Gene annotation
Transcriptome id Sobic.001G367800.2,Sobic.001G367800.3
Synonym Sb01g035030, FIS1A, BIGYIN
Functional annotation tetratricopeptide repeat containing protein, putative, expressed
UniProt A0A1Z5S9I5 , A0A1Z5S9S9
Pfam PF14852 PF14853
Panther DB PTHR13247 PTHR13247:SF2
NCBI CDD KOG3364; Membrane protein involved in organellar division
KEGG Orthology K17969; FIS1, TTC11, mitochondrial fission 1 protein
Gene Ontology GO:0000266; mitochondrial fission


Orthologs (automatic annotation)
TAIR AT3G57090 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os03g24060.1 : tetratricopeptide repeat containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a052348
Brachypodium KQK06515
Barley HORVU1Hr1G057170.22 , HORVU1Hr1G057170.23
Wheat TraesCS1B02G252000 , TraesCS1D02G240000 , TraesCS1A02G239800
Populus -


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cDNA sequences
Sobic.001G367800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G435800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-binding EF hand family protein, putative, expressed -
2 Sobic.009G072400 ABC transporter, ATP-binding protein, putative, expressed -
3 Sobic.008G096900 protein of unknown function DUF502 domain containing protein, expressed -
4 Sobic.002G252700 vignain precursor, putative, expressed -
5 Sobic.001G068901 - -
6 Sobic.002G118400 - -
7 Sobic.010G021401 - -
8 Sobic.010G242100 cytochrome P450 domain containing protein, expressed -
9 Sobic.009G114900 - -
10 Sobic.010G253700 - -
11 Sobic.010G197400 tetratricopeptide-like helical, putative, expressed -
12 Sobic.001G308450 - -
13 Sobic.010G220100 cell cycle control protein, putative, expressed -
14 Sobic.001G537600 expressed protein -
15 Sobic.005G145700 - -
16 Sobic.001G344450 - K02998: RP-SAe, small subunit ribosomal protein SAe
17 Sobic.003G159400 - -
18 Sobic.002G314950 - -
19 Sobic.009G039300 short-chain dehydrogenase/reductase, putative, expressed -
20 Sobic.008G108200 receptor-like protein kinase 5 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G367800 Sobic001G367800 Sobic001G435800 Sobic001G435800 Sobic001G367800--Sobic001G435800 Sobic009G072400 Sobic009G072400 Sobic001G367800--Sobic009G072400 Sobic008G096900 Sobic008G096900 Sobic001G367800--Sobic008G096900 Sobic002G252700 Sobic002G252700 Sobic001G367800--Sobic002G252700 Sobic001G068901 Sobic001G068901 Sobic001G367800--Sobic001G068901 Sobic002G118400 Sobic002G118400 Sobic001G367800--Sobic002G118400 Sobic010G021401 Sobic010G021401 Sobic001G367800--Sobic010G021401 Sobic010G242100 Sobic010G242100 Sobic001G367800--Sobic010G242100 Sobic009G114900 Sobic009G114900 Sobic001G367800--Sobic009G114900 Sobic001G435800--Sobic010G021401 Sobic001G435800--Sobic009G072400 Sobic001G435800--Sobic009G114900 Sobic005G155001 Sobic005G155001 Sobic001G435800--Sobic005G155001 Sobic002G314950 Sobic002G314950 Sobic001G435800--Sobic002G314950 Sobic001G435800--Sobic008G096900 Sobic008G185000 Sobic008G185000 Sobic001G435800--Sobic008G185000 Sobic010G257300 Sobic010G257300 Sobic001G435800--Sobic010G257300 Sobic010G220100 Sobic010G220100 Sobic001G435800--Sobic010G220100 Sobic009G072400--Sobic001G068901 Sobic009G072400--Sobic010G257300 Sobic006G093400 Sobic006G093400 