Gene annotation
Transcriptome id Sobic.001G079500.1
Synonym Sb01g007170, CZF2, C2H2, ZAT6
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
ZOS3-18 - C2H2 zinc finger protein, expressed
UniProt C5X031
Pfam PF13912
Panther DB PTHR26374
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G27730 : salt tolerance zinc finger
RAP-DB (Rice) LOC_Os03g55540.1 : ZOS3-18 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a016740 , Zm00025a008280
Brachypodium PNT73352 , KQK13044
Barley HORVU5Hr1G097500.2 , HORVU5Hr1G097500.3 , HORVU5Hr1G097500.1 , HORVU5Hr1G097500.4
Wheat -
Populus -


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cDNA sequences
Sobic.001G079500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G270200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
2 Sobic.001G349800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Phospholipase dalpha 1(PubMedID : 26320239)@phospholipase D, putative, expressed K01115: phospholipase D1/2
3 Sobic.003G046200 ATPase, putative, expressed -
4 Sobic.005G019400 rp3 protein, putative, expressed -
5 Sobic.003G268700 STE_MEKK_ste11_MAP3K.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
6 Sobic.003G268900 STE_MEKK_ste11_MAP3K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
7 Sobic.006G273800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
8 Sobic.007G077100 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
9 Sobic.003G154800 expressed protein -
10 Sobic.002G217100 tyrosine protein kinase domain containing protein, putative, expressed -
11 Sobic.009G217500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.18 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
12 Sobic.006G210300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
13 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -
14 Sobic.001G095700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
15 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
16 Sobic.009G044400 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
17 Sobic.010G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G393600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed -
19 Sobic.004G133301 - -
20 Sobic.001G288900 -(PubMedID : 26976818)@mitochondrial carrier protein, putative, expressed K15109: SLC25A20_29, CACT, CACL, solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29


