Gene annotation
Transcriptome id Sobic.001G147000.1
Synonym lateral organ boundaries, LBD4, Sb01g012810, SbLBD2
Functional annotation "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA and BR treatments" (PubMedID : 20499123)
DUF260 domain containing protein, putative, expressed
UniProt C5WQF3
Pfam PF03195
Panther DB PTHR31301 PTHR31301:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30130 : Lateral organ boundaries (LOB) domain family protein
RAP-DB (Rice) LOC_Os03g45750.1 : DUF260 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a007545 , Zm00025a017194 , Zm00025a043472
Brachypodium KQK13888 , KQK14196 , KQK14197 , KQK14195 , KQK14198 , KQK14199 , PNT74441 , PNT74440 , PNT74443 , PNT74442 , PNT74444
Barley HORVU4Hr1G002480.1 , HORVU4Hr1G002480.2 , HORVU1Hr1G060290.4 , HORVU1Hr1G060290.1 , HORVU1Hr1G060290.2 , HORVU1Hr1G060290.3
Wheat TraesCS1B02G235700 , TraesCS4B02G016200 , TraesCS4A02G297500 , TraesCS1D02G224000 , TraesCS4D02G014600 , TraesCS1A02G222300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G236400 expressed protein -
2 Sobic.003G378900 protein kinase family protein, putative, expressed -
3 Sobic.004G247300 cysteine-rich repeat secretory protein precursor, putative, expressed -
4 Sobic.009G246100 X8 domain containing protein, expressed -
5 Sobic.001G522700 no apical meristem protein, putative, expressed -
6 Sobic.001G194000 DEFL6 - Defensin and Defensin-like DEFL family, expressed -
7 Sobic.008G035900 calmodulin-binding protein, putative, expressed -
8 Sobic.001G250100 thaumatin, putative, expressed -
9 Sobic.006G160900 NAC domain containing protein, putative, expressed -
10 Sobic.003G115200 expressed protein -
11 Sobic.001G328800 expressed protein -
12 Sobic.010G014400 - -
13 Sobic.008G134300 protein kinase domain containing protein, expressed -
14 Sobic.001G348900 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
15 Sobic.001G258600 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.010G003700 scarecrow, putative, expressed -
17 Sobic.001G156500 AGC_PVPK_like_kin82y.9 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
18 Sobic.004G262200 DNA binding protein, putative, expressed -
19 Sobic.008G143000 expressed protein -
20 Sobic.003G371750 - -


Gene co-expression network
sample Sobic001G147000 Sobic001G147000 Sobic003G236400 Sobic003G236400 Sobic001G147000--Sobic003G236400 Sobic003G378900 Sobic003G378900 Sobic001G147000--Sobic003G378900 Sobic004G247300 Sobic004G247300 Sobic001G147000--Sobic004G247300 Sobic009G246100 Sobic009G246100 Sobic001G147000--Sobic009G246100 Sobic001G522700 Sobic001G522700 Sobic001G147000--Sobic001G522700 Sobic001G194000 Sobic001G194000 Sobic001G147000--Sobic001G194000 Sobic008G035900 Sobic008G035900 Sobic001G147000--Sobic008G035900 Sobic001G250100 Sobic001G250100 Sobic001G147000--Sobic001G250100 Sobic006G160900 Sobic006G160900 Sobic001G147000--Sobic006G160900 Sobic003G228700 Sobic003G228700 Sobic003G236400--Sobic003G228700 Sobic001G163800 Sobic001G163800 Sobic003G236400--Sobic001G163800 Sobic003G236400--Sobic001G250100 Sobic009G174300 Sobic009G174300 Sobic003G236400--Sobic009G174300 Sobic005G177400 Sobic005G177400 Sobic003G236400--Sobic005G177400 Sobic002G311501 Sobic002G311501 Sobic003G236400--Sobic002G311501 Sobic007G159600 Sobic007G159600 Sobic003G236400--Sobic007G159600 Sobic002G365550 Sobic002G365550 Sobic003G236400--Sobic002G365550 Sobic002G357800 Sobic002G357800 Sobic003G236400--Sobic002G357800 Sobic001G506500 Sobic001G506500 Sobic003G378900--Sobic001G506500 Sobic010G082100 Sobic010G082100 Sobic003G378900--Sobic010G082100 Sobic003G240500 Sobic003G240500 Sobic003G378900--Sobic003G240500 Sobic003G378900--Sobic001G147000 Sobic001G160500 Sobic001G160500 Sobic003G378900--Sobic001G160500 Sobic002G281100 Sobic002G281100 Sobic003G378900--Sobic002G281100 Sobic001G277600 Sobic001G277600 Sobic003G378900--Sobic001G277600 Sobic003G378900--Sobic003G236400 Sobic002G334200 Sobic002G334200 