Gene annotation
Transcriptome id Sobic.001G080600.2,Sobic.001G080600.1
Synonym Sb01g007260
Functional annotation expressed protein
UniProt C5X043
Pfam -
Panther DB PTHR33167 PTHR33167:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G67390 : -
RAP-DB (Rice) LOC_Os03g55400.1 : expressed protein
MaizeGDB (Corn) Zm00025a008262 , Zm00025a016746
Brachypodium -
Barley HORVU5Hr1G097290.2 , HORVU5Hr1G097290.3 , HORVU5Hr1G097290.1 , HORVU5Hr1G097290.4
Wheat TraesCS5B02G405100 , TraesCS5D02G410300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G216800 expressed protein -
2 Sobic.001G397700 DNAJ heat shock N-terminal domain-containing protein, putative, expressed -
3 Sobic.006G003000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
4 Sobic.003G300100 bZIP transcription factor domain containing protein, expressed -
5 Sobic.009G123000 expressed protein -
6 Sobic.002G004500 expressed protein -
7 Sobic.002G390600 sec20 domain containing protein, expressed K08494: novel plant SNARE
8 Sobic.003G127600 ubiquitin-conjugating enzyme, putative, expressed K06688: UBE2C, ubiquitin-conjugating enzyme E2 C
9 Sobic.001G230400 pectate lyase precursor, putative, expressed K01728: pectate lyase
10 Sobic.010G161300 receptor-like kinase, putative, expressed -
11 Sobic.004G326000 RING-H2 finger protein, putative, expressed -
12 Sobic.001G416900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
13 Sobic.003G399400 expressed protein -
14 Sobic.004G327150 - -
15 Sobic.003G286400 DUF623 domain containing protein, expressed -
16 Sobic.004G115600 HMG1/2, putative, expressed K09273: upstream-binding transcription factor
17 Sobic.001G008400 brevis radix, putative, expressed -
18 Sobic.009G155500 cytochrome P450, putative, expressed -
19 Sobic.009G167500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
20 Sobic.002G279300 tetratricopeptide repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic001G080600 Sobic001G080600 Sobic001G216800 Sobic001G216800 Sobic001G080600--Sobic001G216800 Sobic001G397700 Sobic001G397700 Sobic001G080600--Sobic001G397700 Sobic006G003000 Sobic006G003000 Sobic001G080600--Sobic006G003000 Sobic003G300100 Sobic003G300100 Sobic001G080600--Sobic003G300100 Sobic009G123000 Sobic009G123000 Sobic001G080600--Sobic009G123000 Sobic002G004500 Sobic002G004500 Sobic001G080600--Sobic002G004500 Sobic002G390600 Sobic002G390600 Sobic001G080600--Sobic002G390600 Sobic003G127600 Sobic003G127600 Sobic001G080600--Sobic003G127600 Sobic001G230400 Sobic001G230400 Sobic001G080600--Sobic001G230400 Sobic001G416900 Sobic001G416900 Sobic001G216800--Sobic001G416900 Sobic004G025200 Sobic004G025200 Sobic001G216800--Sobic004G025200 Sobic001G216800--Sobic001G080600 Sobic010G013100 Sobic010G013100 Sobic001G216800--Sobic010G013100 Sobic001G430000 Sobic001G430000 Sobic001G216800--Sobic001G430000 Sobic002G209300 Sobic002G209300 Sobic001G216800--Sobic002G209300 Sobic003G184500 Sobic003G184500 Sobic001G216800--Sobic003G184500 Sobic003G399400 Sobic003G399400 Sobic001G216800--Sobic003G399400 Sobic010G099400 Sobic010G099400 Sobic001G216800--Sobic010G099400 Sobic001G397700--Sobic003G300100 Sobic008G156900 Sobic008G156900 Sobic001G397700--Sobic008G156900 Sobic004G107900 Sobic004G107900 Sobic001G397700--Sobic004G107900 Sobic001G409700 Sobic001G409700 Sobic001G397700--Sobic001G409700 Sobic001G098900 Sobic001G098900 Sobic001G397700--Sobic001G098900 Sobic004G133000 Sobic004G133000 Sobic001G397700--Sobic004G133000 Sobic001G026700 Sobic001G026700 Sobic001G397700--Sobic001G026700 Sobic001G244400 Sobic001G244400 Sobic001G397700--Sobic001G244400 Sobic010G215300 