Gene annotation
Transcriptome id Sobic.010G259001.1
Synonym -
Functional annotation -
UniProt A0A1W0VUW9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G165500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.001G263100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
3 Sobic.001G043000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
4 Sobic.009G256100 expressed protein -
5 Sobic.001G073300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
6 Sobic.001G244600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -
7 Sobic.003G139500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CDPK - CBL-interacting protein kinase 1(PubMedID : 31721651)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
8 Sobic.002G162400 potassium channel protein, putative, expressed K05389: potassium channel subfamily K, other eukaryote
9 Sobic.003G277600 DNAse I-like superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
10 Sobic.009G246300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
11 Sobic.010G225701 - -
12 Sobic.001G185800 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
13 Sobic.010G104800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
14 Sobic.008G052900 CBS domain-containing protein, putative, expressed -
15 Sobic.002G390100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
16 Sobic.006G153400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, AFG1 family domain containing protein, expressed -
17 Sobic.007G140700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K00131: glyceraldehyde-3-phosphate dehydrogenase (NADP+)
18 Sobic.003G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
19 Sobic.009G194500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G292700 crcB-like protein, expressed -


Gene co-expression network
sample Sobic010G259001 Sobic010G259001 Sobic004G165500 Sobic004G165500 Sobic010G259001--Sobic004G165500 Sobic001G263100 Sobic001G263100 Sobic010G259001--Sobic001G263100 Sobic001G043000 Sobic001G043000 Sobic010G259001--Sobic001G043000 Sobic009G256100 Sobic009G256100 Sobic010G259001--Sobic009G256100 Sobic001G073300 Sobic001G073300 Sobic010G259001--Sobic001G073300 Sobic001G244600 Sobic001G244600 Sobic010G259001--Sobic001G244600 Sobic003G139500 Sobic003G139500 Sobic010G259001--Sobic003G139500 Sobic002G162400 Sobic002G162400 Sobic010G259001--Sobic002G162400 Sobic003G277600 Sobic003G277600 Sobic010G259001--Sobic003G277600 Sobic003G042900 Sobic003G042900 Sobic004G165500--Sobic003G042900 Sobic004G165500--Sobic001G073300 Sobic002G390100 Sobic002G390100 Sobic004G165500--Sobic002G390100 Sobic004G165500--Sobic009G256100 Sobic007G105500 Sobic007G105500 Sobic004G165500--Sobic007G105500 Sobic006G093100 Sobic006G093100 Sobic004G165500--Sobic006G093100 Sobic002G404800 Sobic002G404800 Sobic004G165500--Sobic002G404800 Sobic004G215800 Sobic004G215800 Sobic004G165500--Sobic004G215800 Sobic010G104800 Sobic010G104800 Sobic004G165500--Sobic010G104800 Sobic007G058100 Sobic007G058100 Sobic001G263100--Sobic007G058100 Sobic010G231300 Sobic010G231300 Sobic001G263100--Sobic010G231300 Sobic008G129900 Sobic008G129900 Sobic001G263100--Sobic008G129900 Sobic001G263100--Sobic002G162400 Sobic001G180200 Sobic001G180200 Sobic001G263100--Sobic001G180200 Sobic001G217900 Sobic001G217900 Sobic001G263100--Sobic001G217900 Sobic003G341300 Sobic003G341300 Sobic001G263100--Sobic003G341300 Sobic002G206300 Sobic002G206300 Sobic001G263100--Sobic002G206300 Sobic006G235400 Sobic006G235400 Sobic001G263100--Sobic006G235400 Sobic006G153400 Sobic006G153400 Sobic001G043000--Sobic006G153400 Sobic001G043000--Sobic003G139500 Sobic001G043000--Sobic010G104800 Sobic001G043000--Sobic001G073300 Sobic001G043000--Sobic009G256100 Sobic010G249700 Sobic010G249700 Sobic001G043000--Sobic010G249700 Sobic004G035900 Sobic004G035900 Sobic001G043000--Sobic004G035900 Sobic003G127800 Sobic003G127800 Sobic001G043000--Sobic003G127800 Sobic010G039500 Sobic010G039500 Sobic001G043000--Sobic010G039500 Sobic009G256100--Sobic010G104800 Sobic009G256100--Sobic006G153400 Sobic009G256100--Sobic002G390100 Sobic009G256100--Sobic007G058100 Sobic009G256100--Sobic007G105500 Sobic009G256100--Sobic002G404800 Sobic003G185900 Sobic003G185900 Sobic009G256100--Sobic003G185900 Sobic009G256100--Sobic004G215800 Sobic009G256100--Sobic008G129900 Sobic001G073300--Sobic010G104800 Sobic006G161500 Sobic006G161500 Sobic001G073300--Sobic006G161500 Sobic001G073300--Sobic009G256100 Sobic001G073300--Sobic001G244600 Sobic003G409700 Sobic003G409700 Sobic001G073300--Sobic003G409700 Sobic001G073300--Sobic002G390100 Sobic001G073300--Sobic010G231300 Sobic001G073300--Sobic003G042900 Sobic001G073300--Sobic008G129900 Sobic001G244600--Sobic008G129900 Sobic001G244600--Sobic010G104800 Sobic001G244600--Sobic006G161500 Sobic001G244600--Sobic009G256100 Sobic001G244600--Sobic001G073300 Sobic001G244600--Sobic007G058100 Sobic001G244600--Sobic001G217900 Sobic008G038500 Sobic008G038500 Sobic001G244600--Sobic008G038500 Sobic001G244600--Sobic010G231300 Sobic003G139500--Sobic001G263100 Sobic004G322700 Sobic004G322700 Sobic003G139500--Sobic004G322700 Sobic003G139500--Sobic006G161500 Sobic004G322600 Sobic004G322600 Sobic003G139500--Sobic004G322600 Sobic003G139500--Sobic010G104800 Sobic003G139500--Sobic002G162400 Sobic003G139500--Sobic008G038500 Sobic001G331600 Sobic001G331600 Sobic003G139500--Sobic001G331600 Sobic003G139500--Sobic001G043000 Sobic002G162400--Sobic003G341300 Sobic002G162400--Sobic001G263100 Sobic002G162400--Sobic001G180200 Sobic002G162400--Sobic002G206300 Sobic002G162400--Sobic010G231300 Sobic002G162400--Sobic006G235400 Sobic001G077300 Sobic001G077300 Sobic002G162400--Sobic001G077300 Sobic001G258200 Sobic001G258200 Sobic002G162400--Sobic001G258200 Sobic002G162400--Sobic008G129900 Sobic003G372400 Sobic003G372400 Sobic003G277600--Sobic003G372400 Sobic009G246300 Sobic009G246300 Sobic003G277600--Sobic009G246300 Sobic003G277600--Sobic004G165500 Sobic003G277600--Sobic010G104800 Sobic009G048900 Sobic009G048900 Sobic003G277600--Sobic009G048900 Sobic004G112100 Sobic004G112100 Sobic003G277600--Sobic004G112100 Sobic003G277600--Sobic003G139500 Sobic003G277600--Sobic001G043000 Sobic003G277600--Sobic003G042900
Octagon: transcription factors


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