Gene annotation
Transcriptome id Sobic.001G366100.1,Sobic.001G366100.3,Sobic.001G366100.4,Sobic.001G366100.6,Sobic.001G366100.5,Sobic.001G366100.2
Synonym SRG1, ATSRG1, Sb01g034890
Functional annotation flavonol synthase/flavanone 3-hydroxylase, putative, expressed
UniProt A0A1Z5S9E6 , C5WZM7
Pfam PF03171 PF14226 PF03171
Panther DB PTHR10209 PTHR10209:SF208
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G17020 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein,senescence-related gene 1
RAP-DB (Rice) LOC_Os10g40934.3,LOC_Os10g40934.11 : flavonol synthase/flavanone 3-hydroxylase, putative, expressed
MaizeGDB (Corn) Zm00025a002549 , Zm00025a002545
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G148900 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
2 Sobic.002G421200 IN2-1 protein, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.001G185450 - -
4 Sobic.003G340800 transmembrane amino acid transporter protein, putative, expressed -
5 Sobic.006G201400 seed specific protein Bn15D1B, putative, expressed -
6 Sobic.005G179200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK112d - OsWAK receptor-like protein kinase, expressed -
7 Sobic.002G251000 expressed protein -
8 Sobic.001G351000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
9 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
10 Sobic.010G213700 GDU1, putative, expressed -
11 Sobic.002G318000 DUF584 domain containing protein, putative, expressed -
12 Sobic.003G254300 peroxiredoxin, putative, expressed -
13 Sobic.010G084100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
14 Sobic.005G101700 dirigent, putative, expressed -
15 Sobic.001G393500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ca2+ sensors group(PubMedID : 30367619)@EF hand family protein, putative, expressed K02183: calmodulin
16 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
17 Sobic.004G189400 expressed protein -
18 Sobic.005G206601 - -
19 Sobic.001G231400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
20 Sobic.006G153100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -


Gene co-expression network
sample Sobic001G366100 Sobic001G366100 Sobic006G148900 Sobic006G148900 Sobic001G366100--Sobic006G148900 Sobic002G421200 Sobic002G421200 Sobic001G366100--Sobic002G421200 Sobic001G185450 Sobic001G185450 Sobic001G366100--Sobic001G185450 Sobic003G340800 Sobic003G340800 Sobic001G366100--Sobic003G340800 Sobic006G201400 Sobic006G201400 Sobic001G366100--Sobic006G201400 Sobic005G179200 Sobic005G179200 Sobic001G366100--Sobic005G179200 Sobic002G251000 Sobic002G251000 Sobic001G366100--Sobic002G251000 Sobic001G351000 Sobic001G351000 Sobic001G366100--Sobic001G351000 Sobic010G084700 Sobic010G084700 Sobic001G366100--Sobic010G084700 Sobic001G423800 Sobic001G423800 Sobic006G148900--Sobic001G423800 Sobic006G148900--Sobic010G084700 Sobic010G176600 Sobic010G176600 Sobic006G148900--Sobic010G176600 Sobic004G221500 Sobic004G221500 Sobic006G148900--Sobic004G221500 Sobic001G177800 Sobic001G177800 Sobic006G148900--Sobic001G177800 Sobic004G189400 Sobic004G189400 Sobic006G148900--Sobic004G189400 Sobic006G148900--Sobic002G251000 Sobic003G282901 Sobic003G282901 Sobic006G148900--Sobic003G282901 Sobic004G216600 Sobic004G216600 Sobic006G148900--Sobic004G216600 Sobic009G161500 Sobic009G161500 Sobic002G421200--Sobic009G161500 Sobic001G252300 Sobic001G252300 Sobic002G421200--Sobic001G252300 Sobic002G312900 Sobic002G312900 Sobic002G421200--Sobic002G312900 Sobic005G084600 Sobic005G084600 Sobic002G421200--Sobic005G084600 Sobic003G117600 Sobic003G117600 Sobic002G421200--Sobic003G117600 Sobic007G141500 Sobic007G141500 Sobic002G421200--Sobic007G141500 Sobic004G166700 Sobic004G166700 Sobic002G421200--Sobic004G166700 Sobic001G070800 Sobic001G070800 Sobic002G421200--Sobic001G070800 