Gene annotation
Transcriptome id Sobic.003G378900.1
Synonym Sb03g041850
Functional annotation protein kinase family protein, putative, expressed
UniProt C5XRF7
Pfam PF00069
Panther DB PTHR27006 PTHR27006:SF26
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G11050 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os01g66020.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a033734 , Zm00025a049633 , Zm00025a023547 , Zm00025a001429 , Zm00025a023843 , Zm00025a014170 , Zm00025a025630 , Zm00025a043048 , Zm00025a037383 , Zm00025a019005 , Zm00025a008603 , Zm00025a035581 , Zm00025a039496 , Zm00025a025101 , Zm00025a047387
Brachypodium KQK00546 , KQJ86265 , KQK06173 , PNT73321 , KQJ85665 , KQJ95505 , PNT73226
Barley HORVU3Hr1G090990.8 , HORVU3Hr1G090990.9 , HORVU3Hr1G090990.2 , HORVU3Hr1G090990.3 , HORVU3Hr1G090990.6 , HORVU3Hr1G090990.7 , HORVU3Hr1G090990.4 , HORVU3Hr1G090990.5 , HORVU1Hr1G004690.7 , HORVU1Hr1G004690.4 , HORVU1Hr1G004690.3 , HORVU1Hr1G004690.1 , HORVU1Hr1G004690.11 , HORVU1Hr1G004590.9 , HORVU1Hr1G004590.8 , HORVU1Hr1G004590.1 , HORVU1Hr1G004590.3 , HORVU1Hr1G004590.2 , HORVU1Hr1G004590.5 , HORVU1Hr1G004590.4 , HORVU1Hr1G004590.7 , HORVU1Hr1G004590.6 , HORVU1Hr1G004590.10 , HORVU7Hr1G048140.2 , HORVU7Hr1G048140.3 , HORVU1Hr1G088440.1 , HORVU5Hr1G021940.5 , HORVU5Hr1G021940.4 , HORVU3Hr1G017020.19 , HORVU3Hr1G017020.18 , HORVU3Hr1G017020.17 , HORVU3Hr1G017020.14 , HORVU3Hr1G017020.13 , HORVU3Hr1G017020.12 , HORVU3Hr1G017020.11 , HORVU3Hr1G017020.10 , HORVU3Hr1G017020.31 , HORVU3Hr1G017020.33 , HORVU3Hr1G017020.32 , HORVU3Hr1G017020.34 , HORVU3Hr1G017020.30 , HORVU4Hr1G015710.2 , HORVU4Hr1G015710.3 , HORVU4Hr1G015710.4 , HORVU4Hr1G015710.5 , HORVU6Hr1G058280.4 , HORVU6Hr1G058280.1 , HORVU5Hr1G001920.3 , HORVU5Hr1G001920.2 , HORVU5Hr1G001920.1 , HORVU5Hr1G107330.2 , HORVU5Hr1G107330.1 , HORVU7Hr1G048140.5 , HORVU7Hr1G048140.4 , HORVU1Hr1G088440.2 , HORVU2Hr1G020420.2 , HORVU2Hr1G020420.3 , HORVU2Hr1G020420.4 , HORVU5Hr1G021940.1 , HORVU5Hr1G021940.7 , HORVU5Hr1G021940.6 , HORVU3Hr1G017020.26 , HORVU3Hr1G017020.27 , HORVU3Hr1G017020.25 , HORVU3Hr1G017020.20 , HORVU3Hr1G017020.28 , HORVU3Hr1G017020.29 , HORVU3Hr1G017020.7 , HORVU3Hr1G017020.6 , HORVU3Hr1G017020.5 , HORVU3Hr1G017020.4 , HORVU3Hr1G017020.3 , HORVU3Hr1G017020.2 , HORVU3Hr1G017020.9
Wheat TraesCS2B02G138400 , TraesCS1A02G031200 , TraesCS1D02G032600 , TraesCS1D02G452700 , TraesCS3D02G095200 , TraesCS1B02G430500 , TraesCS1B02G038800 , TraesCS4A02G224800 , TraesCS1D02G409300 , TraesCS6D02G027700 , TraesCS1B02G479300 , TraesCS1B02G479300 , TraesCS5A02G084200 , TraesCS5D02G096200 , TraesCS1A02G444500 , TraesCS5B02G089800 , TraesCS2A02G118300 , TraesCS2D02G116700 , TraesCS4D02G088400 , TraesCS6B02G033300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G506500 exostosin family domain containing protein, expressed -
2 Sobic.010G082100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
3 Sobic.003G240500 glycosyl transferase, group 1 domain containing protein, expressed -
4 Sobic.001G147000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
