Gene annotation
Transcriptome id Sobic.001G179300.1
Synonym Sb01g015610, DNA binding with One Finger, SbDof5
Functional annotation Homologous to Dof genes in Arabidopsis and rice. (PubMedID : 21161392)
dof zinc finger domain containing protein, putative, expressed
UniProt R4N7V7 , C5WU64
Pfam PF02701
Panther DB PTHR31992 PTHR31992:SF34
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G65590 : Dof-type zinc finger DNA-binding family protein
RAP-DB (Rice) LOC_Os03g38870.1 : dof zinc finger domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a049197 , Zm00025a025405 , Zm00025a004485 , Zm00025a016425 , Zm00025a009285 , Zm00025a047370 , Zm00025a017356 , Zm00025a004247 , Zm00025a007115 , Zm00025a032602 , Zm00025a007401 , Zm00025a023031 , Zm00025a052752 , Zm00025a006464 , Zm00025a039572 , Zm00025a016727 , Zm00025a014147 , Zm00025a021740 , Zm00025a021884 , Zm00025a001854 , Zm00025a000851 , Zm00025a017302 , Zm00025a032473 , Zm00025a057389 , Zm00025a014756 , Zm00025a008288 , Zm00025a004967 , Zm00025a048181 , Zm00025a026723 , Zm00025a043793
Brachypodium KQK22335 , KQK14158 , PNT73247 , PNT69224 , KQK00955 , KQK16070 , KQK13036 , PNT65625 , PNT65624 , KQJ98766 , PNT69485 , KQJ90639 , KQK09823 , KQK03138 , KQJ97295 , KQK06036 , KQK14319 , KQK23432 , KQK00737 , KQJ84092 , KQK00738
Barley HORVU6Hr1G065250.4 , HORVU6Hr1G065250.5 , HORVU6Hr1G065250.6 , HORVU6Hr1G065250.7 , HORVU2Hr1G119110.7 , HORVU5Hr1G048700.1 , HORVU6Hr1G065250.2 , HORVU6Hr1G065250.3 , HORVU2Hr1G119110.9 , HORVU2Hr1G119110.8 , HORVU6Hr1G065250.8 , HORVU6Hr1G065250.9 , HORVU2Hr1G119110.3 , HORVU2Hr1G013060.1 , HORVU5Hr1G097600.1 , HORVU6Hr1G065250.1 , HORVU2Hr1G119110.6 , HORVU2Hr1G119110.5 , HORVU6Hr1G065250.10 , HORVU2Hr1G119160.6 , HORVU2Hr1G119160.4 , HORVU2Hr1G119160.2 , HORVU2Hr1G119160.3 , HORVU2Hr1G119160.1 , HORVU5Hr1G097620.1 , HORVU7Hr1G043250.2 , HORVU1Hr1G044560.1 , HORVU4Hr1G074990.3 , HORVU4Hr1G074990.2 , HORVU4Hr1G074990.1 , HORVU2Hr1G119110.4 , HORVU1Hr1G074140.1 , HORVU3Hr1G083460.1 , HORVU4Hr1G013890.1
Wheat TraesCS5B02G154100 , TraesCS2A02G402200 , TraesCS2D02G563000 , TraesCS4A02G097800 , TraesCS5A02G155900 , TraesCS4B02G286400 , TraesCS2D02G563400 , TraesCS6D02G236700 , TraesCS2D02G563200 , TraesCS6B02G301500 , TraesCS4D02G285100 , TraesCS2B02G592600 , TraesCS4D02G207600 , TraesCS2D02G399500 , TraesCS2B02G592900 , TraesCS2A02G590800 , TraesCS2B02G592800 , TraesCS4A02G017700 , TraesCS6A02G274000 , TraesCS2B02G592700 , TraesCS2A02G591200 , TraesCS5D02G161000 , TraesCS6D02G254200 , TraesCS6B02G270100 , TraesCS2B02G420400 , TraesCS6A02G255500
Populus PNT43441


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G091850 - -
2 Sobic.003G167632 - -
3 Sobic.005G076000 expressed protein -
4 Sobic.003G167800 DUF630/DUF632 domains containing protein, putative, expressed -
5 Sobic.002G411200 - -
6 Sobic.009G022800 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
7 Sobic.004G347700 OsFBX250 - F-box domain containing protein, expressed -
8 Sobic.001G167800 single-stranded DNA-binding protein, putative, expressed -
9 Sobic.002G051000 expressed protein K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
