Gene annotation
Transcriptome id Sobic.008G108200.3
Synonym Sb08g016290
Functional annotation receptor-like protein kinase 5 precursor, putative, expressed
UniProt A0A1Z5R640
Pfam PF00560 PF08263 PF07714 PF13855
Panther DB PTHR27000 PTHR27000:SF82
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G47570 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os11g07230.2 : receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a031969
Brachypodium PNT69063
Barley HORVU6Hr1G008930.4 , HORVU6Hr1G008930.3
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G045200 phytosulfokine receptor precursor, putative, expressed -
2 Sobic.005G145700 - -
3 Sobic.001G367800 tetratricopeptide repeat containing protein, putative, expressed K17969: FIS1, TTC11, mitochondrial fission 1 protein
4 Sobic.009G182000 cysteine proteinase inhibitor precursor protein, putative, expressed -
5 Sobic.003G259000 - -
6 Sobic.004G179000 chalcone synthase, putative, expressed -
7 Sobic.001G435800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-binding EF hand family protein, putative, expressed -
8 Sobic.010G021401 - -
9 Sobic.003G040500 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K03004: DNA-directed RNA polymerase I subunit RPA43
10 Sobic.002G118400 - -
11 Sobic.002G370100 proline-rich protein, putative, expressed -
12 Sobic.010G002500 integral membrane protein, putative, expressed -
13 Sobic.002G314950 - -
14 Sobic.003G178400 - -
15 Sobic.003G279600 - -
16 Sobic.001G501500 DUF584 domain containing protein, putative, expressed -
17 Sobic.008G096900 protein of unknown function DUF502 domain containing protein, expressed -
18 Sobic.009G039300 short-chain dehydrogenase/reductase, putative, expressed -
19 Sobic.003G159400 - -
20 Sobic.001G061000 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G108200 Sobic008G108200 Sobic004G045200 Sobic004G045200 Sobic008G108200--Sobic004G045200 Sobic005G145700 Sobic005G145700 Sobic008G108200--Sobic005G145700 Sobic001G367800 Sobic001G367800 Sobic008G108200--Sobic001G367800 Sobic009G182000 Sobic009G182000 Sobic008G108200--Sobic009G182000 Sobic003G259000 Sobic003G259000 Sobic008G108200--Sobic003G259000 Sobic004G179000 Sobic004G179000 Sobic008G108200--Sobic004G179000 Sobic001G435800 Sobic001G435800 Sobic008G108200--Sobic001G435800 Sobic010G021401 Sobic010G021401 Sobic008G108200--Sobic010G021401 Sobic003G040500 Sobic003G040500 Sobic008G108200--Sobic003G040500 Sobic001G061000 Sobic001G061000 Sobic004G045200--Sobic001G061000 Sobic002G118400 Sobic002G118400 Sobic004G045200--Sobic002G118400 Sobic007G200200 Sobic007G200200 Sobic004G045200--Sobic007G200200 Sobic002G314950 Sobic002G314950 Sobic004G045200--Sobic002G314950 Sobic004G203600 Sobic004G203600 Sobic004G045200--Sobic004G203600 Sobic001G033200 Sobic001G033200 Sobic004G045200--Sobic001G033200 Sobic004G045200--Sobic009G182000 Sobic001G456650 Sobic001G456650 Sobic004G045200--Sobic001G456650 Sobic001G361750 Sobic001G361750 Sobic004G045200--Sobic001G361750 Sobic005G145700--Sobic010G021401 Sobic009G004500 Sobic009G004500 Sobic005G145700--Sobic009G004500 Sobic003G159400 Sobic003G159400 Sobic005G145700--Sobic003G159400 Sobic009G114900 Sobic009G114900 Sobic005G145700--Sobic009G114900 Sobic006G260101 Sobic006G260101 Sobic005G145700--Sobic006G260101 Sobic010G278400 Sobic010G278400 Sobic005G145700--Sobic010G278400 Sobic005G145700--Sobic001G435800 Sobic002G252700 Sobic002G252700 Sobic005G145700--Sobic002G252700 Sobic008G096900 