Gene annotation
Transcriptome id Sobic.006G066700.1,Sobic.006G066700.3,Sobic.006G066700.4
Synonym Sb06g015350
Functional annotation OsFBLD2 - F-box, LRR and FBD domain containing protein, expressed
UniProt A0A1Z5RDD3 , C5YFS3 , A0A1Z5RCN4
Pfam PF00646 PF08387 PF00646
Panther DB PTHR32212 PTHR32212:SF80
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G13570 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os04g33400.1 : OsFBLD2 - F-box, LRR and FBD domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium PNT61019 , KQJ82475
Barley -
Wheat TraesCS1D02G268400 , TraesCS1D02G268400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G092200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
2 Sobic.001G469100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-06 - C2H2 zinc finger protein, expressed -
3 Sobic.008G135500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.006G125200 ubiquitin family protein, putative, expressed -
5 Sobic.005G129700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
6 Sobic.009G122600 LRP1, putative, expressed -
7 Sobic.001G468500 ethylene-responsive element-binding protein, putative, expressed -
8 Sobic.010G261000 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
9 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
10 Sobic.001G080200 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.007G216550 - -
12 Sobic.010G090100 phosphoglycerate mutase, putative, expressed K01834: PGAM, 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
13 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
14 Sobic.001G081100 OsSub31 - Putative Subtilisin homologue, expressed -
15 Sobic.002G247800 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL17 - SBP-box gene family member, expressed -
16 Sobic.001G397100 expressed protein -
17 Sobic.006G133700 transcription factor RF2a, putative, expressed -
18 Sobic.002G386300 exosome complex exonuclease, putative, expressed K12587: MTR3, exosome complex component MTR3
19 Sobic.006G200000 RNA recognition motif, putative, expressed -
20 Sobic.006G120700 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, putative, expressed K03434: N-acetylglucosaminylphosphatidylinositol deacetylase


Gene co-expression network
sample Sobic006G066700 Sobic006G066700 Sobic002G092200 Sobic002G092200 Sobic006G066700--Sobic002G092200 Sobic001G469100 Sobic001G469100 Sobic006G066700--Sobic001G469100 Sobic008G135500 Sobic008G135500 Sobic006G066700--Sobic008G135500 Sobic006G125200 Sobic006G125200 Sobic006G066700--Sobic006G125200 Sobic005G129700 Sobic005G129700 Sobic006G066700--Sobic005G129700 Sobic009G122600 Sobic009G122600 Sobic006G066700--Sobic009G122600 Sobic001G468500 Sobic001G468500 Sobic006G066700--Sobic001G468500 Sobic010G261000 Sobic010G261000 Sobic006G066700--Sobic010G261000 Sobic010G265900 Sobic010G265900 Sobic006G066700--Sobic010G265900 Sobic002G315400 Sobic002G315400 Sobic002G092200--Sobic002G315400 Sobic002G092200--Sobic010G265900 Sobic003G412800 Sobic003G412800 Sobic002G092200--Sobic003G412800 Sobic003G249900 Sobic003G249900 Sobic002G092200--Sobic003G249900 Sobic004G095700 Sobic004G095700 Sobic002G092200--Sobic004G095700 Sobic002G300000 Sobic002G300000 Sobic002G092200--Sobic002G300000 Sobic006G200000 Sobic006G200000 Sobic002G092200--Sobic006G200000 Sobic002G351100 Sobic002G351100 Sobic002G092200--Sobic002G351100 Sobic005G080900 Sobic005G080900 Sobic002G092200--Sobic005G080900 Sobic004G166500 Sobic004G166500 Sobic001G469100--Sobic004G166500 Sobic003G319000 Sobic003G319000 Sobic001G469100--Sobic003G319000 Sobic007G150000 Sobic007G150000 Sobic001G469100--Sobic007G150000 Sobic003G023500 Sobic003G023500 Sobic001G469100--Sobic003G023500 Sobic004G297300 Sobic004G297300 Sobic001G469100--Sobic004G297300 Sobic006G143500 Sobic006G143500 Sobic001G469100--Sobic006G143500 Sobic006G222400 Sobic006G222400 Sobic001G469100--Sobic006G222400 Sobic010G017000 Sobic010G017000 