Sobic007G087200 Sobic007G087200 Sobic002G421200--Sobic007G087200 Sobic005G101700 Sobic005G101700 Sobic001G185450--Sobic005G101700 Sobic006G010100 Sobic006G010100 Sobic001G185450--Sobic006G010100 Sobic001G330200 Sobic001G330200 Sobic001G185450--Sobic001G330200 Sobic001G185450--Sobic002G251000 Sobic005G101600 Sobic005G101600 Sobic001G185450--Sobic005G101600 Sobic002G139400 Sobic002G139400 Sobic001G185450--Sobic002G139400 Sobic001G330400 Sobic001G330400 Sobic001G185450--Sobic001G330400 Sobic001G330100 Sobic001G330100 Sobic001G185450--Sobic001G330100 Sobic001G318600 Sobic001G318600 Sobic001G185450--Sobic001G318600 Sobic003G340800--Sobic006G201400 Sobic001G012500 Sobic001G012500 Sobic003G340800--Sobic001G012500 Sobic003G031900 Sobic003G031900 Sobic003G340800--Sobic003G031900 Sobic004G099900 Sobic004G099900 Sobic003G340800--Sobic004G099900 Sobic006G074300 Sobic006G074300 Sobic003G340800--Sobic006G074300 Sobic001G012600 Sobic001G012600 Sobic003G340800--Sobic001G012600 Sobic002G379600 Sobic002G379600 Sobic003G340800--Sobic002G379600 Sobic003G340800--Sobic001G366100 Sobic005G116500 Sobic005G116500 Sobic003G340800--Sobic005G116500 Sobic003G254300 Sobic003G254300 Sobic006G201400--Sobic003G254300 Sobic004G024300 Sobic004G024300 Sobic006G201400--Sobic004G024300 Sobic004G220000 Sobic004G220000 Sobic006G201400--Sobic004G220000 Sobic006G201400--Sobic001G351000 Sobic002G073800 Sobic002G073800 Sobic006G201400--Sobic002G073800 Sobic009G212200 Sobic009G212200 Sobic006G201400--Sobic009G212200 Sobic003G306100 Sobic003G306100 Sobic006G201400--Sobic003G306100 Sobic001G304400 Sobic001G304400 Sobic006G201400--Sobic001G304400 Sobic001G432000 Sobic001G432000 Sobic006G201400--Sobic001G432000 Sobic006G153100 Sobic006G153100 Sobic005G179200--Sobic006G153100 Sobic005G179200--Sobic003G117600 Sobic005G206601 Sobic005G206601 Sobic005G179200--Sobic005G206601 Sobic005G179200--Sobic010G084700 Sobic001G444400 Sobic001G444400 Sobic005G179200--Sobic001G444400 Sobic005G063100 Sobic005G063100 Sobic005G179200--Sobic005G063100 Sobic004G071650 Sobic004G071650 Sobic005G179200--Sobic004G071650 Sobic005G051200 Sobic005G051200 Sobic005G179200--Sobic005G051200 Sobic005G179200--Sobic005G101700 Sobic004G243100 Sobic004G243100 Sobic002G251000--Sobic004G243100 Sobic001G318700 Sobic001G318700 Sobic002G251000--Sobic001G318700 Sobic002G251000--Sobic001G423800 Sobic001G231400 Sobic001G231400 Sobic002G251000--Sobic001G231400 Sobic001G018300 Sobic001G018300 Sobic002G251000--Sobic001G018300 Sobic001G192200 Sobic001G192200 Sobic002G251000--Sobic001G192200 Sobic002G251000--Sobic003G282901 Sobic002G140400 Sobic002G140400 Sobic002G251000--Sobic002G140400 Sobic002G251000--Sobic004G189400 Sobic004G065500 Sobic004G065500 Sobic001G351000--Sobic004G065500 Sobic001G351000--Sobic004G220000 Sobic004G171400 Sobic004G171400 Sobic001G351000--Sobic004G171400 Sobic001G459800 Sobic001G459800 Sobic001G351000--Sobic001G459800 Sobic006G267200 Sobic006G267200 Sobic001G351000--Sobic006G267200 Sobic009G141800 Sobic009G141800 Sobic001G351000--Sobic009G141800 Sobic003G393900 Sobic003G393900 Sobic001G351000--Sobic003G393900 Sobic005G113300 Sobic005G113300 Sobic001G351000--Sobic005G113300 Sobic003G228900 Sobic003G228900 Sobic001G351000--Sobic003G228900 Sobic010G084700--Sobic004G221500 Sobic010G084100 Sobic010G084100 Sobic010G084700--Sobic010G084100 Sobic010G117900 Sobic010G117900 Sobic010G084700--Sobic010G117900 Sobic002G184200 Sobic002G184200 Sobic010G084700--Sobic002G184200 Sobic010G084700--Sobic010G176600 Sobic003G286600 Sobic003G286600 Sobic010G084700--Sobic003G286600 Sobic001G348700 Sobic001G348700 Sobic010G084700--Sobic001G348700 Sobic010G084700--Sobic001G423800 Sobic010G084700--Sobic001G192200
Octagon: transcription factors


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