Gene annotation
Transcriptome id Sobic.001G130100.1
Synonym Sb01g011410
Functional annotation expressed protein
UniProt C5WNY9
Pfam -
Panther DB PTHR36764 PTHR36764:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G47850 : -
RAP-DB (Rice) LOC_Os05g13390.1 : expressed protein
MaizeGDB (Corn) Zm00025a007673
Brachypodium KQK13704
Barley HORVU4Hr1G005460.3 , HORVU4Hr1G005460.2 , HORVU4Hr1G005460.1
Wheat TraesCS3B02G282800 , TraesCS4A02G279600 , TraesCS4A02G279600 , TraesCS4B02G032800 , TraesCS4A02G261900 , TraesCS4A02G182100 , TraesCS4D02G031200
Populus -


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cDNA sequences
Sobic.001G130100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G417700 DUF623 domain containing protein, expressed -
2 Sobic.001G347400 expressed protein -
3 Sobic.003G014900 expressed protein -
4 Sobic.004G109400 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.001G228400 OsFBX217 - F-box domain containing protein, expressed -
6 Sobic.007G064400 glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
7 Sobic.010G009250 - -
8 Sobic.002G326900 expressed protein K16584: HAUS augmin-like complex subunit 1
9 Sobic.001G177400 frigida, putative, expressed -
10 Sobic.001G129500 - -
11 Sobic.001G234000 expressed protein -
12 Sobic.007G156400 Up-reguralion under drought(PubMedID : 24916767)@alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
13 Sobic.006G264100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BTBN13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
14 Sobic.006G022301 - -
15 Sobic.002G193000 EARLY flowering protein, putative, expressed -
16 Sobic.004G257500 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
17 Sobic.006G120400 no apical meristem protein, putative, expressed -
18 Sobic.007G167300 zinc-binding protein, putative, expressed -
19 Sobic.001G042800 nudix hydrolase homolog 16(PubMedID : 26465154)@nudix hydrolase homolog 16(PubMedID : 26465154)@hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
20 Sobic.002G059100 OsFBX239 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G130100 Sobic001G130100 Sobic002G417700 Sobic002G417700 Sobic001G130100--Sobic002G417700 Sobic001G347400 Sobic001G347400 Sobic001G130100--Sobic001G347400 Sobic003G014900 Sobic003G014900 Sobic001G130100--Sobic003G014900 Sobic004G109400 Sobic004G109400 Sobic001G130100--Sobic004G109400 Sobic001G228400 Sobic001G228400 Sobic001G130100--Sobic001G228400 Sobic007G064400 Sobic007G064400 Sobic001G130100--Sobic007G064400 Sobic010G009250 Sobic010G009250 Sobic001G130100--Sobic010G009250 Sobic002G326900 Sobic002G326900 Sobic001G130100--Sobic002G326900 Sobic001G177400 Sobic001G177400 Sobic001G130100--Sobic001G177400 Sobic007G156400 Sobic007G156400 Sobic002G417700--Sobic007G156400 Sobic007G072700 Sobic007G072700 Sobic002G417700--Sobic007G072700 Sobic002G236300 Sobic002G236300 Sobic002G417700--Sobic002G236300 Sobic004G264800 Sobic004G264800 Sobic002G417700--Sobic004G264800 Sobic004G282200 Sobic004G282200 Sobic002G417700--Sobic004G282200 Sobic002G417700--Sobic007G064400 Sobic002G417700--Sobic001G130100 Sobic002G417700--Sobic001G347400 Sobic001G371650 Sobic001G371650 Sobic002G417700--Sobic001G371650 Sobic001G347400--Sobic002G417700 Sobic001G347400--Sobic010G009250 Sobic001G395000 Sobic001G395000 Sobic001G347400--Sobic001G395000 Sobic006G094000 Sobic006G094000 Sobic001G347400--Sobic006G094000 Sobic004G187200 Sobic004G187200 Sobic001G347400--Sobic004G187200 Sobic009G029900 Sobic009G029900 Sobic001G347400--Sobic009G029900 Sobic001G347400--Sobic001G130100 Sobic007G060550 Sobic007G060550 Sobic001G347400--Sobic007G060550 Sobic001G347400--Sobic007G064400 