Gene annotation
Transcriptome id Sobic.001G137300.1
Synonym GATA26
Functional annotation GATA zinc finger domain containing protein, expressed
UniProt A0A1B6QIV8
Pfam PF00320
Panther DB PTHR10071 PTHR10071:SF159
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G17570 : GATA transcription factor 26
RAP-DB (Rice) LOC_Os04g46020.1 : GATA zinc finger domain containing protein, expressed
MaizeGDB (Corn) Zm00025a010374 , Zm00025a056653
Brachypodium -
Barley -
Wheat TraesCS2D02G390000 , TraesCS2D02G568600 , TraesCS2D02G568600 , TraesCS2A02G561300 , TraesCS2A02G561300 , TraesCS2B02G410200 , TraesCS2B02G410200 , TraesCS2B02G618500 , TraesCS2A02G391700 , TraesCS2A02G391700
Populus -


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cDNA sequences
Sobic.001G137300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G007000 DUF250 domain containing protein, putative, expressed K15356: VRG4, GDP-mannose transporter
2 Sobic.003G344900 selT-like protein precursor, putative, expressed -
3 Sobic.002G352600 expressed protein -
4 Sobic.009G217100 phosphatidylinositol transfer, putative, expressed -
5 Sobic.001G137100 homeodomain protein, putative, expressed -
6 Sobic.006G226100 thioredoxin, putative, expressed K03671: thioredoxin 1
7 Sobic.001G121200 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.004G348300 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
9 Sobic.003G063000 expressed protein -
10 Sobic.010G000900 spotted leaf 11, putative, expressed -
11 Sobic.007G177000 OsAPx4 - Peroxisomal Ascorbate Peroxidase encoding gene 5,8,9, expressed K00434: L-ascorbate peroxidase
12 Sobic.010G001500 AML1, putative, expressed -
13 Sobic.006G049300 nitrate-induced NOI protein, expressed K13456: RPM1-interacting protein 4
14 Sobic.001G123000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
15 Sobic.004G006200 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
16 Sobic.010G239700 cysteine-rich RLK (RECEPTOR-like protein kinase) 10(PubMedID : 28640841)@TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed -
17 Sobic.004G183600 molybdenum cofactor biosynthesis protein 1, putative, expressed K03639: moaA, GTP 3',8-cyclase
18 Sobic.008G076800 expressed protein -
19 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
20 Sobic.007G207900 AT hook motif domain containing protein, expressed -


