Gene annotation
Transcriptome id Sobic.001G355100.1
Synonym Sb01g033950
Functional annotation F-actin-capping protein subunit beta, putative, expressed
UniProt A0A1B6QMZ0
Pfam PF01115
Panther DB PTHR10619
NCBI CDD KOG3174; F-actin capping protein, beta subunit
KEGG Orthology K10365; capping protein (actin filament) muscle Z-line, beta
Gene Ontology GO:0008290; F-actin capping protein complex


Orthologs (automatic annotation)
TAIR AT1G71790 : Subunits of heterodimeric actin filament capping protein Capz superfamily
RAP-DB (Rice) LOC_Os03g26450.1 : F-actin-capping protein subunit beta, putative, expressed
MaizeGDB (Corn) Zm00025a002675
Brachypodium KQK21486 , KQK21487
Barley HORVU4Hr1G038670.1
Wheat TraesCS4A02G147200 , TraesCS4A02G147200 , TraesCS4B02G166200 , TraesCS4B02G166200 , TraesCS4B02G166200 , TraesCS4D02G160800 , TraesCS4D02G160800
Populus -


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cDNA sequences
Sobic.001G355100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G431600 expressed protein -
2 Sobic.001G203500 pentatricopeptide, putative, expressed -
3 Sobic.009G120400 methyltransferase, putative, expressed -
4 Sobic.004G063300 expressed protein -
5 Sobic.004G354100 OsSigP5 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed K13280: SEC11, signal peptidase I
6 Sobic.002G426100 aldehyde dehydrogenase, putative, expressed -
7 Sobic.004G157500 RNA polymerase III RPC4 domain containing protein, expressed K03026: RPC4, DNA-directed RNA polymerase III subunit RPC4
8 Sobic.003G135500 sugar transporter superfamily, putative, expressed -
9 Sobic.002G363800 expressed protein -
10 Sobic.007G076200 VERNALIZATION-INSENSITIVE, putative, expressed -
11 Sobic.007G154350 - -
12 Sobic.002G239601 - -
13 Sobic.002G320600 HEAT repeat family protein, putative, expressed -
14 Sobic.004G270300 - -
15 Sobic.002G173400 expressed protein -
16 Sobic.006G181800 gamma-tubulin complex component 6, putative, expressed K16573: TUBGCP6, gamma-tubulin complex component 6
17 Sobic.010G024000 transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
18 Sobic.004G030400 expressed protein -
19 Sobic.002G192900 expressed protein -
20 Sobic.007G186400 resistance protein, putative, expressed -


