Gene annotation
Transcriptome id Sobic.001G389500.2,Sobic.001G389500.1,Sobic.001G389500.3
Synonym Sb01g036920
Functional annotation guanylate kinase, putative, expressed
UniProt A0A1B6QNK3 , A0A1Z5S9S4 , A0A1B6QNI7
Pfam PF00625
Panther DB PTHR23117 PTHR23117:SF12
NCBI CDD KOG0707; Guanylate kinase
KEGG Orthology K00942; E2.7.4.8, guanylate kinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G06200 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os03g20460.1 : guanylate kinase, putative, expressed
MaizeGDB (Corn) Zm00025a002240
Brachypodium KQK21921
Barley HORVU4Hr1G052090.2 , HORVU4Hr1G052090.3 , HORVU4Hr1G052090.1 , HORVU4Hr1G052090.5 , HORVU4Hr1G052090.4
Wheat TraesCS4B02G177300 , TraesCS4A02G127400
Populus -


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cDNA sequences
Sobic.001G389500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G022000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
2 Sobic.002G363500 RNA methyltransferase, TrmH family protein, putative, expressed -
3 Sobic.001G099800 nucleic acid binding protein, putative, expressed -
4 Sobic.002G190800 expressed protein -
5 Sobic.001G172300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@kinase, pfkB family, putative, expressed -
6 Sobic.007G026200 heat shock protein DnaJ, putative, expressed -
7 Sobic.001G395300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsClp4 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
8 Sobic.010G012900 superoxide dismutase, chloroplast, putative, expressed K04564: superoxide dismutase, Fe-Mn family
9 Sobic.003G425100 "Protein OSB3, chloroplastic/mitochondrial"(PubMedID : 24906815)@single-stranded DNA-binding protein, putative, expressed -
10 Sobic.001G347800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Homologous to Arabidopsis heme oxygenase 1 (AtHO1)(PubMedID : 11402195)@heme oxygenase 2, putative, expressed -
11 Sobic.002G428900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MRH1, putative, expressed -
12 Sobic.008G107800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SWIB/MDM2 domain containing protein, expressed -
13 Sobic.008G118600 riboflavin synthase alpha chain, putative, expressed K00793: ribE, riboflavin synthase
14 Sobic.009G151400 "Capable of trans-activating SbMATE promoter alleles harboring one, four, and five copies of the MITE repeats "(PubMedID : 30545913)@zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
15 Sobic.002G360200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
16 Sobic.002G333100 transmembrane protein, putative, expressed -
17 Sobic.009G210100 EMB1796, putative, expressed -
18 Sobic.001G437200 ATP-dependent Clp protease ATP-binding subunit, putative, expressed -
19 Sobic.003G273300 single myb histone, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.007G172600 dihydroneopterin aldolase, putative, expressed K01633: 7,8-dihydroneopterin aldolase/epimerase/oxygenase


