Gene annotation
Transcriptome id Sobic.006G226100.2
Synonym ATCXXS1, Sb06g029490, CXXS1
Functional annotation thioredoxin, putative, expressed
UniProt A0A1Z5RF67
Pfam PF00085
Panther DB PTHR10438 PTHR10438:SF242
NCBI CDD KOG0907; Thioredoxin
KEGG Orthology K03671; thioredoxin 1
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0006662glycerol ether metabolic process


Orthologs (automatic annotation)
TAIR AT1G11530 : C-terminal cysteine residue is changed to a serine 1
RAP-DB (Rice) LOC_Os04g53740.1 : thioredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a057101
Brachypodium KQJ84780
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G226100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G137300 GATA zinc finger domain containing protein, expressed -
2 Sobic.004G153501 - -
3 Sobic.001G427200 josephin, putative, expressed K15235: josephin
4 Sobic.007G007000 DUF250 domain containing protein, putative, expressed K15356: VRG4, GDP-mannose transporter
5 Sobic.003G404200 expressed protein -
6 Sobic.008G147700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein K14169: CTU2, cytoplasmic tRNA 2-thiolation protein 2
7 Sobic.003G436300 expressed protein -
8 Sobic.004G153400 OsFBK7 - F-box domain and kelch repeat containing protein, expressed -
9 Sobic.001G123000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
10 Sobic.008G128600 miro, putative, expressed K07953: GTP-binding protein SAR1
11 Sobic.004G127900 Leucine Rich Repeat family protein, expressed K10268: F-box and leucine-rich repeat protein 2/20
12 Sobic.003G116900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
13 Sobic.002G039000 ML domain protein, putative, expressed -
14 Sobic.003G344900 selT-like protein precursor, putative, expressed -
15 Sobic.004G348300 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
16 Sobic.004G337200 dehydrogenase, putative, expressed -
17 Sobic.006G004600 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
18 Sobic.009G143300 OsFBL22 - F-box domain and LRR containing protein, expressed K03875: SKP2, F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
19 Sobic.001G386200 Atypical Cys His rich thioredoxin 4 (Os)(PubMedID : 27208977)@thioredoxin, putative, expressed -
20 Sobic.007G186000 radical SAM enzyme, putative, expressed K01012: biotin synthase