Sobic001G384600 Sobic001G384600 Sobic003G014900--Sobic001G384600 Sobic003G014900--Sobic001G228400 Sobic004G207000 Sobic004G207000 Sobic003G014900--Sobic004G207000 Sobic009G031500 Sobic009G031500 Sobic003G014900--Sobic009G031500 Sobic006G126600 Sobic006G126600 Sobic003G014900--Sobic006G126600 Sobic002G053200 Sobic002G053200 Sobic003G014900--Sobic002G053200 Sobic005G177900 Sobic005G177900 Sobic003G014900--Sobic005G177900 Sobic010G170900 Sobic010G170900 Sobic003G014900--Sobic010G170900 Sobic001G393401 Sobic001G393401 Sobic003G014900--Sobic001G393401 Sobic004G109400--Sobic007G064400 Sobic001G234000 Sobic001G234000 Sobic004G109400--Sobic001G234000 Sobic007G127700 Sobic007G127700 Sobic004G109400--Sobic007G127700 Sobic001G297300 Sobic001G297300 Sobic004G109400--Sobic001G297300 Sobic007G069800 Sobic007G069800 Sobic004G109400--Sobic007G069800 Sobic004G090200 Sobic004G090200 Sobic004G109400--Sobic004G090200 Sobic006G279000 Sobic006G279000 Sobic004G109400--Sobic006G279000 Sobic002G059100 Sobic002G059100 Sobic004G109400--Sobic002G059100 Sobic004G109400--Sobic004G187200 Sobic001G228400--Sobic001G384600 Sobic001G228400--Sobic005G177900 Sobic001G228400--Sobic006G126600 Sobic002G341100 Sobic002G341100 Sobic001G228400--Sobic002G341100 Sobic010G262900 Sobic010G262900 Sobic001G228400--Sobic010G262900 Sobic008G056200 Sobic008G056200 Sobic001G228400--Sobic008G056200 Sobic006G250100 Sobic006G250100 Sobic001G228400--Sobic006G250100 Sobic001G228400--Sobic003G014900 Sobic003G035500 Sobic003G035500 Sobic001G228400--Sobic003G035500 Sobic007G064400--Sobic001G234000 Sobic007G064400--Sobic004G187200 Sobic004G090300 Sobic004G090300 Sobic007G064400--Sobic004G090300 Sobic007G064400--Sobic006G279000 Sobic007G064400--Sobic004G090200 Sobic007G064400--Sobic002G059100 Sobic007G064400--Sobic007G156400 Sobic007G064400--Sobic001G297300 Sobic002G147500 Sobic002G147500 Sobic007G064400--Sobic002G147500 Sobic004G200400 Sobic004G200400 Sobic010G009250--Sobic004G200400 Sobic009G122375 Sobic009G122375 Sobic010G009250--Sobic009G122375 Sobic010G009250--Sobic004G187200 Sobic003G412200 Sobic003G412200 Sobic010G009250--Sobic003G412200 Sobic005G052100 Sobic005G052100 Sobic010G009250--Sobic005G052100 Sobic002G104300 Sobic002G104300 Sobic010G009250--Sobic002G104300 Sobic001G330600 Sobic001G330600 Sobic010G009250--Sobic001G330600 Sobic010G009250--Sobic004G090200 Sobic001G083900 Sobic001G083900 Sobic010G009250--Sobic001G083900 Sobic006G151300 Sobic006G151300 Sobic002G326900--Sobic006G151300 Sobic010G058400 Sobic010G058400 Sobic002G326900--Sobic010G058400 Sobic001G043700 Sobic001G043700 Sobic002G326900--Sobic001G043700 Sobic002G074500 Sobic002G074500 Sobic002G326900--Sobic002G074500 Sobic001G127600 Sobic001G127600 Sobic002G326900--Sobic001G127600 Sobic003G203900 Sobic003G203900 Sobic002G326900--Sobic003G203900 Sobic004G330300 Sobic004G330300 Sobic002G326900--Sobic004G330300 Sobic003G384100 Sobic003G384100 Sobic002G326900--Sobic003G384100 Sobic004G041100 Sobic004G041100 Sobic002G326900--Sobic004G041100 Sobic003G369700 Sobic003G369700 Sobic001G177400--Sobic003G369700 Sobic001G177400--Sobic006G094000 Sobic003G198080 Sobic003G198080 Sobic001G177400--Sobic003G198080 Sobic001G450200 Sobic001G450200 Sobic001G177400--Sobic001G450200 Sobic006G155300 Sobic006G155300 Sobic001G177400--Sobic006G155300 Sobic001G469300 Sobic001G469300 Sobic001G177400--Sobic001G469300 Sobic004G322500 Sobic004G322500 Sobic001G177400--Sobic004G322500 Sobic001G164700 Sobic001G164700 Sobic001G177400--Sobic001G164700 Sobic004G020150 Sobic004G020150 Sobic001G177400--Sobic004G020150
Octagon: transcription factors


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