Gene co-expression network
sample Sobic001G137300 Sobic001G137300 Sobic007G007000 Sobic007G007000 Sobic001G137300--Sobic007G007000 Sobic003G344900 Sobic003G344900 Sobic001G137300--Sobic003G344900 Sobic002G352600 Sobic002G352600 Sobic001G137300--Sobic002G352600 Sobic009G217100 Sobic009G217100 Sobic001G137300--Sobic009G217100 Sobic001G137100 Sobic001G137100 Sobic001G137300--Sobic001G137100 Sobic006G226100 Sobic006G226100 Sobic001G137300--Sobic006G226100 Sobic001G121200 Sobic001G121200 Sobic001G137300--Sobic001G121200 Sobic004G348300 Sobic004G348300 Sobic001G137300--Sobic004G348300 Sobic003G063000 Sobic003G063000 Sobic001G137300--Sobic003G063000 Sobic007G007000--Sobic009G217100 Sobic001G123000 Sobic001G123000 Sobic007G007000--Sobic001G123000 Sobic007G007000--Sobic001G137300 Sobic002G251700 Sobic002G251700 Sobic007G007000--Sobic002G251700 Sobic009G259400 Sobic009G259400 Sobic007G007000--Sobic009G259400 Sobic010G000900 Sobic010G000900 Sobic007G007000--Sobic010G000900 Sobic007G007000--Sobic002G352600 Sobic007G007000--Sobic001G121200 Sobic005G203800 Sobic005G203800 Sobic007G007000--Sobic005G203800 Sobic003G012200 Sobic003G012200 Sobic003G344900--Sobic003G012200 Sobic003G344900--Sobic010G000900 Sobic003G344900--Sobic004G348300 Sobic003G344900--Sobic009G259400 Sobic005G044800 Sobic005G044800 Sobic003G344900--Sobic005G044800 Sobic003G344900--Sobic001G123000 Sobic001G047400 Sobic001G047400 Sobic003G344900--Sobic001G047400 Sobic001G181700 Sobic001G181700 Sobic003G344900--Sobic001G181700 Sobic001G051200 Sobic001G051200 Sobic003G344900--Sobic001G051200 Sobic003G015900 Sobic003G015900 Sobic002G352600--Sobic003G015900 Sobic010G027600 Sobic010G027600 Sobic002G352600--Sobic010G027600 Sobic009G228700 Sobic009G228700 Sobic002G352600--Sobic009G228700 Sobic004G121100 Sobic004G121100 Sobic002G352600--Sobic004G121100 Sobic002G352600--Sobic009G217100 Sobic002G352600--Sobic001G121200 Sobic002G352600--Sobic010G000900 Sobic004G066200 Sobic004G066200 Sobic002G352600--Sobic004G066200 Sobic003G248200 Sobic003G248200 Sobic002G352600--Sobic003G248200 Sobic009G217100--Sobic009G259400 Sobic009G217100--Sobic010G000900 Sobic009G217100--Sobic007G007000 Sobic009G217100--Sobic002G352600 Sobic002G226900 Sobic002G226900 Sobic009G217100--Sobic002G226900 Sobic004G006200 Sobic004G006200 Sobic009G217100--Sobic004G006200 Sobic009G217100--Sobic004G348300 Sobic009G217100--Sobic001G137100 Sobic010G251000 Sobic010G251000 Sobic009G217100--Sobic010G251000 Sobic001G390800 Sobic001G390800 Sobic001G137100--Sobic001G390800 Sobic007G024700 Sobic007G024700 Sobic001G137100--Sobic007G024700 Sobic010G228400 Sobic010G228400 Sobic001G137100--Sobic010G228400 Sobic002G132000 Sobic002G132000 Sobic001G137100--Sobic002G132000 Sobic001G270400 Sobic001G270400 Sobic001G137100--Sobic001G270400 Sobic002G130800 Sobic002G130800 Sobic001G137100--Sobic002G130800 Sobic009G094300 Sobic009G094300 Sobic001G137100--Sobic009G094300 Sobic002G111000 Sobic002G111000 Sobic001G137100--Sobic002G111000 Sobic002G427050 Sobic002G427050 Sobic001G137100--Sobic002G427050 Sobic006G226100--Sobic001G137300 Sobic004G153501 Sobic004G153501 Sobic006G226100--Sobic004G153501 Sobic001G427200 Sobic001G427200 Sobic006G226100--Sobic001G427200 Sobic006G226100--Sobic007G007000 Sobic003G404200 Sobic003G404200 Sobic006G226100--Sobic003G404200 Sobic008G147700 Sobic008G147700 Sobic006G226100--Sobic008G147700 Sobic003G436300 Sobic003G436300 Sobic006G226100--Sobic003G436300 Sobic004G153400 Sobic004G153400 Sobic006G226100--Sobic004G153400 Sobic006G226100--Sobic001G123000 Sobic001G121200--Sobic001G390800 Sobic010G205800 Sobic010G205800 Sobic001G121200--Sobic010G205800 Sobic001G268200 Sobic001G268200 Sobic001G121200--Sobic001G268200 Sobic009G113000 Sobic009G113000 Sobic001G121200--Sobic009G113000 Sobic001G121200--Sobic002G111000 Sobic010G147100 Sobic010G147100 Sobic001G121200--Sobic010G147100 Sobic001G207000 Sobic001G207000 Sobic001G121200--Sobic001G207000 Sobic001G146800 Sobic001G146800 Sobic001G121200--Sobic001G146800 Sobic009G056200 Sobic009G056200 Sobic001G121200--Sobic009G056200 Sobic004G348300--Sobic003G012200 Sobic004G348300--Sobic003G344900 Sobic001G199100 Sobic001G199100 Sobic004G348300--Sobic001G199100 Sobic004G348300--Sobic002G352600 Sobic006G249700 Sobic006G249700 Sobic004G348300--Sobic006G249700 Sobic004G348300--Sobic004G006200 Sobic002G059300 Sobic002G059300 Sobic004G348300--Sobic002G059300 Sobic004G348300--Sobic009G217100 Sobic005G004200 Sobic005G004200 Sobic004G348300--Sobic005G004200 Sobic003G063000--Sobic009G259400 Sobic003G063000--Sobic004G006200 Sobic003G063000--Sobic004G348300 Sobic001G000200 Sobic001G000200 Sobic003G063000--Sobic001G000200 Sobic003G063000--Sobic002G352600 Sobic003G063000--Sobic009G217100 Sobic007G062600 Sobic007G062600 Sobic003G063000--Sobic007G062600 Sobic003G063000--Sobic001G121200 Sobic003G063000--Sobic004G066200
Octagon: transcription factors


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