Gene annotation
Transcriptome id Sobic.001G112800.2,Sobic.001G112800.3
Synonym
Functional annotation -
UniProt A0A1B6QIH4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G112800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G157000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA31 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
2 Sobic.008G021900 nucleoside-triphosphatase, putative, expressed K14641: apyrase
3 Sobic.010G063900 AP2 domain containing protein, expressed -
4 Sobic.001G528600 remorin family protein, putative, expressed -
5 Sobic.010G218300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA binding protein, putative, expressed -
6 Sobic.002G319200 expressed protein K11490: condensin-2 complex subunit H2
7 Sobic.005G164700 h/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed K11128: GAR1, H/ACA ribonucleoprotein complex subunit 1
8 Sobic.003G003700 ABIL2, putative, expressed -
9 Sobic.002G280700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
10 Sobic.001G250100 thaumatin, putative, expressed -
11 Sobic.003G294100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dihydropyrimidinase, putative, expressed K01465: URA4, dihydroorotase
12 Sobic.001G445000 cation efflux family protein, putative, expressed -
13 Sobic.008G143000 expressed protein -
14 Sobic.004G152200 glycosyltransferase, putative, expressed -
15 Sobic.003G115200 expressed protein -
16 Sobic.010G138500 lectin protein kinase family protein, putative, expressed -
17 Sobic.002G045100 LSM domain containing protein, expressed K11086: SNRPB, small nuclear ribonucleoprotein B and B'
18 Sobic.009G126500 methyltransferase, putative, expressed -
19 Sobic.006G160900 NAC domain containing protein, putative, expressed -
20 Sobic.010G014400 - -


Gene co-expression network
sample Sobic001G112800 Sobic001G112800 Sobic008G157000 Sobic008G157000 Sobic001G112800--Sobic008G157000 Sobic008G021900 Sobic008G021900 Sobic001G112800--Sobic008G021900 Sobic010G063900 Sobic010G063900 Sobic001G112800--Sobic010G063900 Sobic001G528600 Sobic001G528600 Sobic001G112800--Sobic001G528600 Sobic010G218300 Sobic010G218300 Sobic001G112800--Sobic010G218300 Sobic002G319200 Sobic002G319200 Sobic001G112800--Sobic002G319200 Sobic005G164700 Sobic005G164700 Sobic001G112800--Sobic005G164700 Sobic003G003700 Sobic003G003700 Sobic001G112800--Sobic003G003700 Sobic002G280700 Sobic002G280700 Sobic001G112800--Sobic002G280700 Sobic002G357800 Sobic002G357800 Sobic008G157000--Sobic002G357800 Sobic003G236600 Sobic003G236600 Sobic008G157000--Sobic003G236600 Sobic001G250100 Sobic001G250100 Sobic008G157000--Sobic001G250100 Sobic004G165300 Sobic004G165300 Sobic008G157000--Sobic004G165300 Sobic008G157000--Sobic003G003700 Sobic003G426200 Sobic003G426200 Sobic008G157000--Sobic003G426200 Sobic008G157000--Sobic001G112800 Sobic008G157000--Sobic010G218300 Sobic002G094600 Sobic002G094600 Sobic008G157000--Sobic002G094600 Sobic008G021900--Sobic001G250100 Sobic003G151300 Sobic003G151300 Sobic008G021900--Sobic003G151300 Sobic008G021900--Sobic001G112800 Sobic003G366300 Sobic003G366300 Sobic008G021900--Sobic003G366300 Sobic008G021900--Sobic008G157000 Sobic010G014400 Sobic010G014400 Sobic008G021900--Sobic010G014400 Sobic001G365200 Sobic001G365200 Sobic008G021900--Sobic001G365200 Sobic003G099166 Sobic003G099166 Sobic008G021900--Sobic003G099166 Sobic008G021900--Sobic010G218300 Sobic002G085800 Sobic002G085800 Sobic010G063900--Sobic002G085800 Sobic009G098000 Sobic009G098000 Sobic010G063900--Sobic009G098000 Sobic003G176300 Sobic003G176300 Sobic010G063900--Sobic003G176300 Sobic010G066800 Sobic010G066800 Sobic010G063900--Sobic010G066800 