5 Sobic.001G160500 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
6 Sobic.002G281100 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.001G277600 TKL_IRAK_DUF26-la.5 - DUF26 kinases have homology to DUF26 containing loci, expressed -
8 Sobic.003G236400 expressed protein -
9 Sobic.002G334200 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
10 Sobic.009G240100 receptor-like protein kinase homolog RK20-1, putative, expressed -
11 Sobic.009G150600 expressed protein -
12 Sobic.007G007300 methyltransferase domain containing protein, expressed -
13 Sobic.001G531300 glycosyl hydrolases family 16 protein, protein, expressed -
14 Sobic.001G526500 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
15 Sobic.005G048400 NBS-LRR disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
16 Sobic.003G176300 - -
17 Sobic.009G098000 expressed protein -
18 Sobic.001G499701 - -
19 Sobic.006G133200 expressed protein -
20 Sobic.002G373700 expressed protein -


Gene co-expression network
sample Sobic003G378900 Sobic003G378900 Sobic001G506500 Sobic001G506500 Sobic003G378900--Sobic001G506500 Sobic010G082100 Sobic010G082100 Sobic003G378900--Sobic010G082100 Sobic003G240500 Sobic003G240500 Sobic003G378900--Sobic003G240500 Sobic001G147000 Sobic001G147000 Sobic003G378900--Sobic001G147000 Sobic001G160500 Sobic001G160500 Sobic003G378900--Sobic001G160500 Sobic002G281100 Sobic002G281100 Sobic003G378900--Sobic002G281100 Sobic001G277600 Sobic001G277600 Sobic003G378900--Sobic001G277600 Sobic003G236400 Sobic003G236400 Sobic003G378900--Sobic003G236400 Sobic002G334200 Sobic002G334200 Sobic003G378900--Sobic002G334200 Sobic001G506500--Sobic010G082100 Sobic001G506500--Sobic003G240500 Sobic005G048400 Sobic005G048400 Sobic001G506500--Sobic005G048400 Sobic003G176300 Sobic003G176300 Sobic001G506500--Sobic003G176300 Sobic007G007300 Sobic007G007300 Sobic001G506500--Sobic007G007300 Sobic004G308500 Sobic004G308500 Sobic001G506500--Sobic004G308500 Sobic001G070100 Sobic001G070100 Sobic001G506500--Sobic001G070100 Sobic001G526500 Sobic001G526500 Sobic001G506500--Sobic001G526500 Sobic007G149000 Sobic007G149000 Sobic001G506500--Sobic007G149000 Sobic010G082100--Sobic003G240500 Sobic010G082100--Sobic001G506500 Sobic010G082100--Sobic007G007300 Sobic005G110514 Sobic005G110514 Sobic010G082100--Sobic005G110514 Sobic009G106100 Sobic009G106100 Sobic010G082100--Sobic009G106100 Sobic006G266800 Sobic006G266800 Sobic010G082100--Sobic006G266800 Sobic010G082100--Sobic004G308500 Sobic001G274400 Sobic001G274400 Sobic010G082100--Sobic001G274400 Sobic010G170150 Sobic010G170150 Sobic010G082100--Sobic010G170150 Sobic003G240500--Sobic010G082100 Sobic003G240500--Sobic007G007300 Sobic003G240500--Sobic006G266800 Sobic003G240500--Sobic005G110514 Sobic003G240500--Sobic004G308500 Sobic004G322000 Sobic004G322000 Sobic003G240500--Sobic004G322000 Sobic003G240500--Sobic001G506500 Sobic002G166150 Sobic002G166150 Sobic003G240500--Sobic002G166150 Sobic001G506700 Sobic001G506700 Sobic003G240500--Sobic001G506700 Sobic001G147000--Sobic003G236400 