Gene annotation
Transcriptome id Sobic.001G110800.1
Synonym
Functional annotation csAtPR5, putative, expressed
UniProt A0A1B6QIF0
Pfam -
Panther DB PTHR33065 PTHR33065:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g66230.2 : csAtPR5, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G182300 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
2 Sobic.004G107600 prefoldin subunit, putative, expressed K04798: pfdB, prefoldin beta subunit
3 Sobic.002G259000 ribosomal protein L7Ae, putative, expressed K02936: RP-L7Ae, large subunit ribosomal protein L7Ae
4 Sobic.001G331900 expressed protein -
5 Sobic.001G046300 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
6 Sobic.004G152700 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
7 Sobic.004G103800 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
8 Sobic.001G377800 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
9 Sobic.009G117000 expressed protein -
10 Sobic.010G259900 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
11 Sobic.006G211200 expressed protein -
12 Sobic.003G321700 KH domain containing protein, putative, expressed K11884: PNO1, RNA-binding protein PNO1
13 Sobic.003G025200 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
14 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
15 Sobic.002G258800 ribosomal protein L7Ae, putative, expressed K02936: RP-L7Ae, large subunit ribosomal protein L7Ae
16 Sobic.009G065400 ribosomal protein L13, putative, expressed K02873: RP-L13e, large subunit ribosomal protein L13e
17 Sobic.007G212600 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
18 Sobic.004G002350 - K11088: SNRPD3, small nuclear ribonucleoprotein D3
19 Sobic.006G147000 ribosomal protein L14, putative, expressed K02875: RP-L14e, large subunit ribosomal protein L14e
20 Sobic.005G157200 prefoldin subunit, putative, expressed K09549: prefoldin subunit 2


Gene co-expression network
sample Sobic001G110800 Sobic001G110800 Sobic010G182300 Sobic010G182300 Sobic001G110800--Sobic010G182300 Sobic004G107600 Sobic004G107600 Sobic001G110800--Sobic004G107600 Sobic002G259000 Sobic002G259000 Sobic001G110800--Sobic002G259000 Sobic001G331900 Sobic001G331900 Sobic001G110800--Sobic001G331900 Sobic001G046300 Sobic001G046300 Sobic001G110800--Sobic001G046300 Sobic004G152700 Sobic004G152700 Sobic001G110800--Sobic004G152700 Sobic004G103800 Sobic004G103800 Sobic001G110800--Sobic004G103800 Sobic001G377800 Sobic001G377800 Sobic001G110800--Sobic001G377800 Sobic009G117000 Sobic009G117000 Sobic001G110800--Sobic009G117000 Sobic002G258800 Sobic002G258800 Sobic010G182300--Sobic002G258800 Sobic010G182300--Sobic002G259000 Sobic010G182300--Sobic004G152700 Sobic010G182300--Sobic004G103800 Sobic010G259900 Sobic010G259900 Sobic010G182300--Sobic010G259900 Sobic010G182300--Sobic001G046300 Sobic010G260100 Sobic010G260100 Sobic010G182300--Sobic010G260100 Sobic009G065400 Sobic009G065400 Sobic010G182300--Sobic009G065400 Sobic010G182600 Sobic010G182600 Sobic010G182300--Sobic010G182600 Sobic004G107600--Sobic001G331900 Sobic003G362400 Sobic003G362400 Sobic004G107600--Sobic003G362400 Sobic004G107600--Sobic001G377800 Sobic004G107600--Sobic010G182600 Sobic005G092800 Sobic005G092800 Sobic004G107600--Sobic005G092800 Sobic005G157200 Sobic005G157200 Sobic004G107600--Sobic005G157200 