Gene annotation
Transcriptome id Sobic.007G179500.1
Synonym
Functional annotation -
UniProt A0A1B6PID2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G250100 pentatricopeptide, putative, expressed -
2 Sobic.001G200600 PPR repeat domain containing protein, putative, expressed -
3 Sobic.001G490700 pentatricopeptide, putative, expressed -
4 Sobic.002G385200 pentatricopeptide, putative, expressed -
5 Sobic.008G178300 NBS-LRR disease resistance protein, putative, expressed -
6 Sobic.008G013900 O-methyltransferase, putative, expressed -
7 Sobic.006G271900 DNA mismatch repair protein MSH3, putative, expressed K08736: DNA mismatch repair protein MSH3
8 Sobic.003G219000 integral membrane protein TmpA, putative, expressed -
9 Sobic.001G182300 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.003G156766 - -
11 Sobic.003G433600 pentatricopeptide, putative, expressed -
12 Sobic.010G067000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
13 Sobic.010G092801 - -
14 Sobic.005G123900 ATP binding protein, putative, expressed K17592: sacsin
15 Sobic.001G412200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
16 Sobic.010G143400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.008G182500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thaumatin, putative, expressed -
18 Sobic.002G389200 pentatricopeptide repeat domain containing protein, putative, expressed -
19 Sobic.001G164200 cytochrome P450, putative, expressed -
20 Sobic.007G179600 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic007G179500 Sobic007G179500 Sobic004G250100 Sobic004G250100 Sobic007G179500--Sobic004G250100 Sobic001G200600 Sobic001G200600 Sobic007G179500--Sobic001G200600 Sobic001G490700 Sobic001G490700 Sobic007G179500--Sobic001G490700 Sobic002G385200 Sobic002G385200 Sobic007G179500--Sobic002G385200 Sobic008G178300 Sobic008G178300 Sobic007G179500--Sobic008G178300 Sobic008G013900 Sobic008G013900 Sobic007G179500--Sobic008G013900 Sobic006G271900 Sobic006G271900 Sobic007G179500--Sobic006G271900 Sobic003G219000 Sobic003G219000 Sobic007G179500--Sobic003G219000 Sobic001G182300 Sobic001G182300 Sobic007G179500--Sobic001G182300 Sobic004G250100--Sobic007G179500 Sobic003G433600 Sobic003G433600 Sobic004G250100--Sobic003G433600 Sobic004G250100--Sobic001G200600 Sobic003G213800 Sobic003G213800 Sobic004G250100--Sobic003G213800 Sobic010G143400 Sobic010G143400 Sobic004G250100--Sobic010G143400 Sobic004G250100--Sobic001G490700 Sobic004G250100--Sobic008G178300 Sobic004G250100--Sobic002G385200 Sobic001G527600 Sobic001G527600 Sobic004G250100--Sobic001G527600 Sobic001G200600--Sobic004G250100 Sobic009G042500 Sobic009G042500 Sobic001G200600--Sobic009G042500 Sobic001G200600--Sobic003G433600 Sobic001G200600--Sobic007G179500 Sobic010G092801 Sobic010G092801 Sobic001G200600--Sobic010G092801 Sobic003G203100 Sobic003G203100 Sobic001G200600--Sobic003G203100 Sobic001G200600--Sobic001G490700 Sobic010G067000 Sobic010G067000 Sobic001G200600--Sobic010G067000 Sobic008G041000 Sobic008G041000 Sobic001G200600--Sobic008G041000 Sobic008G178200 Sobic008G178200 Sobic001G490700--Sobic008G178200 Sobic001G490700--Sobic008G178300 Sobic001G490700--Sobic004G250100 