Gene annotation
Transcriptome id Sobic.010G139400.1
Synonym Sb10g014630
Functional annotation expressed protein
UniProt C5Z2E2
Pfam -
Panther DB PTHR33429 PTHR33429:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74055 : -
RAP-DB (Rice) LOC_Os06g29370.1 : expressed protein
MaizeGDB (Corn) Zm00025a050705
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G212400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@QRT3, putative, expressed -
2 Sobic.007G129000 nucleobase-ascorbate transporter, putative, expressed -
3 Sobic.001G439000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
4 Sobic.002G232600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
5 Sobic.005G123500 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
6 Sobic.005G004000 MYB family transcription factor, putative, expressed -
7 Sobic.004G093400 beta-galactosidase precursor, putative, expressed -
8 Sobic.007G225400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
9 Sobic.001G203700 formin-like protein 6 precursor, putative, expressed -
10 Sobic.010G061700 jp18, putative, expressed -
11 Sobic.001G409700 RNA recognition motif containing protein, putative, expressed -
12 Sobic.008G154801 - -
13 Sobic.001G160600 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
14 Sobic.003G132500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@subtilisin-like protease, putative, expressed -
15 Sobic.002G315500 ankyrin repeat domain containing protein, expressed -
16 Sobic.006G030200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.006G072400 DUF584 domain containing protein, putative, expressed -
18 Sobic.003G229800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@X8 domain containing protein, expressed -
19 Sobic.001G080200 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.002G278200 thaumatin, putative, expressed -


Gene co-expression network
sample Sobic010G139400 Sobic010G139400 Sobic006G212400 Sobic006G212400 Sobic010G139400--Sobic006G212400 Sobic007G129000 Sobic007G129000 Sobic010G139400--Sobic007G129000 Sobic001G439000 Sobic001G439000 Sobic010G139400--Sobic001G439000 Sobic002G232600 Sobic002G232600 Sobic010G139400--Sobic002G232600 Sobic005G123500 Sobic005G123500 Sobic010G139400--Sobic005G123500 Sobic005G004000 Sobic005G004000 Sobic010G139400--Sobic005G004000 Sobic004G093400 Sobic004G093400 Sobic010G139400--Sobic004G093400 Sobic007G225400 Sobic007G225400 Sobic010G139400--Sobic007G225400 Sobic001G203700 Sobic001G203700 Sobic010G139400--Sobic001G203700 Sobic006G212400--Sobic010G139400 Sobic006G212400--Sobic004G093400 Sobic008G154801 Sobic008G154801 Sobic006G212400--Sobic008G154801 Sobic002G160800 Sobic002G160800 Sobic006G212400--Sobic002G160800 Sobic002G315500 Sobic002G315500 Sobic006G212400--Sobic002G315500 Sobic006G212400--Sobic005G004000 Sobic003G095500 Sobic003G095500 Sobic006G212400--Sobic003G095500 Sobic001G123100 Sobic001G123100 Sobic006G212400--Sobic001G123100 Sobic001G080200 Sobic001G080200 Sobic006G212400--Sobic001G080200 Sobic006G144700 Sobic006G144700 Sobic007G129000--Sobic006G144700 Sobic010G265900 Sobic010G265900 Sobic007G129000--Sobic010G265900 Sobic009G208900 Sobic009G208900 Sobic007G129000--Sobic009G208900 Sobic004G036800 Sobic004G036800 Sobic007G129000--Sobic004G036800 Sobic007G129000--Sobic001G080200 Sobic004G286700 Sobic004G286700 Sobic007G129000--Sobic004G286700 Sobic002G158900 Sobic002G158900 Sobic007G129000--Sobic002G158900 Sobic003G256900 Sobic003G256900 Sobic007G129000--Sobic003G256900 Sobic001G468500 Sobic001G468500 Sobic007G129000--Sobic001G468500 Sobic009G137500 Sobic009G137500 Sobic001G439000--Sobic009G137500 Sobic006G105600 Sobic006G105600 Sobic001G439000--Sobic006G105600 Sobic001G267100 Sobic001G267100 Sobic001G439000--Sobic001G267100 Sobic001G439000--Sobic002G315500 