Gene annotation
Transcriptome id Sobic.001G395700.1
Synonym TBL6, Sb01g037460
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
proteins of unknown function domain containing protein, expressed
UniProt A0A1Z5S9X3
Pfam PF14416 PF13839
Panther DB PTHR32285 PTHR32285:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G62390 : TRICHOME BIREFRINGENCE-LIKE 6
RAP-DB (Rice) LOC_Os03g19470.1 : proteins of unknown function domain containing protein, expressed
MaizeGDB (Corn) Zm00025a052557 , Zm00025a033050
Brachypodium -
Barley HORVU4Hr1G053760.7 , HORVU4Hr1G053760.6 , HORVU4Hr1G053760.5 , HORVU4Hr1G053760.4 , HORVU4Hr1G053760.3 , HORVU4Hr1G053760.2 , HORVU4Hr1G053760.1 , HORVU4Hr1G053760.9 , HORVU4Hr1G053760.8 , HORVU4Hr1G053760.15 , HORVU4Hr1G053760.14 , HORVU4Hr1G053760.13 , HORVU4Hr1G053760.12 , HORVU4Hr1G053760.11 , HORVU4Hr1G053760.10
Wheat TraesCS4D02G184700 , TraesCS4D02G184700 , TraesCS6D02G303000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G058500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FAD-linked oxidoreductase protein, putative, expressed K18204: D-2-hydroxyglutarate dehydrogenase
2 Sobic.003G012300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K15109: SLC25A20_29, CACT, CACL, solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29
3 Sobic.002G215700 similar to Aldehyde dehydrogenase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Aldehyde dehydrogenase B4(PubMedID : 26320239)@Zinc finger(C3H4-type Ring finger) family protein(PubMedID : 26320239)@a glutamate S-semialdehyde dehydrogenase(PubMedID : 26320239)@aldehyde dehydrogenase, putative, expressed K14085: aldehyde dehydrogenase family 7 member A1
4 Sobic.006G139000 carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed -
5 Sobic.001G227800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
6 Sobic.002G195000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@proline-rich protein 6, putative, expressed -
7 Sobic.004G101900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@citrate synthase, putative, expressed K01647: CS, citrate synthase
8 Sobic.005G231900 mitochondrial carrier protein, putative, expressed K15103: UCP2_3, solute carrier family 25 (mitochondrial uncoupling protein), member 8/9
9 Sobic.003G226200 neutral ceramidase precursor, putative, expressed K12349: neutral ceramidase
10 Sobic.005G079900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@F-box domain containing protein, expressed -
11 Sobic.002G304000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nitrilase, putative, expressed K01431: UPB1, beta-ureidopropionase
12 Sobic.003G005600 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
13 Sobic.009G153000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@actin, putative, expressed K10355: actin, other eukaryote
14 Sobic.005G019800 ZF-HD protein dimerisation region containing protein, expressed -
15 Sobic.007G186200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@solute carrier family 35 member F1, putative, expressed K15287: solute carrier family 35, member F1/2
16 Sobic.003G138200 expressed protein -
17 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
18 Sobic.010G072800 exportin-7-A, putative, expressed K18460: XPO7, exportin-7
19 Sobic.001G488500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"OsFBK12(Ortholog in rice:Chen et al., 2013)"(PubMedID : 31659851)@OsFBK12 - F-box domain and kelch repeat containing protein, expressed -
20 Sobic.002G274800 "senescence-inducible chloroplast stay-green protein, GenBank annotation:AY850140"(PubMedID : 17513504)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@senescence-inducible chloroplast stay-green protein 1, putative, expressed -


Gene co-expression network