10 Sobic.004G191800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.003G081601 - -
12 Sobic.008G040000 PPR repeat containing protein, expressed -
13 Sobic.004G315800 ZOS2-17 - C2H2 zinc finger protein, expressed -
14 Sobic.001G269300 OsFBD15 - F-box and FBD domain containing protein, expressed -
15 Sobic.004G197700 expressed protein -
16 Sobic.006G062400 Leucine Rich Repeat family protein, expressed -
17 Sobic.001G204601 - -
18 Sobic.009G102200 OsMADS75 - MADS-box family gene with M-alpha type-box, expressed -
19 Sobic.008G131700 PsbP, putative, expressed -
20 Sobic.010G221100 RING-H2 finger protein, putative, expressed -


Gene co-expression network
sample Sobic001G179300 Sobic001G179300 Sobic003G091850 Sobic003G091850 Sobic001G179300--Sobic003G091850 Sobic003G167632 Sobic003G167632 Sobic001G179300--Sobic003G167632 Sobic005G076000 Sobic005G076000 Sobic001G179300--Sobic005G076000 Sobic003G167800 Sobic003G167800 Sobic001G179300--Sobic003G167800 Sobic002G411200 Sobic002G411200 Sobic001G179300--Sobic002G411200 Sobic009G022800 Sobic009G022800 Sobic001G179300--Sobic009G022800 Sobic004G347700 Sobic004G347700 Sobic001G179300--Sobic004G347700 Sobic001G167800 Sobic001G167800 Sobic001G179300--Sobic001G167800 Sobic002G051000 Sobic002G051000 Sobic001G179300--Sobic002G051000 Sobic008G182500 Sobic008G182500 Sobic003G091850--Sobic008G182500 Sobic002G394550 Sobic002G394550 Sobic003G091850--Sobic002G394550 Sobic003G257800 Sobic003G257800 Sobic003G091850--Sobic003G257800 Sobic008G178300 Sobic008G178300 Sobic003G091850--Sobic008G178300 Sobic005G108300 Sobic005G108300 Sobic003G091850--Sobic005G108300 Sobic006G062400 Sobic006G062400 Sobic003G091850--Sobic006G062400 Sobic004G046001 Sobic004G046001 Sobic003G091850--Sobic004G046001 Sobic010G104200 Sobic010G104200 Sobic003G091850--Sobic010G104200 Sobic002G284600 Sobic002G284600 Sobic003G091850--Sobic002G284600 Sobic003G167632--Sobic003G167800 Sobic003G057800 Sobic003G057800 Sobic003G167632--Sobic003G057800 Sobic001G479500 Sobic001G479500 Sobic003G167632--Sobic001G479500 Sobic003G167632--Sobic005G076000 Sobic002G376800 Sobic002G376800 Sobic003G167632--Sobic002G376800 Sobic003G357500 Sobic003G357500 Sobic003G167632--Sobic003G357500 Sobic010G248200 Sobic010G248200 Sobic003G167632--Sobic010G248200 Sobic007G132600 Sobic007G132600 Sobic003G167632--Sobic007G132600 Sobic003G107800 Sobic003G107800 Sobic003G167632--Sobic003G107800 Sobic003G178700 Sobic003G178700 Sobic005G076000--Sobic003G178700 Sobic008G105900 Sobic008G105900 Sobic005G076000--Sobic008G105900 Sobic005G076000--Sobic003G167632 Sobic005G076000--Sobic003G167800 Sobic001G269300 Sobic001G269300 Sobic005G076000--Sobic001G269300 Sobic006G180432 Sobic006G180432 Sobic005G076000--Sobic006G180432 Sobic006G060200 Sobic006G060200 Sobic005G076000--Sobic006G060200 Sobic004G315800 Sobic004G315800 Sobic005G076000--Sobic004G315800 Sobic001G217700 Sobic001G217700 Sobic005G076000--Sobic001G217700 Sobic003G167800--Sobic003G167632 Sobic003G167800--Sobic003G057800 Sobic003G167800--Sobic001G479500 Sobic003G167800--Sobic002G376800 Sobic007G073400 Sobic007G073400 