Gene annotation
Transcriptome id Sobic.001G357800.1
Synonym Sb01g034180
Functional annotation amino acid permease family protein, putative, expressed
UniProt A0A1Z5S9E3
Pfam PF13520
Panther DB PTHR11785 PTHR11785:SF335
NCBI CDD KOG1287; Amino acid transporters
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0015171amino acid transmembrane transporter activity GO:0003333amino acid transmembrane transport


Orthologs (automatic annotation)
TAIR AT3G13620 : Amino acid permease family protein
RAP-DB (Rice) LOC_Os03g25920.1 : amino acid permease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a002655 , Zm00025a002652 , Zm00025a002651
Brachypodium PNT77334 , KQK21521 , KQK21520
Barley HORVU3Hr1G005010.4 , HORVU3Hr1G005010.3 , HORVU4Hr1G085290.12 , HORVU4Hr1G085290.13 , HORVU4Hr1G085290.10 , HORVU4Hr1G085290.11 , HORVU4Hr1G085290.4 , HORVU4Hr1G085290.5 , HORVU4Hr1G085290.6 , HORVU4Hr1G085290.8 , HORVU4Hr1G085290.9
Wheat TraesCS7B02G365600 , TraesCS3A02G030900 , TraesCS5D02G531700 , TraesCS5A02G315000 , TraesCS7D02G452600 , TraesCS5B02G533500 , TraesCS5D02G321300 , TraesCS7A02G464900 , TraesCS4D02G344800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G023300 photosystem II core complex proteins psbY, chloroplast precursor, putative, expressed K02723: photosystem II PsbY protein
2 Sobic.001G407900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase C, putative, expressed -
3 Sobic.003G187000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.010G265500 expressed protein -
5 Sobic.004G193400 photosystem II 5 kDa protein, chloroplast precursor, putative, expressed -
6 Sobic.001G498300 galactose mutarotase-like, putative, expressed -
7 Sobic.006G280050 - K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
8 Sobic.004G314800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.001G339100 glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
10 Sobic.003G328200 thylakoid lumenal 20 kDa protein, putative, expressed -
11 Sobic.010G116500 expressed protein -
12 Sobic.001G065500 ZOS3-19 - C2H2 zinc finger protein, expressed -
13 Sobic.004G007500 cytochrome P450, putative, expressed K10528: hydroperoxide lyase
14 Sobic.007G178500 cytochrome P450, putative, expressed -
15 Sobic.001G042301 - -
16 Sobic.003G246600 plastid-specific 50S ribosomal protein 6, chloroplast precursor, putative, expressed K19035: 50S ribosomal protein 6
17 Sobic.009G146400 dnaJ domain containing protein, expressed K09519: DnaJ homolog subfamily B member 13
18 Sobic.003G106500 expressed protein -
19 Sobic.002G384400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K03146: THI4, cysteine-dependent adenosine diphosphate thiazole synthase
20 Sobic.001G281800 enzyme of the cupin superfamily protein, putative, expressed -