Sobic001G147000--Sobic003G378900 Sobic004G247300 Sobic004G247300 Sobic001G147000--Sobic004G247300 Sobic009G246100 Sobic009G246100 Sobic001G147000--Sobic009G246100 Sobic001G522700 Sobic001G522700 Sobic001G147000--Sobic001G522700 Sobic001G194000 Sobic001G194000 Sobic001G147000--Sobic001G194000 Sobic008G035900 Sobic008G035900 Sobic001G147000--Sobic008G035900 Sobic001G250100 Sobic001G250100 Sobic001G147000--Sobic001G250100 Sobic006G160900 Sobic006G160900 Sobic001G147000--Sobic006G160900 Sobic001G160500--Sobic001G277600 Sobic004G148400 Sobic004G148400 Sobic001G160500--Sobic004G148400 Sobic001G160500--Sobic001G506500 Sobic001G160500--Sobic005G048400 Sobic001G076300 Sobic001G076300 Sobic001G160500--Sobic001G076300 Sobic001G499701 Sobic001G499701 Sobic001G160500--Sobic001G499701 Sobic002G063566 Sobic002G063566 Sobic001G160500--Sobic002G063566 Sobic002G273400 Sobic002G273400 Sobic001G160500--Sobic002G273400 Sobic009G098000 Sobic009G098000 Sobic001G160500--Sobic009G098000 Sobic006G250400 Sobic006G250400 Sobic002G281100--Sobic006G250400 Sobic002G281100--Sobic001G277600 Sobic002G281100--Sobic002G334200 Sobic002G356500 Sobic002G356500 Sobic002G281100--Sobic002G356500 Sobic009G100100 Sobic009G100100 Sobic002G281100--Sobic009G100100 Sobic008G137300 Sobic008G137300 Sobic002G281100--Sobic008G137300 Sobic010G130400 Sobic010G130400 Sobic002G281100--Sobic010G130400 Sobic002G281100--Sobic001G499701 Sobic002G281100--Sobic003G240500 Sobic001G277600--Sobic005G110514 Sobic001G277600--Sobic005G048400 Sobic001G277600--Sobic003G240500 Sobic010G241700 Sobic010G241700 Sobic001G277600--Sobic010G241700 Sobic001G326400 Sobic001G326400 Sobic001G277600--Sobic001G326400 Sobic001G277600--Sobic004G308500 Sobic006G133200 Sobic006G133200 Sobic001G277600--Sobic006G133200 Sobic004G003100 Sobic004G003100 Sobic001G277600--Sobic004G003100 Sobic001G277600--Sobic001G506500 Sobic003G228700 Sobic003G228700 Sobic003G236400--Sobic003G228700 Sobic001G163800 Sobic001G163800 Sobic003G236400--Sobic001G163800 Sobic003G236400--Sobic001G250100 Sobic009G174300 Sobic009G174300 Sobic003G236400--Sobic009G174300 Sobic005G177400 Sobic005G177400 Sobic003G236400--Sobic005G177400 Sobic002G311501 Sobic002G311501 Sobic003G236400--Sobic002G311501 Sobic007G159600 Sobic007G159600 Sobic003G236400--Sobic007G159600 Sobic002G365550 Sobic002G365550 Sobic003G236400--Sobic002G365550 Sobic002G357800 Sobic002G357800 Sobic003G236400--Sobic002G357800 Sobic001G187300 Sobic001G187300 Sobic002G334200--Sobic001G187300 Sobic001G507100 Sobic001G507100 Sobic002G334200--Sobic001G507100 Sobic002G080200 Sobic002G080200 Sobic002G334200--Sobic002G080200 Sobic002G028632 Sobic002G028632 Sobic002G334200--Sobic002G028632 Sobic003G280000 Sobic003G280000 Sobic002G334200--Sobic003G280000 Sobic003G390500 Sobic003G390500 Sobic002G334200--Sobic003G390500 Sobic004G029300 Sobic004G029300 Sobic002G334200--Sobic004G029300 Sobic001G014700 Sobic001G014700 Sobic002G334200--Sobic001G014700 Sobic001G259100 Sobic001G259100 Sobic002G334200--Sobic001G259100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.