Gene annotation
Transcriptome id Sobic.001G094400.1
Synonym TCH1, CAM1, ACAM-1
Functional annotation OsCML4 - Calmodulin-related calcium sensor protein, expressed
UniProt A0A1B6QI45
Pfam PF13499
Panther DB PTHR23050 PTHR23050:SF198
NCBI CDD KOG0027; Calmodulin and related proteins (EF-Hand superfamily)
KEGG Orthology K02183; calmodulin
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G37780 : calmodulin 1
RAP-DB (Rice) LOC_Os03g53200.1 : OsCML4 - Calmodulin-related calcium sensor protein, expressed
MaizeGDB (Corn) Zm00025a008102
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G180600 expressed protein K17968: TRIAP1, TRIAP1/MDM35 family protein
2 Sobic.003G429300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@NADPH quinone oxidoreductase, putative, expressed -
3 Sobic.002G261800 snRK1-interacting protein 1, putative, expressed -
4 Sobic.010G228000 Protein kinase domain containing protein, expressed -
5 Sobic.001G206400 fiber protein Fb34, putative, expressed -
6 Sobic.004G325700 CYPRO4, putative, expressed -
7 Sobic.001G064800 expp1 protein precursor, putative, expressed -
8 Sobic.007G171000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
9 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
10 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
11 Sobic.006G141500 expressed protein -
12 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
13 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
14 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
15 Sobic.003G275100 green ripe-like, putative, expressed -
16 Sobic.008G161000 protein kinase domain containing protein, expressed -
17 Sobic.010G204300 expressed protein -
18 Sobic.009G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
19 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
20 Sobic.002G195900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G094400 Sobic001G094400 Sobic002G180600 Sobic002G180600 Sobic001G094400--Sobic002G180600 Sobic003G429300 Sobic003G429300 Sobic001G094400--Sobic003G429300 Sobic002G261800 Sobic002G261800 Sobic001G094400--Sobic002G261800 Sobic010G228000 Sobic010G228000 Sobic001G094400--Sobic010G228000 Sobic001G206400 Sobic001G206400 Sobic001G094400--Sobic001G206400 Sobic004G325700 Sobic004G325700 Sobic001G094400--Sobic004G325700 Sobic001G064800 Sobic001G064800 Sobic001G094400--Sobic001G064800 Sobic007G171000 Sobic007G171000 Sobic001G094400--Sobic007G171000 Sobic006G062800 Sobic006G062800 Sobic001G094400--Sobic006G062800 Sobic002G264400 Sobic002G264400 Sobic002G180600--Sobic002G264400 Sobic006G264300 Sobic006G264300 Sobic002G180600--Sobic006G264300 Sobic002G282400 Sobic002G282400 Sobic002G180600--Sobic002G282400 Sobic010G253800 Sobic010G253800 Sobic002G180600--Sobic010G253800 Sobic006G141500 Sobic006G141500 Sobic002G180600--Sobic006G141500 Sobic002G249000 Sobic002G249000 Sobic002G180600--Sobic002G249000 Sobic003G333400 Sobic003G333400 Sobic002G180600--Sobic003G333400 Sobic001G329100 Sobic001G329100 Sobic002G180600--Sobic001G329100 Sobic010G071900 Sobic010G071900 Sobic002G180600--Sobic010G071900 Sobic003G429300--Sobic007G171000 Sobic006G179500 Sobic006G179500 Sobic003G429300--Sobic006G179500 Sobic008G111100 Sobic008G111100 Sobic003G429300--Sobic008G111100 Sobic002G224100 Sobic002G224100 Sobic003G429300--Sobic002G224100 Sobic003G019200 Sobic003G019200 Sobic003G429300--Sobic003G019200 Sobic002G195900 Sobic002G195900 Sobic003G429300--Sobic002G195900 Sobic006G228300 Sobic006G228300 Sobic003G429300--Sobic006G228300 Sobic010G200700 Sobic010G200700 Sobic003G429300--Sobic010G200700 Sobic002G359300 Sobic002G359300 Sobic003G429300--Sobic002G359300 