Gene annotation
Transcriptome id Sobic.001G380200.3,Sobic.001G380200.1,Sobic.001G380200.2
Synonym Sb01g036080
Functional annotation nucleotidyltransferase, putative, expressed
UniProt C5X0S7 , A0A1B6QNC0 , A0A1Z5S9X7
Pfam -
Panther DB PTHR23092 PTHR23092:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G51620 : PAP/OAS1 substrate-binding domain superfamily
RAP-DB (Rice) LOC_Os03g21850.1 : nucleotidyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a002355 , Zm00025a015442 , Zm00025a049155
Brachypodium KQK21790 , KQK21791
Barley HORVU4Hr1G049990.17 , HORVU4Hr1G049990.16 , HORVU4Hr1G049990.15 , HORVU4Hr1G049990.14 , HORVU4Hr1G049990.13 , HORVU4Hr1G049990.12 , HORVU4Hr1G049990.11 , HORVU4Hr1G049990.10 , HORVU4Hr1G049990.19 , HORVU4Hr1G049990.18 , HORVU4Hr1G049990.24 , HORVU4Hr1G049990.22 , HORVU4Hr1G049990.23 , HORVU4Hr1G049990.20 , HORVU4Hr1G049990.21 , HORVU4Hr1G049990.9 , HORVU4Hr1G049990.8 , HORVU4Hr1G049990.7 , HORVU4Hr1G049990.6 , HORVU4Hr1G049990.5 , HORVU4Hr1G049990.4 , HORVU4Hr1G049990.3 , HORVU4Hr1G049990.2 , HORVU4Hr1G049990.1 , HORVU4Hr1G049990.25
Wheat TraesCS4D02G171200 , TraesCS4A02G136000 , TraesCS4B02G168900 , TraesCS4B02G168900 , TraesCS4B02G168900
Populus -


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cDNA sequences
Sobic.001G380200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G026900 - -
2 Sobic.001G478700 THION26 - Plant thionin family protein precursor, expressed -
3 Sobic.002G066901 - -
4 Sobic.001G432100 expressed protein -
5 Sobic.005G067400 - -
6 Sobic.010G109300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@acylphosphatase, putative, expressed K01512: acylphosphatase
7 Sobic.010G079800 expressed protein -
8 Sobic.003G071901 - -
9 Sobic.002G354800 zinc finger family protein, putative, expressed -
10 Sobic.007G010200 - -
11 Sobic.004G229000 RNA recognition motif containing protein, putative, expressed K14396: PABPN1, polyadenylate-binding protein 2
12 Sobic.001G188700 OST3/OST6 family protein, putative, expressed K12669: OST3, oligosaccharyltransferase complex subunit gamma
13 Sobic.002G315100 expressed protein K15083: DNA repair protein RAD16
14 Sobic.008G051400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@GATA zinc finger domain containing protein, expressed -
15 Sobic.003G284700 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
16 Sobic.005G044100 harpin-induced protein 1 domain containing protein, expressed -
17 Sobic.004G340566 - -
18 Sobic.008G168700 OsFBX320 - F-box domain containing protein, expressed -
19 Sobic.002G335500 OsFBX255 - F-box domain containing protein, expressed -
20 Sobic.002G238800 mago nashi, putative, expressed K12877: protein mago nashi


