Gene annotation
Transcriptome id Sobic.001G152280.1
Synonym -
Functional annotation -
UniProt A0A1Z5S614
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G220300 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
2 Sobic.009G042700 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
3 Sobic.010G053800 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
4 Sobic.010G101800 dynamin, putative, expressed K01528: dynamin 1/3
5 Sobic.007G207000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL15 - SBP-box gene family member, expressed -
6 Sobic.003G278500 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
7 Sobic.007G186900 PP2A regulatory subunit TAP46, putative, expressed -
8 Sobic.002G315200 DNA-binding bromodomain-containing protein, putative, expressed -
9 Sobic.001G155000 DNA-directed RNA polymerase II subunit RPB2, putative, expressed K03010: RPB2, DNA-directed RNA polymerase II subunit RPB2
10 Sobic.001G043100 EMB1745, putative, expressed K18723: nucleoporin GLE1
11 Sobic.004G358400 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
12 Sobic.004G351100 signal peptide peptidase-like 2B, putative, expressed K09597: signal peptide peptidase-like 2B
13 Sobic.001G109800 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
14 Sobic.010G097600 OsLIM - LIM domain protein, putative actin-binding protein and transcription factor, expressed -
15 Sobic.001G451400 HEAT repeat family protein, putative, expressed K15305: VAC14, vacuole morphology and inheritance protein 14
16 Sobic.004G004300 expressed protein -
17 Sobic.002G297200 ZOS9-19 - C2H2 zinc finger protein, expressed -
18 Sobic.005G026200 HEAT repeat family protein, putative, expressed K11886: proteasome component ECM29
19 Sobic.007G217000 tetratricopeptide repeat domain containing protein, expressed K13342: PEX5, peroxin-5
20 Sobic.010G118950 - -


Gene co-expression network
sample Sobic001G152280 Sobic001G152280 Sobic001G220300 Sobic001G220300 Sobic001G152280--Sobic001G220300 Sobic009G042700 Sobic009G042700 Sobic001G152280--Sobic009G042700 Sobic010G053800 Sobic010G053800 Sobic001G152280--Sobic010G053800 Sobic010G101800 Sobic010G101800 Sobic001G152280--Sobic010G101800 Sobic007G207000 Sobic007G207000 Sobic001G152280--Sobic007G207000 Sobic003G278500 Sobic003G278500 Sobic001G152280--Sobic003G278500 Sobic007G186900 Sobic007G186900 Sobic001G152280--Sobic007G186900 Sobic002G315200 Sobic002G315200 Sobic001G152280--Sobic002G315200 Sobic001G155000 Sobic001G155000 Sobic001G152280--Sobic001G155000 Sobic004G146500 Sobic004G146500 Sobic001G220300--Sobic004G146500 Sobic008G047800 Sobic008G047800 Sobic001G220300--Sobic008G047800 Sobic001G220300--Sobic002G315200 Sobic001G220300--Sobic010G101800 Sobic001G109800 Sobic001G109800 Sobic001G220300--Sobic001G109800 Sobic009G191000 Sobic009G191000 Sobic001G220300--Sobic009G191000 Sobic004G065100 Sobic004G065100 Sobic001G220300--Sobic004G065100 Sobic004G274200 Sobic004G274200 Sobic001G220300--Sobic004G274200 Sobic002G297200 Sobic002G297200 Sobic001G220300--Sobic002G297200 Sobic009G042700--Sobic010G053800 Sobic004G002400 Sobic004G002400 Sobic009G042700--Sobic004G002400 Sobic009G219000 Sobic009G219000 Sobic009G042700--Sobic009G219000 Sobic001G466700 Sobic001G466700 Sobic009G042700--Sobic001G466700 Sobic004G004300 Sobic004G004300 Sobic009G042700--Sobic004G004300 Sobic009G042700--Sobic001G152280 Sobic001G281100 Sobic001G281100 Sobic009G042700--Sobic001G281100 Sobic009G042700--Sobic001G220300 Sobic006G052500 Sobic006G052500 