Sobic002G261800--Sobic001G064800 Sobic002G261800--Sobic006G141500 Sobic002G261800--Sobic002G282400 Sobic006G204300 Sobic006G204300 Sobic002G261800--Sobic006G204300 Sobic010G153100 Sobic010G153100 Sobic002G261800--Sobic010G153100 Sobic004G172700 Sobic004G172700 Sobic002G261800--Sobic004G172700 Sobic001G445800 Sobic001G445800 Sobic002G261800--Sobic001G445800 Sobic009G016201 Sobic009G016201 Sobic002G261800--Sobic009G016201 Sobic002G261800--Sobic002G180600 Sobic002G374100 Sobic002G374100 Sobic010G228000--Sobic002G374100 Sobic002G118600 Sobic002G118600 Sobic010G228000--Sobic002G118600 Sobic007G188100 Sobic007G188100 Sobic010G228000--Sobic007G188100 Sobic002G294700 Sobic002G294700 Sobic010G228000--Sobic002G294700 Sobic002G330300 Sobic002G330300 Sobic010G228000--Sobic002G330300 Sobic004G280800 Sobic004G280800 Sobic010G228000--Sobic004G280800 Sobic010G246000 Sobic010G246000 Sobic010G228000--Sobic010G246000 Sobic002G379400 Sobic002G379400 Sobic010G228000--Sobic002G379400 Sobic001G290400 Sobic001G290400 Sobic010G228000--Sobic001G290400 Sobic009G033700 Sobic009G033700 Sobic001G206400--Sobic009G033700 Sobic001G516600 Sobic001G516600 Sobic001G206400--Sobic001G516600 Sobic002G245100 Sobic002G245100 Sobic001G206400--Sobic002G245100 Sobic003G037800 Sobic003G037800 Sobic001G206400--Sobic003G037800 Sobic009G200700 Sobic009G200700 Sobic001G206400--Sobic009G200700 Sobic001G206400--Sobic002G374100 Sobic010G268400 Sobic010G268400 Sobic001G206400--Sobic010G268400 Sobic010G086200 Sobic010G086200 Sobic001G206400--Sobic010G086200 Sobic001G281400 Sobic001G281400 Sobic001G206400--Sobic001G281400 Sobic008G161000 Sobic008G161000 Sobic004G325700--Sobic008G161000 Sobic004G325700--Sobic006G179500 Sobic003G181500 Sobic003G181500 Sobic004G325700--Sobic003G181500 Sobic002G140300 Sobic002G140300 Sobic004G325700--Sobic002G140300 Sobic003G249800 Sobic003G249800 Sobic004G325700--Sobic003G249800 Sobic001G304700 Sobic001G304700 Sobic004G325700--Sobic001G304700 Sobic004G325700--Sobic009G033700 Sobic001G095300 Sobic001G095300 Sobic004G325700--Sobic001G095300 Sobic004G325700--Sobic006G062800 Sobic006G182100 Sobic006G182100 Sobic001G064800--Sobic006G182100 Sobic001G064800--Sobic002G261800 Sobic001G067601 Sobic001G067601 Sobic001G064800--Sobic001G067601 Sobic001G064800--Sobic010G153100 Sobic001G019900 Sobic001G019900 Sobic001G064800--Sobic001G019900 Sobic001G064800--Sobic001G445800 Sobic010G204300 Sobic010G204300 Sobic001G064800--Sobic010G204300 Sobic004G157800 Sobic004G157800 Sobic001G064800--Sobic004G157800 Sobic001G064800--Sobic001G206400 Sobic009G155200 Sobic009G155200 Sobic007G171000--Sobic009G155200 Sobic007G171000--Sobic002G195900 Sobic007G171000--Sobic003G429300 Sobic001G119000 Sobic001G119000 Sobic007G171000--Sobic001G119000 Sobic009G177800 Sobic009G177800 Sobic007G171000--Sobic009G177800 Sobic007G171000--Sobic002G359300 Sobic002G046100 Sobic002G046100 Sobic007G171000--Sobic002G046100 Sobic007G171000--Sobic008G111100 Sobic007G137700 Sobic007G137700 Sobic007G171000--Sobic007G137700 Sobic010G213400 Sobic010G213400 Sobic006G062800--Sobic010G213400 Sobic006G062800--Sobic003G249800 Sobic003G285800 Sobic003G285800 Sobic006G062800--Sobic003G285800 Sobic007G059900 Sobic007G059900 Sobic006G062800--Sobic007G059900 Sobic009G129000 Sobic009G129000 Sobic006G062800--Sobic009G129000 Sobic002G218000 Sobic002G218000 Sobic006G062800--Sobic002G218000 Sobic002G202300 Sobic002G202300 Sobic006G062800--Sobic002G202300 Sobic006G062800--Sobic009G033700 Sobic002G261900 Sobic002G261900 Sobic006G062800--Sobic002G261900
Octagon: transcription factors


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