Gene annotation
Transcriptome id Sobic.007G207900.2,Sobic.007G207900.1
Synonym Sb07g027510
Functional annotation AT hook motif domain containing protein, expressed
UniProt A0A1B6PIV8
Pfam PF03479
Panther DB PTHR31500 PTHR31500:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33620 : AT hook motif DNA-binding family protein
RAP-DB (Rice) LOC_Os08g40150.2,LOC_Os08g40150.1 : AT hook motif domain containing protein, expressed
MaizeGDB (Corn) Zm00025a033817 , Zm00025a005125
Brachypodium KQJ90775 , PNT64840 , KQJ98952 , PNT64839
Barley HORVU7Hr1G051150.9 , HORVU7Hr1G051150.8 , HORVU7Hr1G051150.1 , HORVU7Hr1G051150.3 , HORVU7Hr1G051150.2 , HORVU7Hr1G051150.5 , HORVU7Hr1G051150.4 , HORVU7Hr1G051150.7 , HORVU7Hr1G051150.6 , HORVU7Hr1G051150.10
Wheat TraesCS7D02G247300 , TraesCS7B02G143000 , TraesCS7D02G247300 , TraesCS7A02G248500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G114500 per1-like family protein, putative, expressed -
2 Sobic.004G348300 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
3 Sobic.004G282400 rhoGAP domain containing protein, expressed -
4 Sobic.007G062600 mRNA cap guanine-N7 methyltransferase 1, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
5 Sobic.006G249700 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
6 Sobic.002G200100 AGAP000554-PA, putative, expressed -
7 Sobic.008G062000 expressed protein K11878: PSMG4, proteasome assembly chaperone 4
8 Sobic.004G006200 ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
9 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
10 Sobic.002G313500 protein kinase PKN/PRK1, effector, putative, expressed -
11 Sobic.001G137300 GATA zinc finger domain containing protein, expressed -
12 Sobic.009G157200 OsFBL23 - F-box domain and LRR containing protein, expressed K13463: coronatine-insensitive protein 1
13 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
14 Sobic.007G002200 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
15 Sobic.009G054700 macrophage erythroblast attacher, putative, expressed K18624: MAEA, macrophage erythroblast attacher
16 Sobic.001G142100 WD domain, G-beta repeat domain containing protein, expressed K04536: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
17 Sobic.004G350100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
18 Sobic.003G001100 Lg106, putative, expressed -
19 Sobic.005G004200 GIL1, putative, expressed -
20 Sobic.004G301900 potyvirus VPg interacting protein, putative, expressed -


Gene co-expression network
sample Sobic007G207900 Sobic007G207900 Sobic006G114500 Sobic006G114500 Sobic007G207900--Sobic006G114500 Sobic004G348300 Sobic004G348300 Sobic007G207900--Sobic004G348300 Sobic004G282400 Sobic004G282400 Sobic007G207900--Sobic004G282400 Sobic007G062600 Sobic007G062600 Sobic007G207900--Sobic007G062600 Sobic006G249700 Sobic006G249700 Sobic007G207900--Sobic006G249700 Sobic002G200100 Sobic002G200100 Sobic007G207900--Sobic002G200100 Sobic008G062000 Sobic008G062000 Sobic007G207900--Sobic008G062000 Sobic004G006200 Sobic004G006200 Sobic007G207900--Sobic004G006200 Sobic001G466700 Sobic001G466700 Sobic007G207900--Sobic001G466700 Sobic001G142100 Sobic001G142100 Sobic006G114500--Sobic001G142100 Sobic002G313500 Sobic002G313500 Sobic006G114500--Sobic002G313500 Sobic004G350100 Sobic004G350100 Sobic006G114500--Sobic004G350100 Sobic004G021100 Sobic004G021100 Sobic006G114500--Sobic004G021100 Sobic004G339100 Sobic004G339100 Sobic006G114500--Sobic004G339100 Sobic004G205600 Sobic004G205600 Sobic006G114500--Sobic004G205600 Sobic001G201400 Sobic001G201400 Sobic006G114500--Sobic001G201400 Sobic006G114500--Sobic001G466700 Sobic009G257800 Sobic009G257800 Sobic006G114500--Sobic009G257800 Sobic003G012200 Sobic003G012200 Sobic004G348300--Sobic003G012200 Sobic003G344900 Sobic003G344900 Sobic004G348300--Sobic003G344900 Sobic001G199100 Sobic001G199100 Sobic004G348300--Sobic001G199100 Sobic002G352600 