Gene annotation
Transcriptome id Sobic.003G091850.1
Synonym -
Functional annotation -
UniProt A0A1W0VWF1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G182500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thaumatin, putative, expressed -
2 Sobic.002G394550 - -
3 Sobic.003G257800 - -
4 Sobic.008G178300 NBS-LRR disease resistance protein, putative, expressed -
5 Sobic.005G108300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@OsGH3.3 - Probable indole-3-acetic acid-amido synthetase, expressed K14506: jasmonic acid-amino synthetase
6 Sobic.006G062400 Leucine Rich Repeat family protein, expressed -
7 Sobic.004G046001 - -
8 Sobic.010G104200 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.002G284600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR39 - Auxin-responsive SAUR gene family member, expressed -
10 Sobic.006G055100 - -
11 Sobic.010G221100 RING-H2 finger protein, putative, expressed -
12 Sobic.008G178200 NBS-LRR disease resistance protein, putative, expressed -
13 Sobic.001G182300 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.008G142766 - -
15 Sobic.009G109101 - -
16 Sobic.009G237350 - -
17 Sobic.003G263600 glycosyl hydrolase, putative, expressed K01183: chitinase
18 Sobic.001G179300 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
19 Sobic.007G179500 - -
20 Sobic.003G219000 integral membrane protein TmpA, putative, expressed -


Gene co-expression network
sample Sobic003G091850 Sobic003G091850 Sobic008G182500 Sobic008G182500 Sobic003G091850--Sobic008G182500 Sobic002G394550 Sobic002G394550 Sobic003G091850--Sobic002G394550 Sobic003G257800 Sobic003G257800 Sobic003G091850--Sobic003G257800 Sobic008G178300 Sobic008G178300 Sobic003G091850--Sobic008G178300 Sobic005G108300 Sobic005G108300 Sobic003G091850--Sobic005G108300 Sobic006G062400 Sobic006G062400 Sobic003G091850--Sobic006G062400 Sobic004G046001 Sobic004G046001 Sobic003G091850--Sobic004G046001 Sobic010G104200 Sobic010G104200 Sobic003G091850--Sobic010G104200 Sobic002G284600 Sobic002G284600 Sobic003G091850--Sobic002G284600 Sobic006G132200 Sobic006G132200 Sobic008G182500--Sobic006G132200 Sobic008G108900 Sobic008G108900 Sobic008G182500--Sobic008G108900 Sobic009G196700 Sobic009G196700 Sobic008G182500--Sobic009G196700 Sobic005G203400 Sobic005G203400 Sobic008G182500--Sobic005G203400 Sobic005G212600 Sobic005G212600 Sobic008G182500--Sobic005G212600 Sobic002G062300 Sobic002G062300 Sobic008G182500--Sobic002G062300 Sobic009G113600 Sobic009G113600 Sobic008G182500--Sobic009G113600 Sobic007G115000 Sobic007G115000 Sobic008G182500--Sobic007G115000 Sobic009G109101 Sobic009G109101 Sobic008G182500--Sobic009G109101 Sobic002G394550--Sobic003G257800 Sobic002G394550--Sobic003G091850 Sobic001G477500 Sobic001G477500 Sobic002G394550--Sobic001G477500 Sobic001G209550 Sobic001G209550 Sobic002G394550--Sobic001G209550 Sobic002G059700 Sobic002G059700 Sobic002G394550--Sobic002G059700 Sobic010G262950 Sobic010G262950 Sobic002G394550--Sobic010G262950 Sobic002G070500 Sobic002G070500 Sobic002G394550--Sobic002G070500 Sobic005G130500 Sobic005G130500 Sobic002G394550--Sobic005G130500 Sobic008G109650 Sobic008G109650 Sobic002G394550--Sobic008G109650 Sobic003G257800--Sobic002G394550 Sobic003G257800--Sobic003G091850 Sobic003G081601 Sobic003G081601 Sobic003G257800--Sobic003G081601 Sobic002G054901 Sobic002G054901 Sobic003G257800--Sobic002G054901 Sobic006G123600 