Sobic002G078400 Sobic002G078400 Sobic004G107600--Sobic002G078400 Sobic003G321700 Sobic003G321700 Sobic004G107600--Sobic003G321700 Sobic001G445800 Sobic001G445800 Sobic004G107600--Sobic001G445800 Sobic002G259000--Sobic004G103800 Sobic002G259000--Sobic004G152700 Sobic002G259000--Sobic010G182600 Sobic002G259000--Sobic001G046300 Sobic002G259000--Sobic010G182300 Sobic004G145801 Sobic004G145801 Sobic002G259000--Sobic004G145801 Sobic002G259000--Sobic002G258800 Sobic004G104100 Sobic004G104100 Sobic002G259000--Sobic004G104100 Sobic002G364100 Sobic002G364100 Sobic002G259000--Sobic002G364100 Sobic001G331900--Sobic004G107600 Sobic001G331900--Sobic005G157200 Sobic008G058300 Sobic008G058300 Sobic001G331900--Sobic008G058300 Sobic001G331900--Sobic002G078400 Sobic008G132800 Sobic008G132800 Sobic001G331900--Sobic008G132800 Sobic004G300900 Sobic004G300900 Sobic001G331900--Sobic004G300900 Sobic001G331900--Sobic001G377800 Sobic001G331900--Sobic003G362400 Sobic001G529000 Sobic001G529000 Sobic001G331900--Sobic001G529000 Sobic007G212600 Sobic007G212600 Sobic001G046300--Sobic007G212600 Sobic001G046300--Sobic004G103800 Sobic001G091801 Sobic001G091801 Sobic001G046300--Sobic001G091801 Sobic001G046300--Sobic002G364100 Sobic001G046300--Sobic002G259000 Sobic001G046300--Sobic004G104100 Sobic001G011200 Sobic001G011200 Sobic001G046300--Sobic001G011200 Sobic004G104300 Sobic004G104300 Sobic001G046300--Sobic004G104300 Sobic009G163800 Sobic009G163800 Sobic001G046300--Sobic009G163800 Sobic004G152700--Sobic004G103800 Sobic004G152700--Sobic002G259000 Sobic004G152700--Sobic004G104100 Sobic010G230700 Sobic010G230700 Sobic004G152700--Sobic010G230700 Sobic004G152700--Sobic010G182300 Sobic006G221200 Sobic006G221200 Sobic004G152700--Sobic006G221200 Sobic004G152700--Sobic004G104300 Sobic004G152700--Sobic004G145801 Sobic004G152700--Sobic010G259900 Sobic004G103800--Sobic004G104100 Sobic004G103800--Sobic004G104300 Sobic007G019000 Sobic007G019000 Sobic004G103800--Sobic007G019000 Sobic010G166100 Sobic010G166100 Sobic004G103800--Sobic010G166100 Sobic004G103800--Sobic004G152700 Sobic004G103800--Sobic001G091801 Sobic004G103800--Sobic010G230700 Sobic004G322200 Sobic004G322200 Sobic004G103800--Sobic004G322200 Sobic007G018300 Sobic007G018300 Sobic004G103800--Sobic007G018300 Sobic002G406500 Sobic002G406500 Sobic001G377800--Sobic002G406500 Sobic001G377800--Sobic004G104100 Sobic001G085400 Sobic001G085400 Sobic001G377800--Sobic001G085400 Sobic001G377800--Sobic001G091801 Sobic001G377800--Sobic007G019000 Sobic001G377800--Sobic006G221200 Sobic006G081100 Sobic006G081100 Sobic001G377800--Sobic006G081100 Sobic002G049300 Sobic002G049300 Sobic001G377800--Sobic002G049300 Sobic009G050300 Sobic009G050300 Sobic001G377800--Sobic009G050300 Sobic006G211200 Sobic006G211200 Sobic009G117000--Sobic006G211200 Sobic009G117000--Sobic007G019000 Sobic002G115000 Sobic002G115000 Sobic009G117000--Sobic002G115000 Sobic009G117000--Sobic001G377800 Sobic009G117000--Sobic004G322200 Sobic006G138100 Sobic006G138100 Sobic009G117000--Sobic006G138100 Sobic009G117000--Sobic008G058300 Sobic006G216600 Sobic006G216600 Sobic009G117000--Sobic006G216600 Sobic006G052400 Sobic006G052400 Sobic009G117000--Sobic006G052400
Octagon: transcription factors


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