Gene annotation
Transcriptome id Sobic.002G232600.1
Synonym Sb02g027180
Functional annotation MATE efflux family protein, putative, expressed
UniProt C5X311
Pfam PF01554
Panther DB PTHR11206 PTHR11206:SF150
NCBI CDD KOG1347; Uncharacterized membrane protein, predicted efflux pump
KEGG Orthology K03327; TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
Gene Ontology GO:0016020; membrane GO:0015297antiporter activity GO:0006855drug transmembrane transport


Orthologs (automatic annotation)
TAIR AT5G65380 : MATE efflux family protein
RAP-DB (Rice) LOC_Os09g29284.1 : MATE efflux family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS5D02G254500 , TraesCS5A02G247900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G186800 expressed protein -
2 Sobic.010G139400 expressed protein -
3 Sobic.006G190600 heavy metal-associated domain containing protein, expressed -
4 Sobic.003G407001 - -
5 Sobic.009G247500 DUF623 domain containing protein, expressed -
6 Sobic.009G008701 - K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
7 Sobic.007G065800 Cupin domain containing protein, expressed -
8 Sobic.010G211600 Up-reguralion under heat(PubMedID : 24916767)@gp176, putative, expressed -
9 Sobic.003G117500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
10 Sobic.004G292001 - -
11 Sobic.005G142500 plant protein of unknown function domain containing protein, expressed -
12 Sobic.002G130601 - -
13 Sobic.010G261000 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
14 Sobic.010G190200 polygalacturonase, putative, expressed -
15 Sobic.006G214600 - -
16 Sobic.009G218200 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
17 Sobic.006G019200 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR4 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
18 Sobic.003G364950 - -
19 Sobic.001G081100 OsSub31 - Putative Subtilisin homologue, expressed -
20 Sobic.006G066700 OsFBLD2 - F-box, LRR and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic002G232600 Sobic002G232600 Sobic008G186800 Sobic008G186800 Sobic002G232600--Sobic008G186800 Sobic010G139400 Sobic010G139400 Sobic002G232600--Sobic010G139400 Sobic006G190600 Sobic006G190600 Sobic002G232600--Sobic006G190600 Sobic003G407001 Sobic003G407001 Sobic002G232600--Sobic003G407001 Sobic009G247500 Sobic009G247500 Sobic002G232600--Sobic009G247500 Sobic009G008701 Sobic009G008701 Sobic002G232600--Sobic009G008701 Sobic007G065800 Sobic007G065800 Sobic002G232600--Sobic007G065800 Sobic010G211600 Sobic010G211600 Sobic002G232600--Sobic010G211600 Sobic003G117500 Sobic003G117500 Sobic002G232600--Sobic003G117500 Sobic008G186800--Sobic009G008701 Sobic010G190200 Sobic010G190200 Sobic008G186800--Sobic010G190200 Sobic008G186800--Sobic002G232600 Sobic010G167100 Sobic010G167100 Sobic008G186800--Sobic010G167100 Sobic010G048800 Sobic010G048800 Sobic008G186800--Sobic010G048800 Sobic001G110100 Sobic001G110100 Sobic008G186800--Sobic001G110100 Sobic002G183800 Sobic002G183800 Sobic008G186800--Sobic002G183800 Sobic010G062200 Sobic010G062200 Sobic008G186800--Sobic010G062200 Sobic001G310200 Sobic001G310200 Sobic008G186800--Sobic001G310200 Sobic006G212400 Sobic006G212400 Sobic010G139400--Sobic006G212400 Sobic007G129000 Sobic007G129000 Sobic010G139400--Sobic007G129000 Sobic001G439000 Sobic001G439000 Sobic010G139400--Sobic001G439000 Sobic010G139400--Sobic002G232600 Sobic005G123500 Sobic005G123500 Sobic010G139400--Sobic005G123500 Sobic005G004000 Sobic005G004000 Sobic010G139400--Sobic005G004000 Sobic004G093400 Sobic004G093400 Sobic010G139400--Sobic004G093400 Sobic007G225400 Sobic007G225400 Sobic010G139400--Sobic007G225400 Sobic001G203700 Sobic001G203700 Sobic010G139400--Sobic001G203700 Sobic001G481000 Sobic001G481000 Sobic006G190600--Sobic001G481000 