Sobic001G490700--Sobic007G179500 Sobic001G490700--Sobic003G433600 Sobic001G490700--Sobic003G203100 Sobic006G197500 Sobic006G197500 Sobic001G490700--Sobic006G197500 Sobic005G108300 Sobic005G108300 Sobic001G490700--Sobic005G108300 Sobic004G033300 Sobic004G033300 Sobic001G490700--Sobic004G033300 Sobic005G210700 Sobic005G210700 Sobic002G385200--Sobic005G210700 Sobic005G148500 Sobic005G148500 Sobic002G385200--Sobic005G148500 Sobic002G385200--Sobic001G182300 Sobic005G148400 Sobic005G148400 Sobic002G385200--Sobic005G148400 Sobic006G099501 Sobic006G099501 Sobic002G385200--Sobic006G099501 Sobic001G001200 Sobic001G001200 Sobic002G385200--Sobic001G001200 Sobic008G066900 Sobic008G066900 Sobic002G385200--Sobic008G066900 Sobic007G179600 Sobic007G179600 Sobic002G385200--Sobic007G179600 Sobic002G385200--Sobic010G143400 Sobic008G178300--Sobic008G178200 Sobic009G237350 Sobic009G237350 Sobic008G178300--Sobic009G237350 Sobic002G284600 Sobic002G284600 Sobic008G178300--Sobic002G284600 Sobic008G178300--Sobic001G490700 Sobic008G178300--Sobic004G250100 Sobic005G094001 Sobic005G094001 Sobic008G178300--Sobic005G094001 Sobic008G178300--Sobic003G433600 Sobic003G202700 Sobic003G202700 Sobic008G178300--Sobic003G202700 Sobic008G178300--Sobic007G179500 Sobic001G164200 Sobic001G164200 Sobic008G013900--Sobic001G164200 Sobic008G013900--Sobic001G182300 Sobic008G124100 Sobic008G124100 Sobic008G013900--Sobic008G124100 Sobic008G013900--Sobic003G219000 Sobic007G129401 Sobic007G129401 Sobic008G013900--Sobic007G129401 Sobic008G049000 Sobic008G049000 Sobic008G013900--Sobic008G049000 Sobic002G094500 Sobic002G094500 Sobic008G013900--Sobic002G094500 Sobic003G176100 Sobic003G176100 Sobic008G013900--Sobic003G176100 Sobic008G013900--Sobic010G143400 Sobic001G040600 Sobic001G040600 Sobic006G271900--Sobic001G040600 Sobic007G060600 Sobic007G060600 Sobic006G271900--Sobic007G060600 Sobic009G253200 Sobic009G253200 Sobic006G271900--Sobic009G253200 Sobic001G049800 Sobic001G049800 Sobic006G271900--Sobic001G049800 Sobic006G111200 Sobic006G111200 Sobic006G271900--Sobic006G111200 Sobic002G251800 Sobic002G251800 Sobic006G271900--Sobic002G251800 Sobic001G480400 Sobic001G480400 Sobic006G271900--Sobic001G480400 Sobic005G028300 Sobic005G028300 Sobic006G271900--Sobic005G028300 Sobic001G081300 Sobic001G081300 Sobic006G271900--Sobic001G081300 Sobic003G219000--Sobic008G049000 Sobic003G219000--Sobic001G182300 Sobic003G219000--Sobic008G013900 Sobic003G219000--Sobic001G164200 Sobic003G219000--Sobic002G094500 Sobic002G060500 Sobic002G060500 Sobic003G219000--Sobic002G060500 Sobic007G066050 Sobic007G066050 Sobic003G219000--Sobic007G066050 Sobic003G219000--Sobic007G129401 Sobic006G132200 Sobic006G132200 Sobic003G219000--Sobic006G132200 Sobic001G182300--Sobic008G013900 Sobic001G182300--Sobic003G219000 Sobic001G182300--Sobic001G164200 Sobic001G182300--Sobic002G094500 Sobic001G182300--Sobic008G049000 Sobic001G182300--Sobic008G124100 Sobic001G182300--Sobic007G129401 Sobic001G182300--Sobic007G066050 Sobic009G026400 Sobic009G026400 Sobic001G182300--Sobic009G026400
Octagon: transcription factors


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