Sobic003G378900--Sobic002G334200 Sobic005G054700 Sobic005G054700 Sobic004G247300--Sobic005G054700 Sobic001G514400 Sobic001G514400 Sobic004G247300--Sobic001G514400 Sobic009G175200 Sobic009G175200 Sobic004G247300--Sobic009G175200 Sobic002G034301 Sobic002G034301 Sobic004G247300--Sobic002G034301 Sobic001G215900 Sobic001G215900 Sobic004G247300--Sobic001G215900 Sobic009G099700 Sobic009G099700 Sobic004G247300--Sobic009G099700 Sobic001G366800 Sobic001G366800 Sobic004G247300--Sobic001G366800 Sobic010G242900 Sobic010G242900 Sobic004G247300--Sobic010G242900 Sobic006G213100 Sobic006G213100 Sobic004G247300--Sobic006G213100 Sobic009G246100--Sobic001G163800 Sobic010G045400 Sobic010G045400 Sobic009G246100--Sobic010G045400 Sobic009G246100--Sobic005G177400 Sobic005G022500 Sobic005G022500 Sobic009G246100--Sobic005G022500 Sobic003G368000 Sobic003G368000 Sobic009G246100--Sobic003G368000 Sobic003G017601 Sobic003G017601 Sobic009G246100--Sobic003G017601 Sobic001G503000 Sobic001G503000 Sobic009G246100--Sobic001G503000 Sobic005G131301 Sobic005G131301 Sobic009G246100--Sobic005G131301 Sobic005G018200 Sobic005G018200 Sobic009G246100--Sobic005G018200 Sobic001G455100 Sobic001G455100 Sobic001G522700--Sobic001G455100 Sobic008G135300 Sobic008G135300 Sobic001G522700--Sobic008G135300 Sobic009G221500 Sobic009G221500 Sobic001G522700--Sobic009G221500 Sobic007G154200 Sobic007G154200 Sobic001G522700--Sobic007G154200 Sobic010G152400 Sobic010G152400 Sobic001G522700--Sobic010G152400 Sobic010G138300 Sobic010G138300 Sobic001G522700--Sobic010G138300 Sobic008G019800 Sobic008G019800 Sobic001G522700--Sobic008G019800 Sobic010G148800 Sobic010G148800 Sobic001G522700--Sobic010G148800 Sobic006G201000 Sobic006G201000 Sobic001G522700--Sobic006G201000 Sobic003G397300 Sobic003G397300 Sobic001G194000--Sobic003G397300 Sobic001G194000--Sobic006G213100 Sobic001G082300 Sobic001G082300 Sobic001G194000--Sobic001G082300 Sobic001G069800 Sobic001G069800 Sobic001G194000--Sobic001G069800 Sobic006G241300 Sobic006G241300 Sobic001G194000--Sobic006G241300 Sobic004G318600 Sobic004G318600 Sobic001G194000--Sobic004G318600 Sobic008G036900 Sobic008G036900 Sobic001G194000--Sobic008G036900 Sobic001G258600 Sobic001G258600 Sobic001G194000--Sobic001G258600 Sobic008G136000 Sobic008G136000 Sobic001G194000--Sobic008G136000 Sobic003G003700 Sobic003G003700 Sobic008G035900--Sobic003G003700 Sobic007G009000 Sobic007G009000 Sobic008G035900--Sobic007G009000 Sobic008G035900--Sobic002G357800 Sobic004G287800 Sobic004G287800 Sobic008G035900--Sobic004G287800 Sobic003G247600 Sobic003G247600 Sobic008G035900--Sobic003G247600 Sobic008G157000 Sobic008G157000 Sobic008G035900--Sobic008G157000 Sobic001G528600 Sobic001G528600 Sobic008G035900--Sobic001G528600 Sobic001G107200 Sobic001G107200 Sobic008G035900--Sobic001G107200 Sobic004G331200 Sobic004G331200 Sobic008G035900--Sobic004G331200 Sobic001G059600 Sobic001G059600 Sobic001G250100--Sobic001G059600 Sobic001G250100--Sobic006G160900 Sobic001G471800 Sobic001G471800 Sobic001G250100--Sobic001G471800 Sobic009G008800 Sobic009G008800 Sobic001G250100--Sobic009G008800 Sobic002G030800 Sobic002G030800 Sobic001G250100--Sobic002G030800 Sobic010G014400 Sobic010G014400 Sobic001G250100--Sobic010G014400 Sobic003G183300 Sobic003G183300 Sobic001G250100--Sobic003G183300 Sobic001G250100--Sobic001G163800 Sobic004G193500 Sobic004G193500 Sobic001G250100--Sobic004G193500 Sobic006G160900--Sobic009G008800 Sobic006G160900--Sobic001G250100 Sobic003G082700 Sobic003G082700 Sobic006G160900--Sobic003G082700 Sobic010G155800 Sobic010G155800 Sobic006G160900--Sobic010G155800 Sobic001G484000 Sobic001G484000 Sobic006G160900--Sobic001G484000 Sobic005G127200 Sobic005G127200 Sobic006G160900--Sobic005G127200 Sobic006G160900--Sobic001G471800 Sobic010G093300 Sobic010G093300 Sobic006G160900--Sobic010G093300 Sobic003G352700 Sobic003G352700 Sobic006G160900--Sobic003G352700
Octagon: transcription factors


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