Gene annotation
Transcriptome id Sobic.001G323900.2
Synonym Sb01g031390
Functional annotation OsFBX238 - F-box domain containing protein, expressed
UniProt C5WVG1
Pfam PF00646
Panther DB PTHR10706 PTHR10706:SF128
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G07610 : F-box family protein
RAP-DB (Rice) LOC_Os07g35060.1 : OsFBX238 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G322700 expressed protein -
2 Sobic.010G024000 transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
3 Sobic.003G091300 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
4 Sobic.009G136000 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
5 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
6 Sobic.009G158900 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.009G084800 - -
8 Sobic.007G146200 pectinesterase, putative, expressed K01051: pectinesterase
9 Sobic.003G289700 ulp1 protease family protein, putative, expressed K16287: ubiquitin-like-specific protease 1C/D
10 Sobic.009G066600 expressed protein -
11 Sobic.008G131900 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@resistance protein LR10, putative, expressed -
12 Sobic.001G288000 ankyrin repeat domain containing protein, putative, expressed -
13 Sobic.003G216600 BAH domain containing protein, expressed -
14 Sobic.005G008850 - -
15 Sobic.009G131200 expressed protein -
16 Sobic.008G180200 expressed protein -
17 Sobic.004G313400 transcription elongation factor SPT5 homolog 1, putative, expressed K15172: SUPT5H, transcription elongation factor SPT5
18 Sobic.009G138300 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
19 Sobic.006G116000 Glycerophosphoryl diester phosphodiesterase family protein (Os)(PubMedID : 27208977)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
20 Sobic.003G336900 inactive receptor kinase At2g26730 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G323900 Sobic001G323900 Sobic002G322700 Sobic002G322700 Sobic001G323900--Sobic002G322700 Sobic010G024000 Sobic010G024000 Sobic001G323900--Sobic010G024000 Sobic003G091300 Sobic003G091300 Sobic001G323900--Sobic003G091300 Sobic009G136000 Sobic009G136000 Sobic001G323900--Sobic009G136000 Sobic010G009700 Sobic010G009700 Sobic001G323900--Sobic010G009700 Sobic009G158900 Sobic009G158900 Sobic001G323900--Sobic009G158900 Sobic009G084800 Sobic009G084800 Sobic001G323900--Sobic009G084800 Sobic007G146200 Sobic007G146200 Sobic001G323900--Sobic007G146200 Sobic003G289700 Sobic003G289700 Sobic001G323900--Sobic003G289700 Sobic002G322700--Sobic010G009700 Sobic005G045800 Sobic005G045800 Sobic002G322700--Sobic005G045800 Sobic002G322700--Sobic007G146200 Sobic001G131900 Sobic001G131900 Sobic002G322700--Sobic001G131900 Sobic008G140600 Sobic008G140600 Sobic002G322700--Sobic008G140600 Sobic001G385300 Sobic001G385300 Sobic002G322700--Sobic001G385300 Sobic007G105700 Sobic007G105700 Sobic002G322700--Sobic007G105700 Sobic009G066200 Sobic009G066200 Sobic002G322700--Sobic009G066200 Sobic008G188800 Sobic008G188800 Sobic002G322700--Sobic008G188800 Sobic010G222800 Sobic010G222800 Sobic010G024000--Sobic010G222800 Sobic008G131900 Sobic008G131900 Sobic010G024000--Sobic008G131900 Sobic007G076200 Sobic007G076200 Sobic010G024000--Sobic007G076200 Sobic003G411700 Sobic003G411700 Sobic010G024000--Sobic003G411700 Sobic002G271400 Sobic002G271400 Sobic010G024000--Sobic002G271400 Sobic002G173400 Sobic002G173400 Sobic010G024000--Sobic002G173400 Sobic006G193100 Sobic006G193100 Sobic010G024000--Sobic006G193100 Sobic003G343200 Sobic003G343200 Sobic010G024000--Sobic003G343200 Sobic002G052800 