Sobic010G241800 Sobic010G241800 Sobic010G063900--Sobic010G241800 Sobic003G426500 Sobic003G426500 Sobic010G063900--Sobic003G426500 Sobic002G068000 Sobic002G068000 Sobic010G063900--Sobic002G068000 Sobic005G216700 Sobic005G216700 Sobic010G063900--Sobic005G216700 Sobic003G182200 Sobic003G182200 Sobic010G063900--Sobic003G182200 Sobic001G078600 Sobic001G078600 Sobic001G528600--Sobic001G078600 Sobic001G107200 Sobic001G107200 Sobic001G528600--Sobic001G107200 Sobic001G528600--Sobic002G280700 Sobic004G152200 Sobic004G152200 Sobic001G528600--Sobic004G152200 Sobic006G191700 Sobic006G191700 Sobic001G528600--Sobic006G191700 Sobic010G274000 Sobic010G274000 Sobic001G528600--Sobic010G274000 Sobic004G331200 Sobic004G331200 Sobic001G528600--Sobic004G331200 Sobic005G047100 Sobic005G047100 Sobic001G528600--Sobic005G047100 Sobic006G102900 Sobic006G102900 Sobic001G528600--Sobic006G102900 Sobic001G460400 Sobic001G460400 Sobic010G218300--Sobic001G460400 Sobic002G283900 Sobic002G283900 Sobic010G218300--Sobic002G283900 Sobic004G161900 Sobic004G161900 Sobic010G218300--Sobic004G161900 Sobic010G045400 Sobic010G045400 Sobic010G218300--Sobic010G045400 Sobic006G160900 Sobic006G160900 Sobic010G218300--Sobic006G160900 Sobic009G238900 Sobic009G238900 Sobic010G218300--Sobic009G238900 Sobic008G191400 Sobic008G191400 Sobic010G218300--Sobic008G191400 Sobic009G221500 Sobic009G221500 Sobic010G218300--Sobic009G221500 Sobic001G245800 Sobic001G245800 Sobic010G218300--Sobic001G245800 Sobic002G045100 Sobic002G045100 Sobic002G319200--Sobic002G045100 Sobic001G242800 Sobic001G242800 Sobic002G319200--Sobic001G242800 Sobic001G371100 Sobic001G371100 Sobic002G319200--Sobic001G371100 Sobic005G211200 Sobic005G211200 Sobic002G319200--Sobic005G211200 Sobic010G032700 Sobic010G032700 Sobic002G319200--Sobic010G032700 Sobic002G319200--Sobic001G528600 Sobic002G319200--Sobic004G152200 Sobic009G126500 Sobic009G126500 Sobic002G319200--Sobic009G126500 Sobic002G161700 Sobic002G161700 Sobic002G319200--Sobic002G161700 Sobic007G034400 Sobic007G034400 Sobic005G164700--Sobic007G034400 Sobic002G115000 Sobic002G115000 Sobic005G164700--Sobic002G115000 Sobic006G201500 Sobic006G201500 Sobic005G164700--Sobic006G201500 Sobic005G164700--Sobic002G045100 Sobic008G135000 Sobic008G135000 Sobic005G164700--Sobic008G135000 Sobic001G085400 Sobic001G085400 Sobic005G164700--Sobic001G085400 Sobic008G021100 Sobic008G021100 Sobic005G164700--Sobic008G021100 Sobic001G058900 Sobic001G058900 Sobic005G164700--Sobic001G058900 Sobic006G156000 Sobic006G156000 Sobic005G164700--Sobic006G156000 Sobic001G468500 Sobic001G468500 Sobic003G003700--Sobic001G468500 Sobic003G420100 Sobic003G420100 Sobic003G003700--Sobic003G420100 Sobic008G143000 Sobic008G143000 Sobic003G003700--Sobic008G143000 Sobic009G242501 Sobic009G242501 Sobic003G003700--Sobic009G242501 Sobic003G247600 Sobic003G247600 Sobic003G003700--Sobic003G247600 Sobic003G003700--Sobic001G528600 Sobic008G035900 Sobic008G035900 Sobic003G003700--Sobic008G035900 Sobic003G003700--Sobic008G157000 Sobic004G286700 Sobic004G286700 Sobic003G003700--Sobic004G286700 Sobic009G088200 Sobic009G088200 Sobic002G280700--Sobic009G088200 Sobic002G280700--Sobic001G528600 Sobic007G152900 Sobic007G152900 Sobic002G280700--Sobic007G152900 Sobic002G280700--Sobic010G032700 Sobic003G396600 Sobic003G396600 Sobic002G280700--Sobic003G396600 Sobic002G280700--Sobic001G371100 Sobic003G294100 Sobic003G294100 Sobic002G280700--Sobic003G294100 Sobic002G280700--Sobic005G164700 Sobic001G397000 Sobic001G397000 Sobic002G280700--Sobic001G397000
Octagon: transcription factors


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