Gene co-expression network
sample Sobic001G355100 Sobic001G355100 Sobic003G431600 Sobic003G431600 Sobic001G355100--Sobic003G431600 Sobic001G203500 Sobic001G203500 Sobic001G355100--Sobic001G203500 Sobic009G120400 Sobic009G120400 Sobic001G355100--Sobic009G120400 Sobic004G063300 Sobic004G063300 Sobic001G355100--Sobic004G063300 Sobic004G354100 Sobic004G354100 Sobic001G355100--Sobic004G354100 Sobic002G426100 Sobic002G426100 Sobic001G355100--Sobic002G426100 Sobic004G157500 Sobic004G157500 Sobic001G355100--Sobic004G157500 Sobic003G135500 Sobic003G135500 Sobic001G355100--Sobic003G135500 Sobic002G363800 Sobic002G363800 Sobic001G355100--Sobic002G363800 Sobic003G431600--Sobic003G135500 Sobic003G431600--Sobic001G203500 Sobic008G092800 Sobic008G092800 Sobic003G431600--Sobic008G092800 Sobic006G181800 Sobic006G181800 Sobic003G431600--Sobic006G181800 Sobic003G250900 Sobic003G250900 Sobic003G431600--Sobic003G250900 Sobic001G300000 Sobic001G300000 Sobic003G431600--Sobic001G300000 Sobic001G541000 Sobic001G541000 Sobic003G431600--Sobic001G541000 Sobic003G431600--Sobic002G426100 Sobic006G265600 Sobic006G265600 Sobic003G431600--Sobic006G265600 Sobic001G203500--Sobic003G431600 Sobic001G203500--Sobic004G157500 Sobic004G064600 Sobic004G064600 Sobic001G203500--Sobic004G064600 Sobic001G203500--Sobic004G354100 Sobic001G203500--Sobic006G265600 Sobic001G203500--Sobic002G426100 Sobic009G260700 Sobic009G260700 Sobic001G203500--Sobic009G260700 Sobic001G191900 Sobic001G191900 Sobic001G203500--Sobic001G191900 Sobic001G203500--Sobic003G135500 Sobic002G173400 Sobic002G173400 Sobic009G120400--Sobic002G173400 Sobic009G120400--Sobic002G426100 Sobic007G034200 Sobic007G034200 Sobic009G120400--Sobic007G034200 Sobic003G194800 Sobic003G194800 Sobic009G120400--Sobic003G194800 Sobic004G215600 Sobic004G215600 Sobic009G120400--Sobic004G215600 Sobic007G105700 Sobic007G105700 Sobic009G120400--Sobic007G105700 Sobic003G299500 Sobic003G299500 Sobic009G120400--Sobic003G299500 Sobic007G186400 Sobic007G186400 Sobic009G120400--Sobic007G186400 Sobic001G051400 Sobic001G051400 Sobic009G120400--Sobic001G051400 Sobic010G038900 Sobic010G038900 Sobic004G063300--Sobic010G038900 Sobic009G008200 Sobic009G008200 Sobic004G063300--Sobic009G008200 Sobic002G066800 Sobic002G066800 Sobic004G063300--Sobic002G066800 Sobic004G350200 Sobic004G350200 Sobic004G063300--Sobic004G350200 Sobic002G141200 Sobic002G141200 Sobic004G063300--Sobic002G141200 Sobic004G063300--Sobic007G034200 Sobic002G322400 Sobic002G322400 Sobic004G063300--Sobic002G322400 Sobic004G063300--Sobic001G051400 Sobic002G274700 Sobic002G274700 Sobic004G063300--Sobic002G274700 Sobic001G229300 Sobic001G229300 Sobic004G354100--Sobic001G229300 Sobic003G085500 Sobic003G085500 Sobic004G354100--Sobic003G085500 Sobic010G002800 Sobic010G002800 Sobic004G354100--Sobic010G002800 Sobic004G354100--Sobic001G191900 Sobic004G256300 Sobic004G256300 Sobic004G354100--Sobic004G256300 Sobic007G022700 Sobic007G022700 Sobic004G354100--Sobic007G022700 Sobic004G354100--Sobic001G203500 Sobic002G153400 Sobic002G153400 Sobic004G354100--Sobic002G153400 Sobic001G485300 Sobic001G485300 Sobic004G354100--Sobic001G485300 Sobic002G426100--Sobic009G120400 Sobic008G111600 Sobic008G111600 Sobic002G426100--Sobic008G111600 Sobic002G426100--Sobic006G181800 Sobic002G078100 Sobic002G078100 Sobic002G426100--Sobic002G078100 Sobic002G043000 Sobic002G043000 Sobic002G426100--Sobic002G043000 Sobic006G017800 Sobic006G017800 Sobic002G426100--Sobic006G017800 Sobic002G426100--Sobic002G066800 Sobic002G426100--Sobic007G186400 Sobic004G129500 Sobic004G129500 Sobic002G426100--Sobic004G129500 Sobic004G157500--Sobic009G120400 Sobic010G024000 Sobic010G024000 Sobic004G157500--Sobic010G024000 Sobic004G157500--Sobic004G064600 Sobic004G157500--Sobic001G203500 Sobic004G157500--Sobic002G173400 Sobic006G095000 Sobic006G095000 Sobic004G157500--Sobic006G095000 Sobic004G157500--Sobic002G426100 Sobic001G248400 Sobic001G248400 Sobic004G157500--Sobic001G248400 Sobic008G047500 Sobic008G047500 Sobic004G157500--Sobic008G047500 Sobic006G280100 Sobic006G280100 Sobic003G135500--Sobic006G280100 Sobic003G135500--Sobic003G431600 Sobic003G135500--Sobic003G299500 Sobic003G135500--Sobic006G181800 Sobic003G135500--Sobic009G120400 Sobic003G360300 Sobic003G360300 Sobic003G135500--Sobic003G360300 Sobic008G080500 Sobic008G080500 Sobic003G135500--Sobic008G080500 Sobic003G135500--Sobic008G092800 Sobic002G079100 Sobic002G079100 Sobic003G135500--Sobic002G079100 Sobic002G296400 Sobic002G296400 Sobic002G363800--Sobic002G296400 Sobic002G371600 Sobic002G371600 Sobic002G363800--Sobic002G371600 Sobic001G125500 Sobic001G125500 Sobic002G363800--Sobic001G125500 Sobic001G097900 Sobic001G097900 Sobic002G363800--Sobic001G097900 Sobic003G256800 Sobic003G256800 Sobic002G363800--Sobic003G256800 Sobic002G363800--Sobic008G092800 Sobic007G145400 Sobic007G145400 Sobic002G363800--Sobic007G145400 Sobic001G340000 Sobic001G340000 Sobic002G363800--Sobic001G340000 Sobic003G230600 Sobic003G230600 Sobic002G363800--Sobic003G230600
Octagon: transcription factors


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