Sobic002G052800 Sobic010G024000--Sobic002G052800 Sobic010G111750 Sobic010G111750 Sobic003G091300--Sobic010G111750 Sobic001G288000 Sobic001G288000 Sobic003G091300--Sobic001G288000 Sobic002G178700 Sobic002G178700 Sobic003G091300--Sobic002G178700 Sobic001G137500 Sobic001G137500 Sobic003G091300--Sobic001G137500 Sobic003G006000 Sobic003G006000 Sobic003G091300--Sobic003G006000 Sobic002G258000 Sobic002G258000 Sobic003G091300--Sobic002G258000 Sobic001G419500 Sobic001G419500 Sobic003G091300--Sobic001G419500 Sobic002G205000 Sobic002G205000 Sobic003G091300--Sobic002G205000 Sobic004G031501 Sobic004G031501 Sobic003G091300--Sobic004G031501 Sobic010G038200 Sobic010G038200 Sobic009G136000--Sobic010G038200 Sobic001G082800 Sobic001G082800 Sobic009G136000--Sobic001G082800 Sobic009G125800 Sobic009G125800 Sobic009G136000--Sobic009G125800 Sobic009G136000--Sobic008G131900 Sobic010G030000 Sobic010G030000 Sobic009G136000--Sobic010G030000 Sobic009G136000--Sobic006G193100 Sobic002G390800 Sobic002G390800 Sobic009G136000--Sobic002G390800 Sobic009G131200 Sobic009G131200 Sobic009G136000--Sobic009G131200 Sobic009G136000--Sobic002G052800 Sobic004G298600 Sobic004G298600 Sobic010G009700--Sobic004G298600 Sobic010G009700--Sobic001G131900 Sobic010G009700--Sobic010G038200 Sobic006G189000 Sobic006G189000 Sobic010G009700--Sobic006G189000 Sobic005G060100 Sobic005G060100 Sobic010G009700--Sobic005G060100 Sobic009G054400 Sobic009G054400 Sobic010G009700--Sobic009G054400 Sobic010G009700--Sobic002G322700 Sobic002G151500 Sobic002G151500 Sobic010G009700--Sobic002G151500 Sobic007G102300 Sobic007G102300 Sobic010G009700--Sobic007G102300 Sobic003G336900 Sobic003G336900 Sobic009G158900--Sobic003G336900 Sobic009G024900 Sobic009G024900 Sobic009G158900--Sobic009G024900 Sobic009G158900--Sobic002G390800 Sobic008G169400 Sobic008G169400 Sobic009G158900--Sobic008G169400 Sobic009G158900--Sobic006G193100 Sobic009G158900--Sobic002G173400 Sobic004G063600 Sobic004G063600 Sobic009G158900--Sobic004G063600 Sobic007G221700 Sobic007G221700 Sobic009G158900--Sobic007G221700 Sobic001G079900 Sobic001G079900 Sobic009G158900--Sobic001G079900 Sobic009G084700 Sobic009G084700 Sobic009G084800--Sobic009G084700 Sobic004G313400 Sobic004G313400 Sobic009G084800--Sobic004G313400 Sobic009G084800--Sobic001G131900 Sobic009G084800--Sobic002G151500 Sobic009G084800--Sobic002G322700 Sobic009G084800--Sobic008G140600 Sobic003G396500 Sobic003G396500 Sobic009G084800--Sobic003G396500 Sobic007G141600 Sobic007G141600 Sobic009G084800--Sobic007G141600 Sobic009G066600 Sobic009G066600 Sobic009G084800--Sobic009G066600 Sobic007G146200--Sobic002G322700 Sobic007G146200--Sobic008G188800 Sobic003G072700 Sobic003G072700 Sobic007G146200--Sobic003G072700 Sobic007G146200--Sobic010G009700 Sobic007G146200--Sobic009G125800 Sobic006G152700 Sobic006G152700 Sobic007G146200--Sobic006G152700 Sobic007G146200--Sobic005G045800 Sobic007G146200--Sobic007G141600 Sobic007G146200--Sobic008G140600 Sobic005G172700 Sobic005G172700 Sobic003G289700--Sobic005G172700 Sobic003G289700--Sobic003G343200 Sobic003G289700--Sobic010G222800 Sobic010G237800 Sobic010G237800 Sobic003G289700--Sobic010G237800 Sobic003G320100 Sobic003G320100 Sobic003G289700--Sobic003G320100 Sobic006G106200 Sobic006G106200 Sobic003G289700--Sobic006G106200 Sobic009G138300 Sobic009G138300 Sobic003G289700--Sobic009G138300 Sobic010G243100 Sobic010G243100 Sobic003G289700--Sobic010G243100 Sobic005G160200 Sobic005G160200 Sobic003G289700--Sobic005G160200
Octagon: transcription factors


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