Sobic006G190600--Sobic003G117500 Sobic001G304300 Sobic001G304300 Sobic006G190600--Sobic001G304300 Sobic005G142500 Sobic005G142500 Sobic006G190600--Sobic005G142500 Sobic001G295800 Sobic001G295800 Sobic006G190600--Sobic001G295800 Sobic002G350500 Sobic002G350500 Sobic006G190600--Sobic002G350500 Sobic003G321200 Sobic003G321200 Sobic006G190600--Sobic003G321200 Sobic005G004700 Sobic005G004700 Sobic006G190600--Sobic005G004700 Sobic002G247800 Sobic002G247800 Sobic006G190600--Sobic002G247800 Sobic003G407001--Sobic003G117500 Sobic003G060000 Sobic003G060000 Sobic003G407001--Sobic003G060000 Sobic001G361600 Sobic001G361600 Sobic003G407001--Sobic001G361600 Sobic007G150800 Sobic007G150800 Sobic003G407001--Sobic007G150800 Sobic003G347900 Sobic003G347900 Sobic003G407001--Sobic003G347900 Sobic002G124500 Sobic002G124500 Sobic003G407001--Sobic002G124500 Sobic003G053400 Sobic003G053400 Sobic003G407001--Sobic003G053400 Sobic004G045400 Sobic004G045400 Sobic003G407001--Sobic004G045400 Sobic004G318700 Sobic004G318700 Sobic003G407001--Sobic004G318700 Sobic001G256200 Sobic001G256200 Sobic009G247500--Sobic001G256200 Sobic007G144501 Sobic007G144501 Sobic009G247500--Sobic007G144501 Sobic002G044800 Sobic002G044800 Sobic009G247500--Sobic002G044800 Sobic002G040900 Sobic002G040900 Sobic009G247500--Sobic002G040900 Sobic001G054500 Sobic001G054500 Sobic009G247500--Sobic001G054500 Sobic007G216550 Sobic007G216550 Sobic009G247500--Sobic007G216550 Sobic004G148100 Sobic004G148100 Sobic009G247500--Sobic004G148100 Sobic006G113500 Sobic006G113500 Sobic009G247500--Sobic006G113500 Sobic009G009700 Sobic009G009700 Sobic009G247500--Sobic009G009700 Sobic002G150100 Sobic002G150100 Sobic009G008701--Sobic002G150100 Sobic003G344050 Sobic003G344050 Sobic009G008701--Sobic003G344050 Sobic002G220800 Sobic002G220800 Sobic009G008701--Sobic002G220800 Sobic007G108200 Sobic007G108200 Sobic009G008701--Sobic007G108200 Sobic003G249050 Sobic003G249050 Sobic009G008701--Sobic003G249050 Sobic002G195500 Sobic002G195500 Sobic009G008701--Sobic002G195500 Sobic004G061701 Sobic004G061701 Sobic009G008701--Sobic004G061701 Sobic004G292001 Sobic004G292001 Sobic007G065800--Sobic004G292001 Sobic004G023500 Sobic004G023500 Sobic007G065800--Sobic004G023500 Sobic002G130601 Sobic002G130601 Sobic007G065800--Sobic002G130601 Sobic007G065900 Sobic007G065900 Sobic007G065800--Sobic007G065900 Sobic008G157800 Sobic008G157800 Sobic007G065800--Sobic008G157800 Sobic007G065800--Sobic004G061701 Sobic005G217300 Sobic005G217300 Sobic007G065800--Sobic005G217300 Sobic007G065800--Sobic002G150100 Sobic002G004900 Sobic002G004900 Sobic010G211600--Sobic002G004900 Sobic003G280200 Sobic003G280200 Sobic010G211600--Sobic003G280200 Sobic008G027600 Sobic008G027600 Sobic010G211600--Sobic008G027600 Sobic008G158100 Sobic008G158100 Sobic010G211600--Sobic008G158100 Sobic008G172600 Sobic008G172600 Sobic010G211600--Sobic008G172600 Sobic005G177600 Sobic005G177600 Sobic010G211600--Sobic005G177600 Sobic003G417700 Sobic003G417700 Sobic010G211600--Sobic003G417700 Sobic001G318500 Sobic001G318500 Sobic010G211600--Sobic001G318500 Sobic002G139300 Sobic002G139300 Sobic010G211600--Sobic002G139300 Sobic001G475500 Sobic001G475500 Sobic003G117500--Sobic001G475500 Sobic003G027400 Sobic003G027400 Sobic003G117500--Sobic003G027400 Sobic003G117500--Sobic001G481000 Sobic001G310300 Sobic001G310300 Sobic003G117500--Sobic001G310300 Sobic003G117500--Sobic007G150800 Sobic001G434300 Sobic001G434300 Sobic003G117500--Sobic001G434300 Sobic003G219800 Sobic003G219800 Sobic003G117500--Sobic003G219800 Sobic003G117500--Sobic002G350500 Sobic001G502900 Sobic001G502900 Sobic003G117500--Sobic001G502900
Octagon: transcription factors


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