Gene annotation
Transcriptome id Sobic.010G239700.1,Sobic.010G239700.3,Sobic.010G239700.2
Synonym CRK10, RLK4
Functional annotation cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (PubMedID : 28640841)
TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt A0A1W0VUJ9 , A0A1W0VUK1 , A0A194YM61
Pfam PF00069
Panther DB PTHR27002 PTHR27002:SF145
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G23180 : cysteine-rich RLK (RECEPTOR-like protein kinase) 10
RAP-DB (Rice) LOC_Os06g47530.1 : TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a041827
Brachypodium KQK17282 , KQK17281 , KQK17280 , KQK17279
Barley HORVU7Hr1G099320.8 , HORVU7Hr1G099320.12 , HORVU7Hr1G099320.9 , HORVU7Hr1G099320.6 , HORVU7Hr1G099320.7 , HORVU7Hr1G099320.4 , HORVU7Hr1G099320.5 , HORVU7Hr1G099320.2 , HORVU7Hr1G099320.3 , HORVU7Hr1G099320.1 , HORVU7Hr1G099390.16 , HORVU7Hr1G099390.15 , HORVU7Hr1G099390.14 , HORVU7Hr1G099390.13 , HORVU7Hr1G099390.12 , HORVU7Hr1G099390.11 , HORVU7Hr1G099390.10 , HORVU7Hr1G099320.14 , HORVU7Hr1G099320.15 , HORVU7Hr1G099320.16 , HORVU7Hr1G099320.17 , HORVU7Hr1G099320.10 , HORVU7Hr1G099320.11 , HORVU7Hr1G099320.13 , HORVU7Hr1G099320.18 , HORVU7Hr1G099390.7 , HORVU7Hr1G099390.6 , HORVU7Hr1G099390.5 , HORVU7Hr1G099390.4 , HORVU7Hr1G099390.3 , HORVU7Hr1G099390.2 , HORVU7Hr1G099390.1 , HORVU7Hr1G099390.9 , HORVU7Hr1G099390.8
Wheat TraesCS5D02G187700 , TraesCS1B02G238400 , TraesCS1B02G238400 , TraesCS5D02G187500 , TraesCS5D02G187500 , TraesCS7B02G333500 , TraesCS5D02G187700 , TraesCS7A02G433700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G049300 nitrate-induced NOI protein, expressed K13456: RPM1-interacting protein 4
2 Sobic.007G007000 DUF250 domain containing protein, putative, expressed K15356: VRG4, GDP-mannose transporter
3 Sobic.004G006200 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
4 Sobic.003G344900 selT-like protein precursor, putative, expressed -
5 Sobic.009G217100 phosphatidylinositol transfer, putative, expressed -
6 Sobic.001G137300 GATA zinc finger domain containing protein, expressed -
7 Sobic.001G123000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
8 Sobic.002G113100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@membrane associated DUF588 domain containing protein, putative, expressed -
9 Sobic.004G348300 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
10 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
11 Sobic.003G063000 expressed protein -
12 Sobic.001G253700 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
13 Sobic.002G424000 transcription factor, putative, expressed K14431: transcription factor TGA
14 Sobic.008G107500 WRKY96, expressed -
15 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
16 Sobic.009G028800 OsFBX115 - F-box domain containing protein, expressed -
17 Sobic.009G259400 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
18 Sobic.007G062600 mRNA cap guanine-N7 methyltransferase 1, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
19 Sobic.001G120300 phytanoyl-CoA dioxygenase, putative, expressed K00477: phytanoyl-CoA hydroxylase
20 Sobic.005G195200 expressed protein -


Gene co-expression network
sample Sobic010G239700 Sobic010G239700 Sobic006G049300 Sobic006G049300 Sobic010G239700--Sobic006G049300 Sobic007G007000 Sobic007G007000 Sobic010G239700--Sobic007G007000 Sobic004G006200 Sobic004G006200 Sobic010G239700--Sobic004G006200 Sobic003G344900 Sobic003G344900 Sobic010G239700--Sobic003G344900 Sobic009G217100 Sobic009G217100 Sobic010G239700--Sobic009G217100 Sobic001G137300 Sobic001G137300 Sobic010G239700--Sobic001G137300 Sobic001G123000 Sobic001G123000 Sobic010G239700--Sobic001G123000 Sobic002G113100 Sobic002G113100 Sobic010G239700--Sobic002G113100 Sobic004G348300 Sobic004G348300 Sobic010G239700--Sobic004G348300 Sobic003G354400 Sobic003G354400 Sobic006G049300--Sobic003G354400 Sobic006G049300--Sobic010G239700 Sobic006G049300--Sobic004G006200 Sobic006G049300--Sobic007G007000 