Sobic010G215300 Sobic001G397700--Sobic010G215300 Sobic006G003000--Sobic009G123000 Sobic005G198300 Sobic005G198300 Sobic006G003000--Sobic005G198300 Sobic010G194500 Sobic010G194500 Sobic006G003000--Sobic010G194500 Sobic001G005000 Sobic001G005000 Sobic006G003000--Sobic001G005000 Sobic006G018900 Sobic006G018900 Sobic006G003000--Sobic006G018900 Sobic001G148600 Sobic001G148600 Sobic006G003000--Sobic001G148600 Sobic001G239400 Sobic001G239400 Sobic006G003000--Sobic001G239400 Sobic010G014300 Sobic010G014300 Sobic006G003000--Sobic010G014300 Sobic010G161300 Sobic010G161300 Sobic006G003000--Sobic010G161300 Sobic002G279300 Sobic002G279300 Sobic003G300100--Sobic002G279300 Sobic003G300100--Sobic008G156900 Sobic003G300100--Sobic001G397700 Sobic004G115600 Sobic004G115600 Sobic003G300100--Sobic004G115600 Sobic001G331100 Sobic001G331100 Sobic003G300100--Sobic001G331100 Sobic001G253900 Sobic001G253900 Sobic003G300100--Sobic001G253900 Sobic001G458900 Sobic001G458900 Sobic003G300100--Sobic001G458900 Sobic008G083300 Sobic008G083300 Sobic003G300100--Sobic008G083300 Sobic001G451800 Sobic001G451800 Sobic003G300100--Sobic001G451800 Sobic009G123000--Sobic003G127600 Sobic001G416800 Sobic001G416800 Sobic009G123000--Sobic001G416800 Sobic009G123000--Sobic005G198300 Sobic009G123000--Sobic006G003000 Sobic009G123000--Sobic001G416900 Sobic009G123000--Sobic001G148600 Sobic008G061000 Sobic008G061000 Sobic009G123000--Sobic008G061000 Sobic009G155500 Sobic009G155500 Sobic009G123000--Sobic009G155500 Sobic009G123000--Sobic010G161300 Sobic002G004500--Sobic003G399400 Sobic006G108700 Sobic006G108700 Sobic002G004500--Sobic006G108700 Sobic006G228100 Sobic006G228100 Sobic002G004500--Sobic006G228100 Sobic006G271100 Sobic006G271100 Sobic002G004500--Sobic006G271100 Sobic001G399400 Sobic001G399400 Sobic002G004500--Sobic001G399400 Sobic002G219500 Sobic002G219500 Sobic002G004500--Sobic002G219500 Sobic004G225400 Sobic004G225400 Sobic002G004500--Sobic004G225400 Sobic002G004500--Sobic003G184500 Sobic001G530300 Sobic001G530300 Sobic002G004500--Sobic001G530300 Sobic002G390600--Sobic004G133000 Sobic009G167500 Sobic009G167500 Sobic002G390600--Sobic009G167500 Sobic002G390600--Sobic001G397700 Sobic002G390600--Sobic006G003000 Sobic002G005400 Sobic002G005400 Sobic002G390600--Sobic002G005400 Sobic001G496700 Sobic001G496700 Sobic002G390600--Sobic001G496700 Sobic004G189600 Sobic004G189600 Sobic002G390600--Sobic004G189600 Sobic002G390600--Sobic008G156900 Sobic002G390600--Sobic004G107900 Sobic003G127600--Sobic001G416800 Sobic003G127600--Sobic009G123000 Sobic003G127600--Sobic001G416900 Sobic002G056300 Sobic002G056300 Sobic003G127600--Sobic002G056300 Sobic002G059200 Sobic002G059200 Sobic003G127600--Sobic002G059200 Sobic004G227000 Sobic004G227000 Sobic003G127600--Sobic004G227000 Sobic003G127600--Sobic008G061000 Sobic004G128600 Sobic004G128600 Sobic003G127600--Sobic004G128600 Sobic002G403400 Sobic002G403400 Sobic003G127600--Sobic002G403400 Sobic001G247700 Sobic001G247700 Sobic001G230400--Sobic001G247700 Sobic010G246500 Sobic010G246500 Sobic001G230400--Sobic010G246500 Sobic009G254400 Sobic009G254400 Sobic001G230400--Sobic009G254400 Sobic002G194500 Sobic002G194500 Sobic001G230400--Sobic002G194500 Sobic001G263500 Sobic001G263500 Sobic001G230400--Sobic001G263500 Sobic003G406500 Sobic003G406500 Sobic001G230400--Sobic003G406500 Sobic003G432000 Sobic003G432000 Sobic001G230400--Sobic003G432000 Sobic004G327150 Sobic004G327150 Sobic001G230400--Sobic004G327150 Sobic006G108100 Sobic006G108100 Sobic001G230400--Sobic006G108100
Octagon: transcription factors


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