Gene annotation
Transcriptome id Sobic.001G439000.1
Synonym influx carriers auxin resistant 1/like aux1, Sb01g041270, LAX2, SbLAX2
Functional annotation "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in stem, expression induced by IAA, BR and ABA treatments" (PubMedID : 20528920)
transmembrane amino acid transporter protein, putative, expressed
UniProt C5WR01
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF242
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology K13946; AUX1, auxin influx carrier (AUX1 LAX family)
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G21050 : like AUXIN RESISTANT 2
RAP-DB (Rice) LOC_Os03g14080.1 : transmembrane amino acid transporter protein, putative, expressed
MaizeGDB (Corn) Zm00025a043787 , Zm00025a003791 , Zm00025a026807 , Zm00025a033966 , Zm00025a001545
Brachypodium KQK10644 , KQK10645 , KQJ96114 , KQK22608
Barley HORVU4Hr1G063650.4 , HORVU4Hr1G063650.6 , HORVU4Hr1G063650.1 , HORVU4Hr1G063650.2 , HORVU1Hr1G073490.6 , HORVU1Hr1G073490.7 , HORVU1Hr1G073490.4 , HORVU1Hr1G073490.5 , HORVU1Hr1G073490.2 , HORVU1Hr1G073490.1 , HORVU1Hr1G073490.8 , HORVU1Hr1G073490.9 , HORVU4Hr1G019930.1 , HORVU4Hr1G019930.2 , HORVU4Hr1G019930.3 , HORVU4Hr1G019930.4 , HORVU4Hr1G019930.5 , HORVU3Hr1G084750.1 , HORVU3Hr1G084750.3 , HORVU3Hr1G084750.5 , HORVU3Hr1G084750.4 , HORVU3Hr1G084750.7 , HORVU3Hr1G084750.6 , HORVU6Hr1G031510.1 , HORVU1Hr1G016700.3 , HORVU1Hr1G016700.1 , HORVU4Hr1G063650.5 , HORVU4Hr1G063650.7 , HORVU4Hr1G063650.3 , HORVU4Hr1G063650.8 , HORVU3Hr1G084750.2
Wheat TraesCS1D02G277600 , TraesCS3B02G401000 , TraesCS3D02G362100 , TraesCS4D02G108800 , TraesCS4B02G226500 , TraesCS1B02G095900 , TraesCS4A02G207600 , TraesCS1A02G278400 , TraesCS3A02G369200 , TraesCS1A02G077800 , TraesCS4B02G111100 , TraesCS4D02G227200 , TraesCS1D02G079900 , TraesCS4A02G070500 , TraesCS1B02G287300
Populus -


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cDNA sequences
Sobic.001G439000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G137500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
3 Sobic.001G267100 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
4 Sobic.002G315500 ankyrin repeat domain containing protein, expressed -
5 Sobic.010G277300 "BRD2(Ortholog in rice:Hong et al., 2005)"(PubMedID : 31659939)@FAD-linked oxidoreductase protein, putative, expressed K09828: DHCR24, Delta24-sterol reductase
6 Sobic.006G187000 leucine-rich repeat family protein, putative, expressed -
7 Sobic.005G210600 expressed protein -
8 Sobic.006G255300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
9 Sobic.006G212400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@QRT3, putative, expressed -
10 Sobic.001G080200 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.004G233700 glycosyl hydrolase family 3 protein, putative, expressed -
12 Sobic.007G225400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
13 Sobic.010G139400 expressed protein -
14 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
15 Sobic.001G276800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
16 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
17 Sobic.004G263700 expressed protein -
18 Sobic.002G278200 thaumatin, putative, expressed -
19 Sobic.004G093400 beta-galactosidase precursor, putative, expressed -
20 Sobic.001G064600 IQ calmodulin-binding motif domain containing protein, expressed -