Sobic004G183600 Sobic004G183600 Sobic006G049300--Sobic004G183600 Sobic006G049300--Sobic004G348300 Sobic006G049300--Sobic003G344900 Sobic006G049300--Sobic009G217100 Sobic004G167400 Sobic004G167400 Sobic006G049300--Sobic004G167400 Sobic007G007000--Sobic009G217100 Sobic007G007000--Sobic001G123000 Sobic007G007000--Sobic001G137300 Sobic002G251700 Sobic002G251700 Sobic007G007000--Sobic002G251700 Sobic009G259400 Sobic009G259400 Sobic007G007000--Sobic009G259400 Sobic010G000900 Sobic010G000900 Sobic007G007000--Sobic010G000900 Sobic002G352600 Sobic002G352600 Sobic007G007000--Sobic002G352600 Sobic001G121200 Sobic001G121200 Sobic007G007000--Sobic001G121200 Sobic005G203800 Sobic005G203800 Sobic007G007000--Sobic005G203800 Sobic002G132000 Sobic002G132000 Sobic004G006200--Sobic002G132000 Sobic004G295800 Sobic004G295800 Sobic004G006200--Sobic004G295800 Sobic007G024700 Sobic007G024700 Sobic004G006200--Sobic007G024700 Sobic007G062600 Sobic007G062600 Sobic004G006200--Sobic007G062600 Sobic004G052900 Sobic004G052900 Sobic004G006200--Sobic004G052900 Sobic004G264400 Sobic004G264400 Sobic004G006200--Sobic004G264400 Sobic002G424000 Sobic002G424000 Sobic004G006200--Sobic002G424000 Sobic001G199100 Sobic001G199100 Sobic004G006200--Sobic001G199100 Sobic003G012200 Sobic003G012200 Sobic004G006200--Sobic003G012200 Sobic003G344900--Sobic003G012200 Sobic003G344900--Sobic010G000900 Sobic003G344900--Sobic004G348300 Sobic003G344900--Sobic009G259400 Sobic005G044800 Sobic005G044800 Sobic003G344900--Sobic005G044800 Sobic003G344900--Sobic001G123000 Sobic001G047400 Sobic001G047400 Sobic003G344900--Sobic001G047400 Sobic001G181700 Sobic001G181700 Sobic003G344900--Sobic001G181700 Sobic001G051200 Sobic001G051200 Sobic003G344900--Sobic001G051200 Sobic009G217100--Sobic009G259400 Sobic009G217100--Sobic010G000900 Sobic009G217100--Sobic007G007000 Sobic009G217100--Sobic002G352600 Sobic002G226900 Sobic002G226900 Sobic009G217100--Sobic002G226900 Sobic009G217100--Sobic004G006200 Sobic009G217100--Sobic004G348300 Sobic001G137100 Sobic001G137100 Sobic009G217100--Sobic001G137100 Sobic010G251000 Sobic010G251000 Sobic009G217100--Sobic010G251000 Sobic001G137300--Sobic007G007000 Sobic001G137300--Sobic003G344900 Sobic001G137300--Sobic002G352600 Sobic001G137300--Sobic009G217100 Sobic001G137300--Sobic001G137100 Sobic006G226100 Sobic006G226100 Sobic001G137300--Sobic006G226100 Sobic001G137300--Sobic001G121200 Sobic001G137300--Sobic004G348300 Sobic003G063000 Sobic003G063000 Sobic001G137300--Sobic003G063000 Sobic001G123000--Sobic007G007000 Sobic001G123000--Sobic009G259400 Sobic001G123000--Sobic003G344900 Sobic001G120300 Sobic001G120300 Sobic001G123000--Sobic001G120300 Sobic001G098200 Sobic001G098200 Sobic001G123000--Sobic001G098200 Sobic010G090900 Sobic010G090900 Sobic001G123000--Sobic010G090900 Sobic006G114500 Sobic006G114500 Sobic001G123000--Sobic006G114500 Sobic005G091600 Sobic005G091600 Sobic001G123000--Sobic005G091600 Sobic007G177000 Sobic007G177000 Sobic001G123000--Sobic007G177000 Sobic003G442500 Sobic003G442500 Sobic002G113100--Sobic003G442500 Sobic005G086100 Sobic005G086100 Sobic002G113100--Sobic005G086100 Sobic003G061800 Sobic003G061800 Sobic002G113100--Sobic003G061800 Sobic002G113100--Sobic010G239700 Sobic009G210600 Sobic009G210600 Sobic002G113100--Sobic009G210600 Sobic002G087800 Sobic002G087800 Sobic002G113100--Sobic002G087800 Sobic002G113100--Sobic004G006200 Sobic002G113100--Sobic006G049300 Sobic004G225100 Sobic004G225100 Sobic002G113100--Sobic004G225100 Sobic004G348300--Sobic003G012200 Sobic004G348300--Sobic003G344900 Sobic004G348300--Sobic001G199100 Sobic004G348300--Sobic002G352600 Sobic006G249700 Sobic006G249700 Sobic004G348300--Sobic006G249700 Sobic004G348300--Sobic004G006200 Sobic002G059300 Sobic002G059300 Sobic004G348300--Sobic002G059300 Sobic004G348300--Sobic009G217100 Sobic005G004200 Sobic005G004200 Sobic004G348300--Sobic005G004200
Octagon: transcription factors


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