Sobic002G352600 Sobic004G348300--Sobic002G352600 Sobic004G348300--Sobic006G249700 Sobic004G348300--Sobic004G006200 Sobic002G059300 Sobic002G059300 Sobic004G348300--Sobic002G059300 Sobic009G217100 Sobic009G217100 Sobic004G348300--Sobic009G217100 Sobic005G004200 Sobic005G004200 Sobic004G348300--Sobic005G004200 Sobic010G189000 Sobic010G189000 Sobic004G282400--Sobic010G189000 Sobic004G282400--Sobic004G350100 Sobic004G330900 Sobic004G330900 Sobic004G282400--Sobic004G330900 Sobic009G056800 Sobic009G056800 Sobic004G282400--Sobic009G056800 Sobic004G282400--Sobic004G205600 Sobic006G173100 Sobic006G173100 Sobic004G282400--Sobic006G173100 Sobic004G282400--Sobic006G114500 Sobic007G202600 Sobic007G202600 Sobic004G282400--Sobic007G202600 Sobic002G423200 Sobic002G423200 Sobic004G282400--Sobic002G423200 Sobic007G062600--Sobic004G006200 Sobic003G433100 Sobic003G433100 Sobic007G062600--Sobic003G433100 Sobic009G207000 Sobic009G207000 Sobic007G062600--Sobic009G207000 Sobic003G063000 Sobic003G063000 Sobic007G062600--Sobic003G063000 Sobic009G228700 Sobic009G228700 Sobic007G062600--Sobic009G228700 Sobic007G062600--Sobic006G249700 Sobic009G154800 Sobic009G154800 Sobic007G062600--Sobic009G154800 Sobic009G259400 Sobic009G259400 Sobic007G062600--Sobic009G259400 Sobic004G104900 Sobic004G104900 Sobic007G062600--Sobic004G104900 Sobic006G249700--Sobic009G228700 Sobic006G249700--Sobic009G207000 Sobic006G249700--Sobic004G348300 Sobic003G312200 Sobic003G312200 Sobic006G249700--Sobic003G312200 Sobic006G249700--Sobic002G352600 Sobic004G275700 Sobic004G275700 Sobic006G249700--Sobic004G275700 Sobic001G323000 Sobic001G323000 Sobic006G249700--Sobic001G323000 Sobic006G148200 Sobic006G148200 Sobic006G249700--Sobic006G148200 Sobic009G138100 Sobic009G138100 Sobic006G249700--Sobic009G138100 Sobic002G200100--Sobic006G173100 Sobic001G119300 Sobic001G119300 Sobic002G200100--Sobic001G119300 Sobic002G200100--Sobic004G021100 Sobic002G010300 Sobic002G010300 Sobic002G200100--Sobic002G010300 Sobic002G200100--Sobic004G350100 Sobic004G007300 Sobic004G007300 Sobic002G200100--Sobic004G007300 Sobic002G200100--Sobic004G205600 Sobic007G026300 Sobic007G026300 Sobic002G200100--Sobic007G026300 Sobic007G104800 Sobic007G104800 Sobic002G200100--Sobic007G104800 Sobic006G273200 Sobic006G273200 Sobic008G062000--Sobic006G273200 Sobic008G062000--Sobic004G205600 Sobic001G131800 Sobic001G131800 Sobic008G062000--Sobic001G131800 Sobic003G250500 Sobic003G250500 Sobic008G062000--Sobic003G250500 Sobic010G033400 Sobic010G033400 Sobic008G062000--Sobic010G033400 Sobic008G067600 Sobic008G067600 Sobic008G062000--Sobic008G067600 Sobic008G174300 Sobic008G174300 Sobic008G062000--Sobic008G174300 Sobic007G205800 Sobic007G205800 Sobic008G062000--Sobic007G205800 Sobic007G132400 Sobic007G132400 Sobic008G062000--Sobic007G132400 Sobic002G132000 Sobic002G132000 Sobic004G006200--Sobic002G132000 Sobic004G295800 Sobic004G295800 Sobic004G006200--Sobic004G295800 Sobic007G024700 Sobic007G024700 Sobic004G006200--Sobic007G024700 Sobic004G006200--Sobic007G062600 Sobic004G052900 Sobic004G052900 Sobic004G006200--Sobic004G052900 Sobic004G264400 Sobic004G264400 Sobic004G006200--Sobic004G264400 Sobic002G424000 Sobic002G424000 Sobic004G006200--Sobic002G424000 Sobic004G006200--Sobic001G199100 Sobic004G006200--Sobic003G012200 Sobic006G252700 Sobic006G252700 Sobic001G466700--Sobic006G252700 Sobic003G081000 Sobic003G081000 Sobic001G466700--Sobic003G081000 Sobic001G143500 Sobic001G143500 Sobic001G466700--Sobic001G143500 Sobic002G388200 Sobic002G388200 Sobic001G466700--Sobic002G388200 Sobic001G371200 Sobic001G371200 Sobic001G466700--Sobic001G371200 Sobic001G466700--Sobic004G021100 Sobic007G119200 Sobic007G119200 Sobic001G466700--Sobic007G119200 Sobic001G466700--Sobic009G056800 Sobic007G118200 Sobic007G118200 Sobic001G466700--Sobic007G118200
Octagon: transcription factors


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