Gene co-expression network
sample Sobic001G389500 Sobic001G389500 Sobic005G022000 Sobic005G022000 Sobic001G389500--Sobic005G022000 Sobic002G363500 Sobic002G363500 Sobic001G389500--Sobic002G363500 Sobic001G099800 Sobic001G099800 Sobic001G389500--Sobic001G099800 Sobic002G190800 Sobic002G190800 Sobic001G389500--Sobic002G190800 Sobic001G172300 Sobic001G172300 Sobic001G389500--Sobic001G172300 Sobic007G026200 Sobic007G026200 Sobic001G389500--Sobic007G026200 Sobic001G395300 Sobic001G395300 Sobic001G389500--Sobic001G395300 Sobic010G012900 Sobic010G012900 Sobic001G389500--Sobic010G012900 Sobic003G425100 Sobic003G425100 Sobic001G389500--Sobic003G425100 Sobic002G078000 Sobic002G078000 Sobic005G022000--Sobic002G078000 Sobic001G104300 Sobic001G104300 Sobic005G022000--Sobic001G104300 Sobic005G022000--Sobic002G363500 Sobic006G281066 Sobic006G281066 Sobic005G022000--Sobic006G281066 Sobic006G114300 Sobic006G114300 Sobic005G022000--Sobic006G114300 Sobic005G022000--Sobic007G026200 Sobic002G360200 Sobic002G360200 Sobic005G022000--Sobic002G360200 Sobic007G166600 Sobic007G166600 Sobic005G022000--Sobic007G166600 Sobic005G022000--Sobic001G389500 Sobic002G363500--Sobic006G281066 Sobic002G363500--Sobic005G022000 Sobic002G363500--Sobic001G395300 Sobic001G437200 Sobic001G437200 Sobic002G363500--Sobic001G437200 Sobic002G363500--Sobic001G104300 Sobic003G298400 Sobic003G298400 Sobic002G363500--Sobic003G298400 Sobic010G134500 Sobic010G134500 Sobic002G363500--Sobic010G134500 Sobic003G165800 Sobic003G165800 Sobic002G363500--Sobic003G165800 Sobic006G237100 Sobic006G237100 Sobic002G363500--Sobic006G237100 Sobic003G058900 Sobic003G058900 Sobic001G099800--Sobic003G058900 Sobic001G136500 Sobic001G136500 Sobic001G099800--Sobic001G136500 Sobic001G132900 Sobic001G132900 Sobic001G099800--Sobic001G132900 Sobic001G280400 Sobic001G280400 Sobic001G099800--Sobic001G280400 Sobic004G206300 Sobic004G206300 Sobic001G099800--Sobic004G206300 Sobic008G008300 Sobic008G008300 Sobic001G099800--Sobic008G008300 Sobic008G125000 Sobic008G125000 Sobic001G099800--Sobic008G125000 Sobic004G117800 Sobic004G117800 Sobic001G099800--Sobic004G117800 Sobic008G051100 Sobic008G051100 Sobic001G099800--Sobic008G051100 Sobic004G044000 Sobic004G044000 Sobic002G190800--Sobic004G044000 Sobic002G190800--Sobic010G012900 Sobic002G190800--Sobic001G172300 Sobic007G034500 Sobic007G034500 Sobic002G190800--Sobic007G034500 Sobic001G383900 Sobic001G383900 Sobic002G190800--Sobic001G383900 Sobic003G392000 Sobic003G392000 Sobic002G190800--Sobic003G392000 Sobic001G120000 Sobic001G120000 Sobic002G190800--Sobic001G120000 Sobic001G357200 Sobic001G357200 Sobic002G190800--Sobic001G357200 Sobic001G188600 Sobic001G188600 Sobic002G190800--Sobic001G188600 Sobic001G172300--Sobic010G012900 Sobic001G347800 Sobic001G347800 Sobic001G172300--Sobic001G347800 Sobic001G172300--Sobic003G392000 Sobic001G172300--Sobic001G188600 Sobic001G172300--Sobic002G190800 Sobic001G172300--Sobic006G114300 Sobic001G172300--Sobic002G360200 Sobic001G172300--Sobic001G357200 Sobic004G253800 Sobic004G253800 Sobic001G172300--Sobic004G253800 Sobic001G069500 Sobic001G069500 Sobic007G026200--Sobic001G069500 Sobic007G211100 Sobic007G211100 Sobic007G026200--Sobic007G211100 Sobic007G026200--Sobic001G188600 Sobic004G109000 Sobic004G109000 Sobic007G026200--Sobic004G109000 Sobic002G189600 Sobic002G189600 Sobic007G026200--Sobic002G189600 Sobic007G026200--Sobic006G281066 Sobic007G026200--Sobic010G012900 Sobic007G026200--Sobic001G357200 Sobic004G296800 Sobic004G296800 Sobic007G026200--Sobic004G296800 Sobic009G137000 Sobic009G137000 Sobic001G395300--Sobic009G137000 Sobic002G404900 Sobic002G404900 Sobic001G395300--Sobic002G404900 Sobic001G228300 Sobic001G228300 Sobic001G395300--Sobic001G228300 Sobic001G395300--Sobic006G237100 Sobic006G263800 Sobic006G263800 Sobic001G395300--Sobic006G263800 Sobic002G140000 Sobic002G140000 Sobic001G395300--Sobic002G140000 Sobic006G204100 Sobic006G204100 Sobic001G395300--Sobic006G204100 Sobic007G116100 Sobic007G116100 Sobic001G395300--Sobic007G116100 Sobic010G027200 Sobic010G027200 Sobic001G395300--Sobic010G027200 Sobic010G012900--Sobic001G188600 Sobic010G012900--Sobic001G357200 Sobic010G011200 Sobic010G011200 Sobic010G012900--Sobic010G011200 Sobic010G012900--Sobic001G383900 Sobic010G012900--Sobic001G172300 Sobic010G012900--Sobic007G034500 Sobic003G383500 Sobic003G383500 Sobic010G012900--Sobic003G383500 Sobic010G012900--Sobic006G114300 Sobic009G098100 Sobic009G098100 Sobic010G012900--Sobic009G098100 Sobic009G163600 Sobic009G163600 Sobic003G425100--Sobic009G163600 Sobic005G028100 Sobic005G028100 Sobic003G425100--Sobic005G028100 Sobic004G027300 Sobic004G027300 Sobic003G425100--Sobic004G027300 Sobic006G225400 Sobic006G225400 Sobic003G425100--Sobic006G225400 Sobic010G224700 Sobic010G224700 Sobic003G425100--Sobic010G224700 Sobic009G071700 Sobic009G071700 Sobic003G425100--Sobic009G071700 Sobic003G436600 Sobic003G436600 Sobic003G425100--Sobic003G436600 Sobic006G198600 Sobic006G198600 Sobic003G425100--Sobic006G198600 Sobic004G036700 Sobic004G036700 Sobic003G425100--Sobic004G036700
Octagon: transcription factors


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