Sobic006G123600 Sobic003G257800--Sobic006G123600 Sobic009G228201 Sobic009G228201 Sobic003G257800--Sobic009G228201 Sobic003G257800--Sobic002G284600 Sobic003G257800--Sobic005G108300 Sobic002G417700 Sobic002G417700 Sobic003G257800--Sobic002G417700 Sobic008G178200 Sobic008G178200 Sobic008G178300--Sobic008G178200 Sobic009G237350 Sobic009G237350 Sobic008G178300--Sobic009G237350 Sobic008G178300--Sobic002G284600 Sobic001G490700 Sobic001G490700 Sobic008G178300--Sobic001G490700 Sobic004G250100 Sobic004G250100 Sobic008G178300--Sobic004G250100 Sobic005G094001 Sobic005G094001 Sobic008G178300--Sobic005G094001 Sobic003G433600 Sobic003G433600 Sobic008G178300--Sobic003G433600 Sobic003G202700 Sobic003G202700 Sobic008G178300--Sobic003G202700 Sobic007G179500 Sobic007G179500 Sobic008G178300--Sobic007G179500 Sobic003G176100 Sobic003G176100 Sobic005G108300--Sobic003G176100 Sobic010G146200 Sobic010G146200 Sobic005G108300--Sobic010G146200 Sobic007G059300 Sobic007G059300 Sobic005G108300--Sobic007G059300 Sobic006G020600 Sobic006G020600 Sobic005G108300--Sobic006G020600 Sobic005G108300--Sobic009G113600 Sobic010G050600 Sobic010G050600 Sobic005G108300--Sobic010G050600 Sobic005G108300--Sobic008G108900 Sobic008G124100 Sobic008G124100 Sobic005G108300--Sobic008G124100 Sobic005G108300--Sobic009G196700 Sobic007G154800 Sobic007G154800 Sobic006G062400--Sobic007G154800 Sobic003G029300 Sobic003G029300 Sobic006G062400--Sobic003G029300 Sobic008G176732 Sobic008G176732 Sobic006G062400--Sobic008G176732 Sobic006G062400--Sobic006G132200 Sobic007G099500 Sobic007G099500 Sobic006G062400--Sobic007G099500 Sobic001G046600 Sobic001G046600 Sobic006G062400--Sobic001G046600 Sobic001G061600 Sobic001G061600 Sobic006G062400--Sobic001G061600 Sobic004G016500 Sobic004G016500 Sobic006G062400--Sobic004G016500 Sobic003G424100 Sobic003G424100 Sobic006G062400--Sobic003G424100 Sobic008G140000 Sobic008G140000 Sobic004G046001--Sobic008G140000 Sobic004G046001--Sobic004G250100 Sobic008G142766 Sobic008G142766 Sobic004G046001--Sobic008G142766 Sobic001G527600 Sobic001G527600 Sobic004G046001--Sobic001G527600 Sobic006G055100 Sobic006G055100 Sobic004G046001--Sobic006G055100 Sobic004G046001--Sobic003G091850 Sobic008G110900 Sobic008G110900 Sobic004G046001--Sobic008G110900 Sobic004G046001--Sobic008G178300 Sobic002G074300 Sobic002G074300 Sobic004G046001--Sobic002G074300 Sobic010G104200--Sobic006G055100 Sobic005G149000 Sobic005G149000 Sobic010G104200--Sobic005G149000 Sobic010G063433 Sobic010G063433 Sobic010G104200--Sobic010G063433 Sobic002G007250 Sobic002G007250 Sobic010G104200--Sobic002G007250 Sobic008G009500 Sobic008G009500 Sobic010G104200--Sobic008G009500 SobicK024000 SobicK024000 Sobic010G104200--SobicK024000 Sobic008G031350 Sobic008G031350 Sobic010G104200--Sobic008G031350 Sobic010G104200--Sobic005G203400 Sobic010G104200--Sobic009G113600 Sobic002G284600--Sobic009G237350 Sobic002G284600--Sobic008G178300 Sobic002G284600--Sobic008G178200 Sobic003G395600 Sobic003G395600 Sobic002G284600--Sobic003G395600 Sobic002G284600--Sobic002G054901 Sobic003G009501 Sobic003G009501 Sobic002G284600--Sobic003G009501 Sobic004G087200 Sobic004G087200 Sobic002G284600--Sobic004G087200 Sobic003G311250 Sobic003G311250 Sobic002G284600--Sobic003G311250 Sobic010G222600 Sobic010G222600 Sobic002G284600--Sobic010G222600
Octagon: transcription factors


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