Sobic001G469100--Sobic010G017000 Sobic003G358300 Sobic003G358300 Sobic001G469100--Sobic003G358300 Sobic003G300900 Sobic003G300900 Sobic008G135500--Sobic003G300900 Sobic008G170500 Sobic008G170500 Sobic008G135500--Sobic008G170500 Sobic010G090100 Sobic010G090100 Sobic008G135500--Sobic010G090100 Sobic006G245500 Sobic006G245500 Sobic008G135500--Sobic006G245500 Sobic003G128700 Sobic003G128700 Sobic008G135500--Sobic003G128700 Sobic003G196000 Sobic003G196000 Sobic008G135500--Sobic003G196000 Sobic007G218100 Sobic007G218100 Sobic008G135500--Sobic007G218100 Sobic001G197800 Sobic001G197800 Sobic008G135500--Sobic001G197800 Sobic007G134800 Sobic007G134800 Sobic008G135500--Sobic007G134800 Sobic009G137500 Sobic009G137500 Sobic006G125200--Sobic009G137500 Sobic003G016200 Sobic003G016200 Sobic006G125200--Sobic003G016200 Sobic006G187000 Sobic006G187000 Sobic006G125200--Sobic006G187000 Sobic001G276600 Sobic001G276600 Sobic006G125200--Sobic001G276600 Sobic001G276800 Sobic001G276800 Sobic006G125200--Sobic001G276800 Sobic008G150500 Sobic008G150500 Sobic006G125200--Sobic008G150500 Sobic001G046400 Sobic001G046400 Sobic006G125200--Sobic001G046400 Sobic003G283900 Sobic003G283900 Sobic006G125200--Sobic003G283900 Sobic010G048700 Sobic010G048700 Sobic006G125200--Sobic010G048700 Sobic009G033800 Sobic009G033800 Sobic005G129700--Sobic009G033800 Sobic001G255600 Sobic001G255600 Sobic005G129700--Sobic001G255600 Sobic010G227200 Sobic010G227200 Sobic005G129700--Sobic010G227200 Sobic001G289900 Sobic001G289900 Sobic005G129700--Sobic001G289900 Sobic006G102900 Sobic006G102900 Sobic005G129700--Sobic006G102900 Sobic010G222100 Sobic010G222100 Sobic005G129700--Sobic010G222100 Sobic010G191000 Sobic010G191000 Sobic005G129700--Sobic010G191000 Sobic001G133300 Sobic001G133300 Sobic005G129700--Sobic001G133300 Sobic004G331200 Sobic004G331200 Sobic005G129700--Sobic004G331200 Sobic002G035600 Sobic002G035600 Sobic009G122600--Sobic002G035600 Sobic009G122600--Sobic006G066700 Sobic009G122600--Sobic006G125200 Sobic009G122600--Sobic009G137500 Sobic010G151700 Sobic010G151700 Sobic009G122600--Sobic010G151700 Sobic001G080200 Sobic001G080200 Sobic009G122600--Sobic001G080200 Sobic009G122600--Sobic003G412800 Sobic004G228400 Sobic004G228400 Sobic009G122600--Sobic004G228400 Sobic001G439000 Sobic001G439000 Sobic009G122600--Sobic001G439000 Sobic003G283600 Sobic003G283600 Sobic001G468500--Sobic003G283600 Sobic003G003700 Sobic003G003700 Sobic001G468500--Sobic003G003700 Sobic004G286700 Sobic004G286700 Sobic001G468500--Sobic004G286700 Sobic010G277300 Sobic010G277300 Sobic001G468500--Sobic010G277300 Sobic006G133700 Sobic006G133700 Sobic001G468500--Sobic006G133700 Sobic001G030400 Sobic001G030400 Sobic001G468500--Sobic001G030400 Sobic002G238500 Sobic002G238500 Sobic001G468500--Sobic002G238500 Sobic004G036800 Sobic004G036800 Sobic001G468500--Sobic004G036800 Sobic001G468500--Sobic004G331200 Sobic001G081100 Sobic001G081100 Sobic010G261000--Sobic001G081100 Sobic002G213500 Sobic002G213500 Sobic010G261000--Sobic002G213500 Sobic004G152300 Sobic004G152300 Sobic010G261000--Sobic004G152300 Sobic010G261000--Sobic005G129700 Sobic010G224400 Sobic010G224400 Sobic010G261000--Sobic010G224400 Sobic010G261000--Sobic006G133700 Sobic001G123300 Sobic001G123300 Sobic010G261000--Sobic001G123300 Sobic010G261000--Sobic001G080200 Sobic003G225500 Sobic003G225500 Sobic010G261000--Sobic003G225500 Sobic010G265900--Sobic006G200000 Sobic005G120500 Sobic005G120500 Sobic010G265900--Sobic005G120500 Sobic010G265900--Sobic006G102900 Sobic010G265900--Sobic005G080900 Sobic003G084300 Sobic003G084300 Sobic010G265900--Sobic003G084300 Sobic009G189200 Sobic009G189200 Sobic010G265900--Sobic009G189200 Sobic006G120700 Sobic006G120700 Sobic010G265900--Sobic006G120700 Sobic001G157800 Sobic001G157800 Sobic010G265900--Sobic001G157800 Sobic004G344500 Sobic004G344500 Sobic010G265900--Sobic004G344500
Octagon: transcription factors


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