Gene co-expression network
sample Sobic001G439000 Sobic001G439000 Sobic009G137500 Sobic009G137500 Sobic001G439000--Sobic009G137500 Sobic006G105600 Sobic006G105600 Sobic001G439000--Sobic006G105600 Sobic001G267100 Sobic001G267100 Sobic001G439000--Sobic001G267100 Sobic002G315500 Sobic002G315500 Sobic001G439000--Sobic002G315500 Sobic010G277300 Sobic010G277300 Sobic001G439000--Sobic010G277300 Sobic006G187000 Sobic006G187000 Sobic001G439000--Sobic006G187000 Sobic005G210600 Sobic005G210600 Sobic001G439000--Sobic005G210600 Sobic006G255300 Sobic006G255300 Sobic001G439000--Sobic006G255300 Sobic006G212400 Sobic006G212400 Sobic001G439000--Sobic006G212400 Sobic009G137500--Sobic006G187000 Sobic009G137500--Sobic001G267100 Sobic009G137500--Sobic006G105600 Sobic009G137500--Sobic006G255300 Sobic003G366000 Sobic003G366000 Sobic009G137500--Sobic003G366000 Sobic003G016200 Sobic003G016200 Sobic009G137500--Sobic003G016200 Sobic001G276800 Sobic001G276800 Sobic009G137500--Sobic001G276800 Sobic008G150500 Sobic008G150500 Sobic009G137500--Sobic008G150500 Sobic001G046400 Sobic001G046400 Sobic009G137500--Sobic001G046400 Sobic005G091000 Sobic005G091000 Sobic006G105600--Sobic005G091000 Sobic006G105600--Sobic001G267100 Sobic006G124400 Sobic006G124400 Sobic006G105600--Sobic006G124400 Sobic002G296000 Sobic002G296000 Sobic006G105600--Sobic002G296000 Sobic006G105600--Sobic009G137500 Sobic002G394500 Sobic002G394500 Sobic006G105600--Sobic002G394500 Sobic004G233700 Sobic004G233700 Sobic006G105600--Sobic004G233700 Sobic008G083500 Sobic008G083500 Sobic006G105600--Sobic008G083500 Sobic001G304800 Sobic001G304800 Sobic006G105600--Sobic001G304800 Sobic001G267100--Sobic006G187000 Sobic001G267100--Sobic005G091000 Sobic001G145200 Sobic001G145200 Sobic001G267100--Sobic001G145200 Sobic001G267100--Sobic006G105600 Sobic001G267100--Sobic009G137500 Sobic001G381100 Sobic001G381100 Sobic001G267100--Sobic001G381100 Sobic001G345200 Sobic001G345200 Sobic001G267100--Sobic001G345200 Sobic004G168600 Sobic004G168600 Sobic001G267100--Sobic004G168600 Sobic006G074900 Sobic006G074900 Sobic001G267100--Sobic006G074900 Sobic001G470200 Sobic001G470200 Sobic002G315500--Sobic001G470200 Sobic008G097700 Sobic008G097700 Sobic002G315500--Sobic008G097700 Sobic010G192500 Sobic010G192500 Sobic002G315500--Sobic010G192500 Sobic010G275800 Sobic010G275800 Sobic002G315500--Sobic010G275800 Sobic003G089300 Sobic003G089300 Sobic002G315500--Sobic003G089300 Sobic002G315500--Sobic001G046400 Sobic002G337600 Sobic002G337600 Sobic002G315500--Sobic002G337600 Sobic001G093000 Sobic001G093000 Sobic002G315500--Sobic001G093000 Sobic002G404300 Sobic002G404300 Sobic002G315500--Sobic002G404300 Sobic007G094400 Sobic007G094400 Sobic010G277300--Sobic007G094400 Sobic001G468500 Sobic001G468500 Sobic010G277300--Sobic001G468500 Sobic007G225400 Sobic007G225400 Sobic010G277300--Sobic007G225400 Sobic002G286700 Sobic002G286700 Sobic010G277300--Sobic002G286700 Sobic005G047100 Sobic005G047100 Sobic010G277300--Sobic005G047100 Sobic004G170900 Sobic004G170900 Sobic010G277300--Sobic004G170900 Sobic004G286700 Sobic004G286700 Sobic010G277300--Sobic004G286700 Sobic009G242501 Sobic009G242501 Sobic010G277300--Sobic009G242501 Sobic002G146601 Sobic002G146601 Sobic010G277300--Sobic002G146601 Sobic006G187000--Sobic008G150500 Sobic006G187000--Sobic009G137500 Sobic006G187000--Sobic001G046400 Sobic006G187000--Sobic003G366000 Sobic004G302700 Sobic004G302700 Sobic006G187000--Sobic004G302700 Sobic001G160000 Sobic001G160000 Sobic006G187000--Sobic001G160000 Sobic006G187000--Sobic003G016200 Sobic003G283900 Sobic003G283900 Sobic006G187000--Sobic003G283900 Sobic006G187000--Sobic001G267100 Sobic007G207700 Sobic007G207700 Sobic005G210600--Sobic007G207700 Sobic005G016300 Sobic005G016300 Sobic005G210600--Sobic005G016300 Sobic001G379500 Sobic001G379500 Sobic005G210600--Sobic001G379500 Sobic006G134200 Sobic006G134200 Sobic005G210600--Sobic006G134200 Sobic009G101100 Sobic009G101100 Sobic005G210600--Sobic009G101100 Sobic004G180400 Sobic004G180400 Sobic005G210600--Sobic004G180400 Sobic006G179200 Sobic006G179200 Sobic005G210600--Sobic006G179200 Sobic001G140600 Sobic001G140600 Sobic005G210600--Sobic001G140600 Sobic010G003300 Sobic010G003300 Sobic005G210600--Sobic010G003300 Sobic006G255300--Sobic001G276800 Sobic001G068132 Sobic001G068132 Sobic006G255300--Sobic001G068132 Sobic006G255300--Sobic009G137500 Sobic006G255300--Sobic006G187000 Sobic006G197400 Sobic006G197400 Sobic006G255300--Sobic006G197400 Sobic001G246600 Sobic001G246600 Sobic006G255300--Sobic001G246600 Sobic002G175200 Sobic002G175200 Sobic006G255300--Sobic002G175200 Sobic004G330200 Sobic004G330200 Sobic006G255300--Sobic004G330200 Sobic006G255300--Sobic001G267100 Sobic010G139400 Sobic010G139400 Sobic006G212400--Sobic010G139400 Sobic004G093400 Sobic004G093400 Sobic006G212400--Sobic004G093400 Sobic008G154801 Sobic008G154801 Sobic006G212400--Sobic008G154801 Sobic002G160800 Sobic002G160800 Sobic006G212400--Sobic002G160800 Sobic006G212400--Sobic002G315500 Sobic005G004000 Sobic005G004000 Sobic006G212400--Sobic005G004000 Sobic003G095500 Sobic003G095500 Sobic006G212400--Sobic003G095500 Sobic001G123100 Sobic001G123100 Sobic006G212400--Sobic001G123100 Sobic001G080200 Sobic001G080200 Sobic006G212400--Sobic001G080200
Octagon: transcription factors


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