Sobic003G167800--Sobic007G073400 Sobic003G167800--Sobic010G248200 Sobic008G161401 Sobic008G161401 Sobic003G167800--Sobic008G161401 Sobic009G110366 Sobic009G110366 Sobic003G167800--Sobic009G110366 Sobic001G046600 Sobic001G046600 Sobic003G167800--Sobic001G046600 Sobic001G260550 Sobic001G260550 Sobic002G411200--Sobic001G260550 Sobic007G060800 Sobic007G060800 Sobic002G411200--Sobic007G060800 Sobic005G035800 Sobic005G035800 Sobic002G411200--Sobic005G035800 Sobic004G088800 Sobic004G088800 Sobic002G411200--Sobic004G088800 Sobic003G231400 Sobic003G231400 Sobic002G411200--Sobic003G231400 Sobic004G201000 Sobic004G201000 Sobic002G411200--Sobic004G201000 Sobic004G290850 Sobic004G290850 Sobic002G411200--Sobic004G290850 Sobic010G155401 Sobic010G155401 Sobic002G411200--Sobic010G155401 Sobic002G427600 Sobic002G427600 Sobic002G411200--Sobic002G427600 Sobic009G066100 Sobic009G066100 Sobic009G022800--Sobic009G066100 Sobic004G221000 Sobic004G221000 Sobic009G022800--Sobic004G221000 Sobic004G216500 Sobic004G216500 Sobic009G022800--Sobic004G216500 Sobic003G163500 Sobic003G163500 Sobic009G022800--Sobic003G163500 Sobic009G022800--Sobic003G167632 Sobic009G022800--Sobic005G076000 Sobic004G257500 Sobic004G257500 Sobic009G022800--Sobic004G257500 Sobic009G022800--Sobic003G178700 Sobic010G248301 Sobic010G248301 Sobic009G022800--Sobic010G248301 Sobic004G347700--Sobic005G035800 Sobic009G152350 Sobic009G152350 Sobic004G347700--Sobic009G152350 Sobic004G071850 Sobic004G071850 Sobic004G347700--Sobic004G071850 Sobic005G225901 Sobic005G225901 Sobic004G347700--Sobic005G225901 Sobic004G081300 Sobic004G081300 Sobic004G347700--Sobic004G081300 Sobic003G081601 Sobic003G081601 Sobic004G347700--Sobic003G081601 Sobic008G094650 Sobic008G094650 Sobic004G347700--Sobic008G094650 Sobic003G111700 Sobic003G111700 Sobic004G347700--Sobic003G111700 Sobic003G260050 Sobic003G260050 Sobic004G347700--Sobic003G260050 Sobic004G183300 Sobic004G183300 Sobic001G167800--Sobic004G183300 Sobic006G122500 Sobic006G122500 Sobic001G167800--Sobic006G122500 Sobic001G489900 Sobic001G489900 Sobic001G167800--Sobic001G489900 Sobic002G104400 Sobic002G104400 Sobic001G167800--Sobic002G104400 Sobic003G089600 Sobic003G089600 Sobic001G167800--Sobic003G089600 Sobic003G077600 Sobic003G077600 Sobic001G167800--Sobic003G077600 Sobic003G336200 Sobic003G336200 Sobic001G167800--Sobic003G336200 Sobic006G168500 Sobic006G168500 Sobic001G167800--Sobic006G168500 Sobic001G316100 Sobic001G316100 Sobic001G167800--Sobic001G316100 Sobic002G176500 Sobic002G176500 Sobic002G051000--Sobic002G176500 Sobic004G096200 Sobic004G096200 Sobic002G051000--Sobic004G096200 Sobic002G051000--Sobic003G167632 Sobic010G218500 Sobic010G218500 Sobic002G051000--Sobic010G218500 Sobic006G141100 Sobic006G141100 Sobic002G051000--Sobic006G141100 Sobic001G028600 Sobic001G028600 Sobic002G051000--Sobic001G028600 Sobic005G130450 Sobic005G130450 Sobic002G051000--Sobic005G130450 Sobic003G395600 Sobic003G395600 Sobic002G051000--Sobic003G395600 Sobic001G243901 Sobic001G243901 Sobic002G051000--Sobic001G243901
Octagon: transcription factors


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