 Sobic008G017700 Sobic008G017700 Sobic004G155400--Sobic008G017700 Sobic005G092301 Sobic005G092301 Sobic004G155400--Sobic005G092301 Sobic004G353500 Sobic004G353500 Sobic004G155400--Sobic004G353500 Sobic003G294900 Sobic003G294900 Sobic004G155400--Sobic003G294900 Sobic004G215200 Sobic004G215200 Sobic004G155400--Sobic004G215200 Sobic010G074940 Sobic010G074940 Sobic009G060600--Sobic010G074940 Sobic002G177600 Sobic002G177600 Sobic009G060600--Sobic002G177600 Sobic002G240000 Sobic002G240000 Sobic009G060600--Sobic002G240000 Sobic009G060600--Sobic005G021000 Sobic009G060600--Sobic004G347500 Sobic009G060600--Sobic004G301800 Sobic002G393100 Sobic002G393100 Sobic009G060600--Sobic002G393100 Sobic001G380800 Sobic001G380800 Sobic009G060600--Sobic001G380800 Sobic009G060600--Sobic006G208000 Sobic010G211200 Sobic010G211200 Sobic004G298000--Sobic010G211200 Sobic002G064800 Sobic002G064800 Sobic004G298000--Sobic002G064800 Sobic005G212201 Sobic005G212201 Sobic004G298000--Sobic005G212201 Sobic008G191700 Sobic008G191700 Sobic004G298000--Sobic008G191700 Sobic001G376501 Sobic001G376501 Sobic004G298000--Sobic001G376501 Sobic005G206100 Sobic005G206100 Sobic004G298000--Sobic005G206100 Sobic004G276000 Sobic004G276000 Sobic004G298000--Sobic004G276000 Sobic009G241900 Sobic009G241900 Sobic004G298000--Sobic009G241900 Sobic008G141900 Sobic008G141900 Sobic004G298000--Sobic008G141900 Sobic001G401900--Sobic001G396900 Sobic004G243300 Sobic004G243300 Sobic001G401900--Sobic004G243300 Sobic009G148000 Sobic009G148000 Sobic001G401900--Sobic009G148000 Sobic001G401900--Sobic005G165800 Sobic010G250100 Sobic010G250100 Sobic001G401900--Sobic010G250100 Sobic001G507000 Sobic001G507000 Sobic001G401900--Sobic001G507000 Sobic001G401900--Sobic005G138500 Sobic005G068800 Sobic005G068800 Sobic001G401900--Sobic005G068800 Sobic001G401900--Sobic006G034300
Octagon: transcription factors


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