sample Sobic001G395700 Sobic001G395700 Sobic002G058500 Sobic002G058500 Sobic001G395700--Sobic002G058500 Sobic003G012300 Sobic003G012300 Sobic001G395700--Sobic003G012300 Sobic002G215700 Sobic002G215700 Sobic001G395700--Sobic002G215700 Sobic006G139000 Sobic006G139000 Sobic001G395700--Sobic006G139000 Sobic001G227800 Sobic001G227800 Sobic001G395700--Sobic001G227800 Sobic002G195000 Sobic002G195000 Sobic001G395700--Sobic002G195000 Sobic004G101900 Sobic004G101900 Sobic001G395700--Sobic004G101900 Sobic005G231900 Sobic005G231900 Sobic001G395700--Sobic005G231900 Sobic003G226200 Sobic003G226200 Sobic001G395700--Sobic003G226200 Sobic002G058500--Sobic006G139000 Sobic002G058500--Sobic001G227800 Sobic002G058500--Sobic001G395700 Sobic005G019800 Sobic005G019800 Sobic002G058500--Sobic005G019800 Sobic002G058500--Sobic002G215700 Sobic002G058500--Sobic004G101900 Sobic002G058500--Sobic003G226200 Sobic004G124200 Sobic004G124200 Sobic002G058500--Sobic004G124200 Sobic001G280000 Sobic001G280000 Sobic002G058500--Sobic001G280000 Sobic003G012300--Sobic001G395700 Sobic003G012300--Sobic005G231900 Sobic002G274800 Sobic002G274800 Sobic003G012300--Sobic002G274800 Sobic003G214400 Sobic003G214400 Sobic003G012300--Sobic003G214400 Sobic002G420700 Sobic002G420700 Sobic003G012300--Sobic002G420700 Sobic009G153000 Sobic009G153000 Sobic003G012300--Sobic009G153000 Sobic003G012300--Sobic002G058500 Sobic004G162400 Sobic004G162400 Sobic003G012300--Sobic004G162400 Sobic007G186200 Sobic007G186200 Sobic003G012300--Sobic007G186200 Sobic002G215700--Sobic001G227800 Sobic009G054500 Sobic009G054500 Sobic002G215700--Sobic009G054500 Sobic009G226300 Sobic009G226300 Sobic002G215700--Sobic009G226300 Sobic002G215700--Sobic004G101900 Sobic002G304000 Sobic002G304000 Sobic002G215700--Sobic002G304000 Sobic006G100332 Sobic006G100332 Sobic002G215700--Sobic006G100332 Sobic003G138200 Sobic003G138200 Sobic002G215700--Sobic003G138200 Sobic003G148800 Sobic003G148800 Sobic002G215700--Sobic003G148800 Sobic005G018500 Sobic005G018500 Sobic002G215700--Sobic005G018500 Sobic006G139000--Sobic002G058500 Sobic001G417600 Sobic001G417600 Sobic006G139000--Sobic001G417600 Sobic006G139000--Sobic001G280000 Sobic006G139000--Sobic005G019800 Sobic006G139000--Sobic001G395700 Sobic006G139000--Sobic003G226200 Sobic005G197100 Sobic005G197100 Sobic006G139000--Sobic005G197100 Sobic003G304200 Sobic003G304200 Sobic006G139000--Sobic003G304200 Sobic009G055600 Sobic009G055600 Sobic006G139000--Sobic009G055600 Sobic001G227800--Sobic002G215700 Sobic001G227800--Sobic009G226300 Sobic001G227800--Sobic009G054500 Sobic007G187300 Sobic007G187300 Sobic001G227800--Sobic007G187300 Sobic003G259200 Sobic003G259200 Sobic001G227800--Sobic003G259200 Sobic001G227800--Sobic002G304000 Sobic001G227800--Sobic005G018500 Sobic001G227800--Sobic006G100332 Sobic003G219600 Sobic003G219600 Sobic001G227800--Sobic003G219600 Sobic002G195000--Sobic005G231900 Sobic002G195000--Sobic001G395700 Sobic003G105800 Sobic003G105800 Sobic002G195000--Sobic003G105800 Sobic002G195000--Sobic004G162400 Sobic002G195000--Sobic002G304000 Sobic002G195000--Sobic004G101900 Sobic005G216000 Sobic005G216000 Sobic002G195000--Sobic005G216000 Sobic003G184900 Sobic003G184900 Sobic002G195000--Sobic003G184900 Sobic008G190900 Sobic008G190900 Sobic002G195000--Sobic008G190900 Sobic004G101900--Sobic002G304000 Sobic004G101900--Sobic002G215700 Sobic001G325200 Sobic001G325200 Sobic004G101900--Sobic001G325200 Sobic004G101900--Sobic009G226300 Sobic004G101900--Sobic009G054500 Sobic008G062200 Sobic008G062200 Sobic004G101900--Sobic008G062200 Sobic004G101900--Sobic003G148800 Sobic004G101900--Sobic004G124200 Sobic001G015500 Sobic001G015500 Sobic004G101900--Sobic001G015500 Sobic005G231900--Sobic004G162400 Sobic001G488500 Sobic001G488500 Sobic005G231900--Sobic001G488500 Sobic005G079900 Sobic005G079900 Sobic005G231900--Sobic005G079900 Sobic005G231900--Sobic004G101900 Sobic005G231900--Sobic005G216000 Sobic004G236600 Sobic004G236600 Sobic005G231900--Sobic004G236600 Sobic005G231900--Sobic002G304000 Sobic002G322900 Sobic002G322900 Sobic005G231900--Sobic002G322900 Sobic006G271200 Sobic006G271200 Sobic005G231900--Sobic006G271200 Sobic009G234800 Sobic009G234800 Sobic003G226200--Sobic009G234800 Sobic003G226200--Sobic002G058500 Sobic003G226200--Sobic005G079900 Sobic007G041400 Sobic007G041400 Sobic003G226200--Sobic007G041400 Sobic001G265600 Sobic001G265600 Sobic003G226200--Sobic001G265600 Sobic002G415900 Sobic002G415900 Sobic003G226200--Sobic002G415900 Sobic007G068100 Sobic007G068100 Sobic003G226200--Sobic007G068100 Sobic003G226200--Sobic002G215700 Sobic003G226200--Sobic004G101900
Octagon: transcription factors


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