Gene co-expression network
sample Sobic001G079500 Sobic001G079500 Sobic001G270200 Sobic001G270200 Sobic001G079500--Sobic001G270200 Sobic001G349800 Sobic001G349800 Sobic001G079500--Sobic001G349800 Sobic003G046200 Sobic003G046200 Sobic001G079500--Sobic003G046200 Sobic005G019400 Sobic005G019400 Sobic001G079500--Sobic005G019400 Sobic003G268700 Sobic003G268700 Sobic001G079500--Sobic003G268700 Sobic003G268900 Sobic003G268900 Sobic001G079500--Sobic003G268900 Sobic006G273800 Sobic006G273800 Sobic001G079500--Sobic006G273800 Sobic007G077100 Sobic007G077100 Sobic001G079500--Sobic007G077100 Sobic003G154800 Sobic003G154800 Sobic001G079500--Sobic003G154800 Sobic007G165000 Sobic007G165000 Sobic001G270200--Sobic007G165000 Sobic001G044100 Sobic001G044100 Sobic001G270200--Sobic001G044100 Sobic008G009450 Sobic008G009450 Sobic001G270200--Sobic008G009450 Sobic001G364200 Sobic001G364200 Sobic001G270200--Sobic001G364200 Sobic003G125000 Sobic003G125000 Sobic001G270200--Sobic003G125000 Sobic001G393600 Sobic001G393600 Sobic001G270200--Sobic001G393600 Sobic004G133301 Sobic004G133301 Sobic001G270200--Sobic004G133301 Sobic004G072400 Sobic004G072400 Sobic001G270200--Sobic004G072400 Sobic010G088400 Sobic010G088400 Sobic001G270200--Sobic010G088400 Sobic001G349800--Sobic003G154800 Sobic001G349800--Sobic003G046200 Sobic001G349800--Sobic001G393600 Sobic009G194100 Sobic009G194100 Sobic001G349800--Sobic009G194100 Sobic008G147800 Sobic008G147800 Sobic001G349800--Sobic008G147800 Sobic007G100900 Sobic007G100900 Sobic001G349800--Sobic007G100900 Sobic003G298500 Sobic003G298500 Sobic001G349800--Sobic003G298500 Sobic009G190900 Sobic009G190900 Sobic001G349800--Sobic009G190900 Sobic005G030200 Sobic005G030200 Sobic001G349800--Sobic005G030200 Sobic003G046200--Sobic003G154800 Sobic003G046200--Sobic007G100900 Sobic003G046200--Sobic001G349800 Sobic003G046200--Sobic001G393600 Sobic006G088500 Sobic006G088500 Sobic003G046200--Sobic006G088500 Sobic004G327100 Sobic004G327100 Sobic003G046200--Sobic004G327100 Sobic002G013500 Sobic002G013500 Sobic003G046200--Sobic002G013500 Sobic008G024000 Sobic008G024000 Sobic003G046200--Sobic008G024000 Sobic010G065500 Sobic010G065500 Sobic003G046200--Sobic010G065500 Sobic001G189700 Sobic001G189700 Sobic005G019400--Sobic001G189700 Sobic003G049300 Sobic003G049300 Sobic005G019400--Sobic003G049300 Sobic004G053200 Sobic004G053200 Sobic005G019400--Sobic004G053200 Sobic003G035700 Sobic003G035700 Sobic005G019400--Sobic003G035700 Sobic005G231700 Sobic005G231700 Sobic005G019400--Sobic005G231700 Sobic003G429300 Sobic003G429300 Sobic005G019400--Sobic003G429300 Sobic001G403600 Sobic001G403600 Sobic005G019400--Sobic001G403600 Sobic010G225100 Sobic010G225100 Sobic005G019400--Sobic010G225100 Sobic001G290400 Sobic001G290400 Sobic005G019400--Sobic001G290400 Sobic009G071800 Sobic009G071800 Sobic003G268700--Sobic009G071800 Sobic008G036000 Sobic008G036000 Sobic003G268700--Sobic008G036000 Sobic003G012800 Sobic003G012800 Sobic003G268700--Sobic003G012800 Sobic009G167000 Sobic009G167000 Sobic003G268700--Sobic009G167000 Sobic001G209800 Sobic001G209800 Sobic003G268700--Sobic001G209800 Sobic001G473900 Sobic001G473900 Sobic003G268700--Sobic001G473900 Sobic002G217100 Sobic002G217100 Sobic003G268700--Sobic002G217100 Sobic010G076600 Sobic010G076600 Sobic003G268700--Sobic010G076600 Sobic001G077700 Sobic001G077700 Sobic003G268700--Sobic001G077700 Sobic004G244100 Sobic004G244100 Sobic003G268900--Sobic004G244100 Sobic001G095700 Sobic001G095700 Sobic003G268900--Sobic001G095700 Sobic002G367900 Sobic002G367900 Sobic003G268900--Sobic002G367900 Sobic003G268900--Sobic002G217100 Sobic006G210300 Sobic006G210300 Sobic003G268900--Sobic006G210300 Sobic002G197600 Sobic002G197600 Sobic003G268900--Sobic002G197600 Sobic004G244300 Sobic004G244300 Sobic003G268900--Sobic004G244300 Sobic003G268900--Sobic009G167000 Sobic004G281200 Sobic004G281200 Sobic003G268900--Sobic004G281200 Sobic009G217500 Sobic009G217500 Sobic006G273800--Sobic009G217500 Sobic010G023200 Sobic010G023200 Sobic006G273800--Sobic010G023200 Sobic006G273800--Sobic007G077100 Sobic003G341100 Sobic003G341100 Sobic006G273800--Sobic003G341100 Sobic001G370600 Sobic001G370600 Sobic006G273800--Sobic001G370600 Sobic003G416500 Sobic003G416500 Sobic006G273800--Sobic003G416500 Sobic001G064900 Sobic001G064900 Sobic006G273800--Sobic001G064900 Sobic001G035000 Sobic001G035000 Sobic006G273800--Sobic001G035000 Sobic010G234000 Sobic010G234000 Sobic006G273800--Sobic010G234000 Sobic007G077100--Sobic010G023200 Sobic007G077100--Sobic009G217500 Sobic007G077100--Sobic006G273800 Sobic007G077100--Sobic003G416500 Sobic007G077100--Sobic003G341100 Sobic006G259000 Sobic006G259000 Sobic007G077100--Sobic006G259000 Sobic007G077200 Sobic007G077200 Sobic007G077100--Sobic007G077200 Sobic010G071000 Sobic010G071000 Sobic007G077100--Sobic010G071000 Sobic001G489500 Sobic001G489500 Sobic007G077100--Sobic001G489500 Sobic003G154800--Sobic007G100900 Sobic003G154800--Sobic003G046200 Sobic003G318650 Sobic003G318650 Sobic003G154800--Sobic003G318650 Sobic003G154800--Sobic002G013500 Sobic002G085700 Sobic002G085700 Sobic003G154800--Sobic002G085700 Sobic010G140800 Sobic010G140800 Sobic003G154800--Sobic010G140800 Sobic003G154800--Sobic004G327100 Sobic003G154800--Sobic001G349800 Sobic005G201800 Sobic005G201800 Sobic003G154800--Sobic005G201800
Octagon: transcription factors


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