Gene co-expression network
sample Sobic001G357800 Sobic001G357800 Sobic007G023300 Sobic007G023300 Sobic001G357800--Sobic007G023300 Sobic001G407900 Sobic001G407900 Sobic001G357800--Sobic001G407900 Sobic003G187000 Sobic003G187000 Sobic001G357800--Sobic003G187000 Sobic010G265500 Sobic010G265500 Sobic001G357800--Sobic010G265500 Sobic004G193400 Sobic004G193400 Sobic001G357800--Sobic004G193400 Sobic001G498300 Sobic001G498300 Sobic001G357800--Sobic001G498300 Sobic006G280050 Sobic006G280050 Sobic001G357800--Sobic006G280050 Sobic004G314800 Sobic004G314800 Sobic001G357800--Sobic004G314800 Sobic001G339100 Sobic001G339100 Sobic001G357800--Sobic001G339100 Sobic007G023300--Sobic004G193400 Sobic002G414400 Sobic002G414400 Sobic007G023300--Sobic002G414400 Sobic007G023300--Sobic001G407900 Sobic008G063500 Sobic008G063500 Sobic007G023300--Sobic008G063500 Sobic001G206200 Sobic001G206200 Sobic007G023300--Sobic001G206200 Sobic002G338000 Sobic002G338000 Sobic007G023300--Sobic002G338000 Sobic007G023300--Sobic001G339100 Sobic007G178500 Sobic007G178500 Sobic007G023300--Sobic007G178500 Sobic002G030200 Sobic002G030200 Sobic007G023300--Sobic002G030200 Sobic001G407900--Sobic007G023300 Sobic001G407900--Sobic001G339100 Sobic001G407900--Sobic001G498300 Sobic001G407900--Sobic001G206200 Sobic010G218600 Sobic010G218600 Sobic001G407900--Sobic010G218600 Sobic008G117400 Sobic008G117400 Sobic001G407900--Sobic008G117400 Sobic001G042301 Sobic001G042301 Sobic001G407900--Sobic001G042301 Sobic002G242000 Sobic002G242000 Sobic001G407900--Sobic002G242000 Sobic001G407900--Sobic004G193400 Sobic003G187000--Sobic007G178500 Sobic003G187000--Sobic001G498300 Sobic003G187000--Sobic010G265500 Sobic003G187000--Sobic004G314800 Sobic009G028400 Sobic009G028400 Sobic003G187000--Sobic009G028400 Sobic004G343100 Sobic004G343100 Sobic003G187000--Sobic004G343100 Sobic003G187000--Sobic008G063500 Sobic005G021600 Sobic005G021600 Sobic003G187000--Sobic005G021600 Sobic003G187000--Sobic007G023300 Sobic010G265500--Sobic005G021600 Sobic010G265500--Sobic003G187000 Sobic010G265500--Sobic004G343100 Sobic010G265500--Sobic010G218600 Sobic010G265500--Sobic007G178500 Sobic010G265500--Sobic009G028400 Sobic010G265500--Sobic001G498300 Sobic008G063100 Sobic008G063100 Sobic010G265500--Sobic008G063100 Sobic001G447700 Sobic001G447700 Sobic010G265500--Sobic001G447700 Sobic004G234200 Sobic004G234200 Sobic004G193400--Sobic004G234200 Sobic004G193400--Sobic002G414400 Sobic002G297300 Sobic002G297300 Sobic004G193400--Sobic002G297300 Sobic004G193400--Sobic007G023300 Sobic009G091800 Sobic009G091800 Sobic004G193400--Sobic009G091800 Sobic002G288300 Sobic002G288300 Sobic004G193400--Sobic002G288300 Sobic010G022100 Sobic010G022100 Sobic004G193400--Sobic010G022100 Sobic004G193400--Sobic008G117400 Sobic004G193400--Sobic002G030200 Sobic001G498300--Sobic010G218600 Sobic001G498300--Sobic003G187000 Sobic001G498300--Sobic007G178500 Sobic001G498300--Sobic001G407900 Sobic001G498300--Sobic008G063500 Sobic001G498300--Sobic004G343100 Sobic001G498300--Sobic005G021600 Sobic005G192600 Sobic005G192600 Sobic001G498300--Sobic005G192600 Sobic001G498300--Sobic004G314800 Sobic001G191000 Sobic001G191000 Sobic006G280050--Sobic001G191000 Sobic001G027600 Sobic001G027600 Sobic006G280050--Sobic001G027600 Sobic003G246400 Sobic003G246400 Sobic006G280050--Sobic003G246400 Sobic004G044000 Sobic004G044000 Sobic006G280050--Sobic004G044000 Sobic004G191200 Sobic004G191200 Sobic006G280050--Sobic004G191200 Sobic004G317900 Sobic004G317900 Sobic006G280050--Sobic004G317900 Sobic001G017000 Sobic001G017000 Sobic006G280050--Sobic001G017000 Sobic001G076500 Sobic001G076500 Sobic006G280050--Sobic001G076500 Sobic001G453300 Sobic001G453300 Sobic006G280050--Sobic001G453300 Sobic002G305700 Sobic002G305700 Sobic004G314800--Sobic002G305700 Sobic006G248200 Sobic006G248200 Sobic004G314800--Sobic006G248200 Sobic004G314800--Sobic006G280050 Sobic006G111600 Sobic006G111600 Sobic004G314800--Sobic006G111600 Sobic003G328200 Sobic003G328200 Sobic004G314800--Sobic003G328200 Sobic007G171800 Sobic007G171800 Sobic004G314800--Sobic007G171800 Sobic002G131700 Sobic002G131700 Sobic004G314800--Sobic002G131700 Sobic007G034500 Sobic007G034500 Sobic004G314800--Sobic007G034500 Sobic003G330100 Sobic003G330100 Sobic004G314800--Sobic003G330100 Sobic001G339100--Sobic009G028400 Sobic001G339100--Sobic007G023300 Sobic001G339100--Sobic001G407900 Sobic001G006000 Sobic001G006000 Sobic001G339100--Sobic001G006000 Sobic001G339100--Sobic007G178500 Sobic001G339100--Sobic005G021600 Sobic001G339100--Sobic008G063500 Sobic003G221700 Sobic003G221700 Sobic001G339100--Sobic003G221700 Sobic006G197700 Sobic006G197700 Sobic001G339100--Sobic006G197700
Octagon: transcription factors


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