Sobic009G042700--Sobic006G052500 Sobic006G012500 Sobic006G012500 Sobic010G053800--Sobic006G012500 Sobic010G275500 Sobic010G275500 Sobic010G053800--Sobic010G275500 Sobic004G072100 Sobic004G072100 Sobic010G053800--Sobic004G072100 Sobic010G053800--Sobic001G155000 Sobic003G187500 Sobic003G187500 Sobic010G053800--Sobic003G187500 Sobic010G053800--Sobic008G047800 Sobic010G116600 Sobic010G116600 Sobic010G053800--Sobic010G116600 Sobic006G163800 Sobic006G163800 Sobic010G053800--Sobic006G163800 Sobic004G039600 Sobic004G039600 Sobic010G053800--Sobic004G039600 Sobic010G101800--Sobic002G297200 Sobic010G101800--Sobic001G155000 Sobic007G167500 Sobic007G167500 Sobic010G101800--Sobic007G167500 Sobic010G028800 Sobic010G028800 Sobic010G101800--Sobic010G028800 Sobic003G397800 Sobic003G397800 Sobic010G101800--Sobic003G397800 Sobic001G409600 Sobic001G409600 Sobic010G101800--Sobic001G409600 Sobic002G310200 Sobic002G310200 Sobic010G101800--Sobic002G310200 Sobic010G101800--Sobic010G053800 Sobic002G309600 Sobic002G309600 Sobic010G101800--Sobic002G309600 Sobic001G125200 Sobic001G125200 Sobic007G207000--Sobic001G125200 Sobic001G474600 Sobic001G474600 Sobic007G207000--Sobic001G474600 Sobic003G101400 Sobic003G101400 Sobic007G207000--Sobic003G101400 Sobic007G207000--Sobic009G191000 Sobic001G196500 Sobic001G196500 Sobic007G207000--Sobic001G196500 Sobic001G540400 Sobic001G540400 Sobic007G207000--Sobic001G540400 Sobic004G351100 Sobic004G351100 Sobic007G207000--Sobic004G351100 Sobic007G207000--Sobic002G309600 Sobic001G050200 Sobic001G050200 Sobic007G207000--Sobic001G050200 Sobic003G278500--Sobic007G186900 Sobic003G029700 Sobic003G029700 Sobic003G278500--Sobic003G029700 Sobic003G278500--Sobic010G101800 Sobic003G278500--Sobic003G397800 Sobic003G278500--Sobic001G152280 Sobic007G217000 Sobic007G217000 Sobic003G278500--Sobic007G217000 Sobic003G278500--Sobic007G167500 Sobic003G056100 Sobic003G056100 Sobic003G278500--Sobic003G056100 Sobic010G097600 Sobic010G097600 Sobic003G278500--Sobic010G097600 Sobic007G186900--Sobic010G028800 Sobic006G142775 Sobic006G142775 Sobic007G186900--Sobic006G142775 Sobic010G056000 Sobic010G056000 Sobic007G186900--Sobic010G056000 Sobic007G186900--Sobic003G278500 Sobic007G186900--Sobic010G101800 Sobic001G191600 Sobic001G191600 Sobic007G186900--Sobic001G191600 Sobic001G451400 Sobic001G451400 Sobic007G186900--Sobic001G451400 Sobic007G186900--Sobic003G029700 Sobic001G205200 Sobic001G205200 Sobic007G186900--Sobic001G205200 Sobic010G153700 Sobic010G153700 Sobic002G315200--Sobic010G153700 Sobic002G006900 Sobic002G006900 Sobic002G315200--Sobic002G006900 Sobic001G071400 Sobic001G071400 Sobic002G315200--Sobic001G071400 Sobic002G315200--Sobic008G047800 Sobic002G315200--Sobic001G220300 Sobic001G512700 Sobic001G512700 Sobic002G315200--Sobic001G512700 Sobic002G315200--Sobic009G191000 Sobic001G290100 Sobic001G290100 Sobic002G315200--Sobic001G290100 Sobic001G497300 Sobic001G497300 Sobic002G315200--Sobic001G497300 Sobic001G155000--Sobic008G047800 Sobic001G155000--Sobic002G006900 Sobic003G200200 Sobic003G200200 Sobic001G155000--Sobic003G200200 Sobic009G040600 Sobic009G040600 Sobic001G155000--Sobic009G040600 Sobic001G222500 Sobic001G222500 Sobic001G155000--Sobic001G222500 Sobic007G011300 Sobic007G011300 Sobic001G155000--Sobic007G011300 Sobic008G153000 Sobic008G153000 Sobic001G155000--Sobic008G153000 Sobic001G155000--Sobic010G053800 Sobic001G155000--Sobic007G217000
Octagon: transcription factors


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