Sobic010G277300 Sobic010G277300 Sobic001G439000--Sobic010G277300 Sobic006G187000 Sobic006G187000 Sobic001G439000--Sobic006G187000 Sobic005G210600 Sobic005G210600 Sobic001G439000--Sobic005G210600 Sobic006G255300 Sobic006G255300 Sobic001G439000--Sobic006G255300 Sobic001G439000--Sobic006G212400 Sobic008G186800 Sobic008G186800 Sobic002G232600--Sobic008G186800 Sobic002G232600--Sobic010G139400 Sobic006G190600 Sobic006G190600 Sobic002G232600--Sobic006G190600 Sobic003G407001 Sobic003G407001 Sobic002G232600--Sobic003G407001 Sobic009G247500 Sobic009G247500 Sobic002G232600--Sobic009G247500 Sobic009G008701 Sobic009G008701 Sobic002G232600--Sobic009G008701 Sobic007G065800 Sobic007G065800 Sobic002G232600--Sobic007G065800 Sobic010G211600 Sobic010G211600 Sobic002G232600--Sobic010G211600 Sobic003G117500 Sobic003G117500 Sobic002G232600--Sobic003G117500 Sobic002G393600 Sobic002G393600 Sobic005G123500--Sobic002G393600 Sobic004G085700 Sobic004G085700 Sobic005G123500--Sobic004G085700 Sobic002G387900 Sobic002G387900 Sobic005G123500--Sobic002G387900 Sobic009G216800 Sobic009G216800 Sobic005G123500--Sobic009G216800 Sobic009G170800 Sobic009G170800 Sobic005G123500--Sobic009G170800 Sobic010G027300 Sobic010G027300 Sobic005G123500--Sobic010G027300 Sobic008G147900 Sobic008G147900 Sobic005G123500--Sobic008G147900 Sobic002G040600 Sobic002G040600 Sobic005G123500--Sobic002G040600 Sobic002G251900 Sobic002G251900 Sobic005G123500--Sobic002G251900 Sobic003G038800 Sobic003G038800 Sobic005G004000--Sobic003G038800 Sobic002G035000 Sobic002G035000 Sobic005G004000--Sobic002G035000 Sobic005G042200 Sobic005G042200 Sobic005G004000--Sobic005G042200 Sobic002G380800 Sobic002G380800 Sobic005G004000--Sobic002G380800 Sobic002G410600 Sobic002G410600 Sobic005G004000--Sobic002G410600 Sobic008G004200 Sobic008G004200 Sobic005G004000--Sobic008G004200 Sobic003G038700 Sobic003G038700 Sobic005G004000--Sobic003G038700 Sobic007G206000 Sobic007G206000 Sobic005G004000--Sobic007G206000 Sobic005G200700 Sobic005G200700 Sobic005G004000--Sobic005G200700 Sobic004G093400--Sobic002G160800 Sobic004G093400--Sobic006G212400 Sobic005G064100 Sobic005G064100 Sobic004G093400--Sobic005G064100 Sobic009G005700 Sobic009G005700 Sobic004G093400--Sobic009G005700 Sobic002G351700 Sobic002G351700 Sobic004G093400--Sobic002G351700 Sobic003G409600 Sobic003G409600 Sobic004G093400--Sobic003G409600 Sobic004G093400--Sobic001G123100 Sobic003G298900 Sobic003G298900 Sobic004G093400--Sobic003G298900 Sobic003G338200 Sobic003G338200 Sobic004G093400--Sobic003G338200 Sobic004G170900 Sobic004G170900 Sobic007G225400--Sobic004G170900 Sobic005G098400 Sobic005G098400 Sobic007G225400--Sobic005G098400 Sobic010G216600 Sobic010G216600 Sobic007G225400--Sobic010G216600 Sobic005G047100 Sobic005G047100 Sobic007G225400--Sobic005G047100 Sobic002G226500 Sobic002G226500 Sobic007G225400--Sobic002G226500 Sobic005G121700 Sobic005G121700 Sobic007G225400--Sobic005G121700 Sobic002G016400 Sobic002G016400 Sobic007G225400--Sobic002G016400 Sobic001G305300 Sobic001G305300 Sobic007G225400--Sobic001G305300 Sobic001G264400 Sobic001G264400 Sobic007G225400--Sobic001G264400 Sobic010G118300 Sobic010G118300 Sobic001G203700--Sobic010G118300 Sobic003G229800 Sobic003G229800 Sobic001G203700--Sobic003G229800 Sobic002G238500 Sobic002G238500 Sobic001G203700--Sobic002G238500 Sobic002G081700 Sobic002G081700 Sobic001G203700--Sobic002G081700 Sobic001G203700--Sobic007G129000 Sobic002G091000 Sobic002G091000 Sobic001G203700--Sobic002G091000 Sobic005G226000 Sobic005G226000 Sobic001G203700--Sobic005G226000 Sobic003G086500 Sobic003G086500 Sobic001G203700--Sobic003G086500 Sobic003G419400 Sobic003G419400 Sobic001G203700--Sobic003G419400
Octagon: transcription factors


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