Sobic009G072400--Sobic006G093400 Sobic004G012100 Sobic004G012100 Sobic009G072400--Sobic004G012100 Sobic001G537600 Sobic001G537600 Sobic009G072400--Sobic001G537600 Sobic009G072400--Sobic010G242100 Sobic009G072400--Sobic008G096900 Sobic010G253700 Sobic010G253700 Sobic009G072400--Sobic010G253700 Sobic009G072400--Sobic001G435800 Sobic006G037000 Sobic006G037000 Sobic008G096900--Sobic006G037000 Sobic007G174100 Sobic007G174100 Sobic008G096900--Sobic007G174100 Sobic008G096900--Sobic010G257300 Sobic008G096900--Sobic001G537600 Sobic005G076100 Sobic005G076100 Sobic008G096900--Sobic005G076100 Sobic008G096900--Sobic004G012100 Sobic008G096900--Sobic010G253700 Sobic009G031300 Sobic009G031300 Sobic008G096900--Sobic009G031300 Sobic002G326200 Sobic002G326200 Sobic008G096900--Sobic002G326200 Sobic002G252700--Sobic009G114900 Sobic002G252700--Sobic010G021401 Sobic002G252700--Sobic006G093400 Sobic002G252700--Sobic005G155001 Sobic002G252700--Sobic008G185000 Sobic008G192800 Sobic008G192800 Sobic002G252700--Sobic008G192800 Sobic009G004500 Sobic009G004500 Sobic002G252700--Sobic009G004500 Sobic002G252700--Sobic008G096900 Sobic002G252700--Sobic010G257300 Sobic001G068901--Sobic001G537600 Sobic001G068901--Sobic010G242100 Sobic001G068901--Sobic006G093400 Sobic001G068901--Sobic009G072400 Sobic001G068901--Sobic010G257300 Sobic001G068901--Sobic010G253700 Sobic001G068901--Sobic004G012100 Sobic010G106400 Sobic010G106400 Sobic001G068901--Sobic010G106400 Sobic001G308450 Sobic001G308450 Sobic001G068901--Sobic001G308450 Sobic001G061000 Sobic001G061000 Sobic002G118400--Sobic001G061000 Sobic004G045200 Sobic004G045200 Sobic002G118400--Sobic004G045200 Sobic002G118400--Sobic002G314950 Sobic001G033200 Sobic001G033200 Sobic002G118400--Sobic001G033200 Sobic007G200200 Sobic007G200200 Sobic002G118400--Sobic007G200200 Sobic006G269300 Sobic006G269300 Sobic002G118400--Sobic006G269300 Sobic002G320700 Sobic002G320700 Sobic002G118400--Sobic002G320700 Sobic001G456650 Sobic001G456650 Sobic002G118400--Sobic001G456650 Sobic004G203600 Sobic004G203600 Sobic002G118400--Sobic004G203600 Sobic010G021401--Sobic005G155001 Sobic010G021401--Sobic009G114900 Sobic010G021401--Sobic009G004500 Sobic001G483200 Sobic001G483200 Sobic010G021401--Sobic001G483200 Sobic001G527900 Sobic001G527900 Sobic010G021401--Sobic001G527900 Sobic007G090406 Sobic007G090406 Sobic010G021401--Sobic007G090406 Sobic010G021401--Sobic002G252700 Sobic010G021401--Sobic008G185000 Sobic010G021401--Sobic008G192800 Sobic010G242100--Sobic001G068901 Sobic010G242100--Sobic010G253700 Sobic010G242100--Sobic004G012100 Sobic010G242100--Sobic001G537600 Sobic010G197400 Sobic010G197400 Sobic010G242100--Sobic010G197400 Sobic010G242100--Sobic010G257300 Sobic010G242100--Sobic009G072400 Sobic010G242100--Sobic010G106400 Sobic009G225300 Sobic009G225300 Sobic010G242100--Sobic009G225300 Sobic009G114900--Sobic005G155001 Sobic009G114900--Sobic010G021401 Sobic009G114900--Sobic007G090406 Sobic009G114900--Sobic002G252700 Sobic009G114900--Sobic009G004500 Sobic009G114900--Sobic006G093400 Sobic009G114900--Sobic008G192800 Sobic009G114900--Sobic001G527900 Sobic009G114900--Sobic001G483200
Octagon: transcription factors


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