Gene annotation
Transcriptome id Sobic.001G410600.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QNX5
Pfam -
Panther DB PTHR36043 PTHR36043:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G53470 : -
RAP-DB (Rice) LOC_Os03g17660.2 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK22205
Barley -
Wheat TraesCS4B02G198100 , TraesCS4D02G198900 , TraesCS4A02G105900 , TraesCS4A02G105900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G115900 mitochondrial carrier protein, putative, expressed -
2 Sobic.004G027600 expressed protein -
3 Sobic.003G077700 DUF647 domain containing protein, putative, expressed -
4 Sobic.009G237100 -(PubMedID : 26976818)@bile acid sodium symporter, putative, expressed K14347: SLC10A7, solute carrier family 10 (sodium/bile acid cotransporter), member 7
5 Sobic.001G003200 RNApolymerase sigma-subunit F(PubMedID : 26465154)@RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
6 Sobic.001G468700 expressed protein -
7 Sobic.002G220900 expressed protein -
8 Sobic.K031800 inositol-1-monophosphatase, putative, expressed K01082: cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
9 Sobic.001G133000 expressed protein -
10 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
11 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
12 Sobic.003G301300 PPR repeat domain containing protein, putative, expressed -
13 Sobic.004G154200 expressed protein -
14 Sobic.003G262200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
15 Sobic.003G233700 SET domain-containing protein, putative, expressed -
16 Sobic.008G026700 expressed protein -
17 Sobic.007G103400 expressed protein -
18 Sobic.004G121400 CAX 1c(PubMedID : 22196357)@cation exchanger 3(PubMedID : 26320239)@sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
19 Sobic.002G275300 deoxyribodipyrimidine photolyase family protein, expressed -
20 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)


Gene co-expression network
sample Sobic001G410600 Sobic001G410600 Sobic008G115900 Sobic008G115900 Sobic001G410600--Sobic008G115900 Sobic004G027600 Sobic004G027600 Sobic001G410600--Sobic004G027600 Sobic003G077700 Sobic003G077700 Sobic001G410600--Sobic003G077700 Sobic009G237100 Sobic009G237100 Sobic001G410600--Sobic009G237100 Sobic001G003200 Sobic001G003200 Sobic001G410600--Sobic001G003200 Sobic001G468700 Sobic001G468700 Sobic001G410600--Sobic001G468700 Sobic002G220900 Sobic002G220900 Sobic001G410600--Sobic002G220900 SobicK031800 SobicK031800 Sobic001G410600--SobicK031800 Sobic001G133000 Sobic001G133000 Sobic001G410600--Sobic001G133000 Sobic007G136200 Sobic007G136200 Sobic008G115900--Sobic007G136200 Sobic006G158100 Sobic006G158100 Sobic008G115900--Sobic006G158100 Sobic006G130300 Sobic006G130300 Sobic008G115900--Sobic006G130300 Sobic006G207800 Sobic006G207800 Sobic008G115900--Sobic006G207800 Sobic004G356400 Sobic004G356400 Sobic008G115900--Sobic004G356400 Sobic001G017300 Sobic001G017300 Sobic008G115900--Sobic001G017300 Sobic010G153900 Sobic010G153900 Sobic008G115900--Sobic010G153900 Sobic003G229300 Sobic003G229300 Sobic008G115900--Sobic003G229300 Sobic001G491000 Sobic001G491000 Sobic008G115900--Sobic001G491000 Sobic004G189800 Sobic004G189800 Sobic004G027600--Sobic004G189800 Sobic003G185900 Sobic003G185900 Sobic004G027600--Sobic003G185900 Sobic010G251700 Sobic010G251700 Sobic004G027600--Sobic010G251700 Sobic004G112100 Sobic004G112100 Sobic004G027600--Sobic004G112100 Sobic004G027600--Sobic009G237100 Sobic010G067100 Sobic010G067100 Sobic004G027600--Sobic010G067100 Sobic010G085100 Sobic010G085100 Sobic004G027600--Sobic010G085100 Sobic001G258200 Sobic001G258200 Sobic004G027600--Sobic001G258200 Sobic005G101200 Sobic005G101200 Sobic004G027600--Sobic005G101200 Sobic004G337400 Sobic004G337400 Sobic003G077700--Sobic004G337400 