Gene co-expression network
sample Sobic001G380200 Sobic001G380200 Sobic007G026900 Sobic007G026900 Sobic001G380200--Sobic007G026900 Sobic001G478700 Sobic001G478700 Sobic001G380200--Sobic001G478700 Sobic002G066901 Sobic002G066901 Sobic001G380200--Sobic002G066901 Sobic001G432100 Sobic001G432100 Sobic001G380200--Sobic001G432100 Sobic005G067400 Sobic005G067400 Sobic001G380200--Sobic005G067400 Sobic010G109300 Sobic010G109300 Sobic001G380200--Sobic010G109300 Sobic010G079800 Sobic010G079800 Sobic001G380200--Sobic010G079800 Sobic003G071901 Sobic003G071901 Sobic001G380200--Sobic003G071901 Sobic002G354800 Sobic002G354800 Sobic001G380200--Sobic002G354800 Sobic007G026900--Sobic010G109300 Sobic007G026900--Sobic003G071901 Sobic005G127900 Sobic005G127900 Sobic007G026900--Sobic005G127900 Sobic003G055200 Sobic003G055200 Sobic007G026900--Sobic003G055200 Sobic007G026900--Sobic001G380200 Sobic002G315100 Sobic002G315100 Sobic007G026900--Sobic002G315100 Sobic002G230400 Sobic002G230400 Sobic007G026900--Sobic002G230400 Sobic007G026900--Sobic002G354800 Sobic006G046300 Sobic006G046300 Sobic007G026900--Sobic006G046300 Sobic001G353501 Sobic001G353501 Sobic001G478700--Sobic001G353501 Sobic009G232500 Sobic009G232500 Sobic001G478700--Sobic009G232500 Sobic003G410200 Sobic003G410200 Sobic001G478700--Sobic003G410200 Sobic001G478700--Sobic010G079800 Sobic006G004300 Sobic006G004300 Sobic001G478700--Sobic006G004300 Sobic005G044100 Sobic005G044100 Sobic001G478700--Sobic005G044100 Sobic007G031100 Sobic007G031100 Sobic001G478700--Sobic007G031100 Sobic007G140500 Sobic007G140500 Sobic001G478700--Sobic007G140500 Sobic010G067200 Sobic010G067200 Sobic001G478700--Sobic010G067200 Sobic006G245000 Sobic006G245000 Sobic002G066901--Sobic006G245000 Sobic001G267000 Sobic001G267000 Sobic002G066901--Sobic001G267000 Sobic009G070300 Sobic009G070300 Sobic002G066901--Sobic009G070300 Sobic005G117200 Sobic005G117200 Sobic002G066901--Sobic005G117200 Sobic005G115400 Sobic005G115400 Sobic002G066901--Sobic005G115400 Sobic002G066901--Sobic005G127900 Sobic002G066901--Sobic010G079800 Sobic002G066901--Sobic001G380200 Sobic005G159801 Sobic005G159801 Sobic002G066901--Sobic005G159801 Sobic009G218000 Sobic009G218000 Sobic001G432100--Sobic009G218000 Sobic007G010200 Sobic007G010200 Sobic001G432100--Sobic007G010200 Sobic001G432100--Sobic007G031100 Sobic007G036800 Sobic007G036800 Sobic001G432100--Sobic007G036800 Sobic004G145600 Sobic004G145600 Sobic001G432100--Sobic004G145600 Sobic002G280900 Sobic002G280900 Sobic001G432100--Sobic002G280900 Sobic010G018900 Sobic010G018900 Sobic001G432100--Sobic010G018900 Sobic004G229000 Sobic004G229000 Sobic001G432100--Sobic004G229000 Sobic004G354100 Sobic004G354100 Sobic001G432100--Sobic004G354100 Sobic008G168700 Sobic008G168700 Sobic005G067400--Sobic008G168700 Sobic005G067400--Sobic007G010200 Sobic001G538100 Sobic001G538100 Sobic005G067400--Sobic001G538100 Sobic005G067400--Sobic005G127900 Sobic005G067400--Sobic005G115400 Sobic005G166000 Sobic005G166000 Sobic005G067400--Sobic005G166000 Sobic002G175400 Sobic002G175400 Sobic005G067400--Sobic002G175400 Sobic002G220200 Sobic002G220200 Sobic005G067400--Sobic002G220200 Sobic009G085300 Sobic009G085300 Sobic005G067400--Sobic009G085300 Sobic008G160600 Sobic008G160600 Sobic010G109300--Sobic008G160600 Sobic003G042200 Sobic003G042200 Sobic010G109300--Sobic003G042200 Sobic010G009600 Sobic010G009600 Sobic010G109300--Sobic010G009600 Sobic001G194100 Sobic001G194100 Sobic010G109300--Sobic001G194100 Sobic010G109300--Sobic002G354800 Sobic005G041900 Sobic005G041900 Sobic010G109300--Sobic005G041900 Sobic006G184200 Sobic006G184200 Sobic010G109300--Sobic006G184200 Sobic010G109300--Sobic002G230400 Sobic010G109300--Sobic003G055200 Sobic001G239100 Sobic001G239100 Sobic010G079800--Sobic001G239100 Sobic007G050300 Sobic007G050300 Sobic010G079800--Sobic007G050300 Sobic001G136500 Sobic001G136500 Sobic010G079800--Sobic001G136500 Sobic004G146200 Sobic004G146200 Sobic010G079800--Sobic004G146200 Sobic007G153700 Sobic007G153700 Sobic010G079800--Sobic007G153700 Sobic010G079800--Sobic007G031100 Sobic010G079800--Sobic001G478700 Sobic004G206300 Sobic004G206300 Sobic010G079800--Sobic004G206300 Sobic001G188700 Sobic001G188700 Sobic010G079800--Sobic001G188700 Sobic010G152000 Sobic010G152000 Sobic003G071901--Sobic010G152000 Sobic007G192200 Sobic007G192200 Sobic003G071901--Sobic007G192200 Sobic005G036200 Sobic005G036200 Sobic003G071901--Sobic005G036200 Sobic002G420400 Sobic002G420400 Sobic003G071901--Sobic002G420400 Sobic003G071901--Sobic007G026900 Sobic003G379900 Sobic003G379900 Sobic003G071901--Sobic003G379900 Sobic001G273000 Sobic001G273000 Sobic003G071901--Sobic001G273000 Sobic010G087100 Sobic010G087100 Sobic003G071901--Sobic010G087100 Sobic002G240500 Sobic002G240500 Sobic003G071901--Sobic002G240500 Sobic002G354800--Sobic002G230400 Sobic002G354800--Sobic002G315100 Sobic002G354800--Sobic006G184200 Sobic002G349000 Sobic002G349000 Sobic002G354800--Sobic002G349000 Sobic001G081800 Sobic001G081800 Sobic002G354800--Sobic001G081800 Sobic004G014100 Sobic004G014100 Sobic002G354800--Sobic004G014100 Sobic006G143300 Sobic006G143300 Sobic002G354800--Sobic006G143300 Sobic002G354800--Sobic003G055200 Sobic001G278700 Sobic001G278700 Sobic002G354800--Sobic001G278700
Octagon: transcription factors


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