Sobic008G096900 Sobic005G145700--Sobic008G096900 Sobic001G367800--Sobic001G435800 Sobic009G072400 Sobic009G072400 Sobic001G367800--Sobic009G072400 Sobic001G367800--Sobic008G096900 Sobic001G367800--Sobic002G252700 Sobic001G068901 Sobic001G068901 Sobic001G367800--Sobic001G068901 Sobic001G367800--Sobic002G118400 Sobic001G367800--Sobic010G021401 Sobic010G242100 Sobic010G242100 Sobic001G367800--Sobic010G242100 Sobic001G367800--Sobic009G114900 Sobic007G200300 Sobic007G200300 Sobic009G182000--Sobic007G200300 Sobic009G182000--Sobic004G045200 Sobic002G320700 Sobic002G320700 Sobic009G182000--Sobic002G320700 Sobic004G149000 Sobic004G149000 Sobic009G182000--Sobic004G149000 Sobic009G182000--Sobic003G259000 Sobic009G182000--Sobic004G203600 Sobic009G182000--Sobic001G033200 Sobic009G199900 Sobic009G199900 Sobic009G182000--Sobic009G199900 Sobic006G169600 Sobic006G169600 Sobic009G182000--Sobic006G169600 Sobic001G309000 Sobic001G309000 Sobic003G259000--Sobic001G309000 Sobic003G005332 Sobic003G005332 Sobic003G259000--Sobic003G005332 Sobic003G279600 Sobic003G279600 Sobic003G259000--Sobic003G279600 Sobic008G007100 Sobic008G007100 Sobic003G259000--Sobic008G007100 Sobic003G178400 Sobic003G178400 Sobic003G259000--Sobic003G178400 Sobic001G027400 Sobic001G027400 Sobic003G259000--Sobic001G027400 Sobic003G259000--Sobic007G200300 Sobic009G242032 Sobic009G242032 Sobic003G259000--Sobic009G242032 Sobic010G097800 Sobic010G097800 Sobic003G259000--Sobic010G097800 Sobic001G501500 Sobic001G501500 Sobic004G179000--Sobic001G501500 Sobic005G077532 Sobic005G077532 Sobic004G179000--Sobic005G077532 Sobic010G009532 Sobic010G009532 Sobic004G179000--Sobic010G009532 Sobic004G230500 Sobic004G230500 Sobic004G179000--Sobic004G230500 Sobic006G165900 Sobic006G165900 Sobic004G179000--Sobic006G165900 Sobic001G176800 Sobic001G176800 Sobic004G179000--Sobic001G176800 Sobic008G152100 Sobic008G152100 Sobic004G179000--Sobic008G152100 Sobic004G179000--Sobic010G097800 Sobic007G157200 Sobic007G157200 Sobic004G179000--Sobic007G157200 Sobic001G435800--Sobic010G021401 Sobic001G435800--Sobic009G072400 Sobic001G435800--Sobic009G114900 Sobic005G155001 Sobic005G155001 Sobic001G435800--Sobic005G155001 Sobic001G435800--Sobic002G314950 Sobic001G435800--Sobic008G096900 Sobic008G185000 Sobic008G185000 Sobic001G435800--Sobic008G185000 Sobic010G257300 Sobic010G257300 Sobic001G435800--Sobic010G257300 Sobic010G220100 Sobic010G220100 Sobic001G435800--Sobic010G220100 Sobic010G021401--Sobic005G155001 Sobic010G021401--Sobic009G114900 Sobic010G021401--Sobic009G004500 Sobic001G483200 Sobic001G483200 Sobic010G021401--Sobic001G483200 Sobic001G527900 Sobic001G527900 Sobic010G021401--Sobic001G527900 Sobic007G090406 Sobic007G090406 Sobic010G021401--Sobic007G090406 Sobic010G021401--Sobic002G252700 Sobic010G021401--Sobic008G185000 Sobic008G192800 Sobic008G192800 Sobic010G021401--Sobic008G192800 Sobic002G370100 Sobic002G370100 Sobic003G040500--Sobic002G370100 Sobic003G040500--Sobic001G309000 Sobic003G149900 Sobic003G149900 Sobic003G040500--Sobic003G149900 Sobic006G037000 Sobic006G037000 Sobic003G040500--Sobic006G037000 Sobic003G040500--Sobic003G279600 Sobic002G326200 Sobic002G326200 Sobic003G040500--Sobic002G326200 Sobic001G523300 Sobic001G523300 Sobic003G040500--Sobic001G523300 Sobic010G155901 Sobic010G155901 Sobic003G040500--Sobic010G155901 Sobic006G110600 Sobic006G110600 Sobic003G040500--Sobic006G110600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.