Sobic001G516901 Sobic001G516901 Sobic003G077700--Sobic001G516901 Sobic005G231100 Sobic005G231100 Sobic003G077700--Sobic005G231100 Sobic005G084500 Sobic005G084500 Sobic003G077700--Sobic005G084500 Sobic001G378100 Sobic001G378100 Sobic003G077700--Sobic001G378100 Sobic003G233700 Sobic003G233700 Sobic003G077700--Sobic003G233700 Sobic001G500600 Sobic001G500600 Sobic003G077700--Sobic001G500600 Sobic002G347600 Sobic002G347600 Sobic003G077700--Sobic002G347600 Sobic003G301300 Sobic003G301300 Sobic003G077700--Sobic003G301300 Sobic007G009200 Sobic007G009200 Sobic009G237100--Sobic007G009200 Sobic009G237100--Sobic006G207800 Sobic006G238200 Sobic006G238200 Sobic009G237100--Sobic006G238200 Sobic001G100000 Sobic001G100000 Sobic009G237100--Sobic001G100000 Sobic009G237100--Sobic001G491000 Sobic002G275300 Sobic002G275300 Sobic009G237100--Sobic002G275300 Sobic010G035400 Sobic010G035400 Sobic009G237100--Sobic010G035400 Sobic001G102800 Sobic001G102800 Sobic009G237100--Sobic001G102800 Sobic010G181300 Sobic010G181300 Sobic009G237100--Sobic010G181300 Sobic009G056700 Sobic009G056700 Sobic001G003200--Sobic009G056700 Sobic007G053800 Sobic007G053800 Sobic001G003200--Sobic007G053800 Sobic004G121400 Sobic004G121400 Sobic001G003200--Sobic004G121400 Sobic007G150100 Sobic007G150100 Sobic001G003200--Sobic007G150100 Sobic006G188000 Sobic006G188000 Sobic001G003200--Sobic006G188000 Sobic003G398800 Sobic003G398800 Sobic001G003200--Sobic003G398800 Sobic001G048400 Sobic001G048400 Sobic001G003200--Sobic001G048400 Sobic003G431700 Sobic003G431700 Sobic001G003200--Sobic003G431700 Sobic001G504400 Sobic001G504400 Sobic001G003200--Sobic001G504400 Sobic010G002700 Sobic010G002700 Sobic001G468700--Sobic010G002700 Sobic003G017100 Sobic003G017100 Sobic001G468700--Sobic003G017100 Sobic004G028500 Sobic004G028500 Sobic001G468700--Sobic004G028500 Sobic001G468700--Sobic001G017300 Sobic009G121000 Sobic009G121000 Sobic001G468700--Sobic009G121000 Sobic003G247400 Sobic003G247400 Sobic001G468700--Sobic003G247400 Sobic003G313300 Sobic003G313300 Sobic001G468700--Sobic003G313300 Sobic003G276300 Sobic003G276300 Sobic001G468700--Sobic003G276300 Sobic003G004200 Sobic003G004200 Sobic001G468700--Sobic003G004200 Sobic002G220900--Sobic003G398800 Sobic008G033000 Sobic008G033000 Sobic002G220900--Sobic008G033000 Sobic007G103400 Sobic007G103400 Sobic002G220900--Sobic007G103400 Sobic002G220900--Sobic001G504400 Sobic002G220900--Sobic007G009200 Sobic002G220900--Sobic009G237100 Sobic002G220900--Sobic003G185900 Sobic005G204200 Sobic005G204200 Sobic002G220900--Sobic005G204200 Sobic002G220900--Sobic010G035400 Sobic003G219200 Sobic003G219200 SobicK031800--Sobic003G219200 Sobic008G188600 Sobic008G188600 SobicK031800--Sobic008G188600 Sobic003G387100 Sobic003G387100 SobicK031800--Sobic003G387100 Sobic009G175500 Sobic009G175500 SobicK031800--Sobic009G175500 Sobic005G149400 Sobic005G149400 SobicK031800--Sobic005G149400 Sobic004G336200 Sobic004G336200 SobicK031800--Sobic004G336200 SobicK031800--Sobic010G035400 SobicK031800--Sobic002G275300 Sobic006G102000 Sobic006G102000 SobicK031800--Sobic006G102000 Sobic005G106600 Sobic005G106600 Sobic001G133000--Sobic005G106600 Sobic006G219600 Sobic006G219600 Sobic001G133000--Sobic006G219600 Sobic009G038900 Sobic009G038900 Sobic001G133000--Sobic009G038900 Sobic003G220100 Sobic003G220100 Sobic001G133000--Sobic003G220100 Sobic006G133900 Sobic006G133900 Sobic001G133000--Sobic006G133900 Sobic001G333800 Sobic001G333800 Sobic001G133000--Sobic001G333800 Sobic001G243200 Sobic001G243200 Sobic001G133000--Sobic001G243200 Sobic009G201300 Sobic009G201300 Sobic001G133000--Sobic009G201300 Sobic009G215500 Sobic009G215500 Sobic001G133000--Sobic009G215500
Octagon: transcription factors


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