Gene co-expression network
sample Sobic006G226100 Sobic006G226100 Sobic001G137300 Sobic001G137300 Sobic006G226100--Sobic001G137300 Sobic004G153501 Sobic004G153501 Sobic006G226100--Sobic004G153501 Sobic001G427200 Sobic001G427200 Sobic006G226100--Sobic001G427200 Sobic007G007000 Sobic007G007000 Sobic006G226100--Sobic007G007000 Sobic003G404200 Sobic003G404200 Sobic006G226100--Sobic003G404200 Sobic008G147700 Sobic008G147700 Sobic006G226100--Sobic008G147700 Sobic003G436300 Sobic003G436300 Sobic006G226100--Sobic003G436300 Sobic004G153400 Sobic004G153400 Sobic006G226100--Sobic004G153400 Sobic001G123000 Sobic001G123000 Sobic006G226100--Sobic001G123000 Sobic001G137300--Sobic007G007000 Sobic003G344900 Sobic003G344900 Sobic001G137300--Sobic003G344900 Sobic002G352600 Sobic002G352600 Sobic001G137300--Sobic002G352600 Sobic009G217100 Sobic009G217100 Sobic001G137300--Sobic009G217100 Sobic001G137100 Sobic001G137100 Sobic001G137300--Sobic001G137100 Sobic001G137300--Sobic006G226100 Sobic001G121200 Sobic001G121200 Sobic001G137300--Sobic001G121200 Sobic004G348300 Sobic004G348300 Sobic001G137300--Sobic004G348300 Sobic003G063000 Sobic003G063000 Sobic001G137300--Sobic003G063000 Sobic004G153501--Sobic004G153400 Sobic002G046800 Sobic002G046800 Sobic004G153501--Sobic002G046800 Sobic006G138400 Sobic006G138400 Sobic004G153501--Sobic006G138400 Sobic003G069500 Sobic003G069500 Sobic004G153501--Sobic003G069500 Sobic003G093300 Sobic003G093300 Sobic004G153501--Sobic003G093300 Sobic004G153501--Sobic001G123000 Sobic007G148200 Sobic007G148200 Sobic004G153501--Sobic007G148200 Sobic001G048766 Sobic001G048766 Sobic004G153501--Sobic001G048766 Sobic007G190333 Sobic007G190333 Sobic004G153501--Sobic007G190333 Sobic001G427200--Sobic003G436300 Sobic003G217400 Sobic003G217400 Sobic001G427200--Sobic003G217400 Sobic004G174100 Sobic004G174100 Sobic001G427200--Sobic004G174100 Sobic003G077900 Sobic003G077900 Sobic001G427200--Sobic003G077900 Sobic002G251700 Sobic002G251700 Sobic001G427200--Sobic002G251700 Sobic010G090900 Sobic010G090900 Sobic001G427200--Sobic010G090900 Sobic003G116900 Sobic003G116900 Sobic001G427200--Sobic003G116900 Sobic005G044800 Sobic005G044800 Sobic001G427200--Sobic005G044800 Sobic003G299000 Sobic003G299000 Sobic001G427200--Sobic003G299000 Sobic007G007000--Sobic009G217100 Sobic007G007000--Sobic001G123000 Sobic007G007000--Sobic001G137300 Sobic007G007000--Sobic002G251700 Sobic009G259400 Sobic009G259400 Sobic007G007000--Sobic009G259400 Sobic010G000900 Sobic010G000900 Sobic007G007000--Sobic010G000900 Sobic007G007000--Sobic002G352600 Sobic007G007000--Sobic001G121200 Sobic005G203800 Sobic005G203800 Sobic007G007000--Sobic005G203800 Sobic010G192800 Sobic010G192800 Sobic003G404200--Sobic010G192800 Sobic004G266400 Sobic004G266400 Sobic003G404200--Sobic004G266400 Sobic009G034700 Sobic009G034700 Sobic003G404200--Sobic009G034700 Sobic006G043600 Sobic006G043600 Sobic003G404200--Sobic006G043600 Sobic009G016600 Sobic009G016600 Sobic003G404200--Sobic009G016600 Sobic003G365000 Sobic003G365000 Sobic003G404200--Sobic003G365000 Sobic001G016700 Sobic001G016700 Sobic003G404200--Sobic001G016700 Sobic002G116800 Sobic002G116800 Sobic003G404200--Sobic002G116800 Sobic004G337200 Sobic004G337200 Sobic003G404200--Sobic004G337200 Sobic003G354400 Sobic003G354400 Sobic008G147700--Sobic003G354400 Sobic008G147700--Sobic003G436300 Sobic010G188400 Sobic010G188400 Sobic008G147700--Sobic010G188400 Sobic001G120300 Sobic001G120300 Sobic008G147700--Sobic001G120300 Sobic008G147700--Sobic005G203800 Sobic006G083600 Sobic006G083600 Sobic008G147700--Sobic006G083600 Sobic005G091600 Sobic005G091600 Sobic008G147700--Sobic005G091600 Sobic010G130200 Sobic010G130200 Sobic008G147700--Sobic010G130200 Sobic006G176600 Sobic006G176600 Sobic008G147700--Sobic006G176600 Sobic006G034000 Sobic006G034000 Sobic003G436300--Sobic006G034000 Sobic001G085100 Sobic001G085100 Sobic003G436300--Sobic001G085100 Sobic010G020300 Sobic010G020300 Sobic003G436300--Sobic010G020300 Sobic001G057800 Sobic001G057800 Sobic003G436300--Sobic001G057800 Sobic003G436300--Sobic003G116900 Sobic003G312200 Sobic003G312200 Sobic003G436300--Sobic003G312200 Sobic001G323000 Sobic001G323000 Sobic003G436300--Sobic001G323000 Sobic004G348900 Sobic004G348900 Sobic003G436300--Sobic004G348900 Sobic001G296900 Sobic001G296900 Sobic003G436300--Sobic001G296900 Sobic004G153400--Sobic004G153501 Sobic004G153400--Sobic002G046800 Sobic004G153400--Sobic003G093300 Sobic001G111500 Sobic001G111500 Sobic004G153400--Sobic001G111500 Sobic004G153400--Sobic001G123000 Sobic002G226000 Sobic002G226000 Sobic004G153400--Sobic002G226000 Sobic001G111366 Sobic001G111366 Sobic004G153400--Sobic001G111366 Sobic004G153400--Sobic007G148200 Sobic009G235900 Sobic009G235900 Sobic004G153400--Sobic009G235900 Sobic001G123000--Sobic007G007000 Sobic001G123000--Sobic009G259400 Sobic001G123000--Sobic003G344900 Sobic001G123000--Sobic001G120300 Sobic001G098200 Sobic001G098200 Sobic001G123000--Sobic001G098200 Sobic001G123000--Sobic010G090900 Sobic006G114500 Sobic006G114500 Sobic001G123000--Sobic006G114500 Sobic001G123000--Sobic005G091600 Sobic007G177000 Sobic007G177000 Sobic001G123000--Sobic007G177000
Octagon: transcription factors


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