Gene annotation
Transcriptome id Sobic.001G469100.1,Sobic.001G469100.3,Sobic.001G469100.2
Synonym IDD2, AtIDD2, Sb01g043960
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
ZOS7-06 - C2H2 zinc finger protein, expressed
UniProt C5WTW1
Pfam PF12171
Panther DB PTHR10593 PTHR10593:SF32
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66730 : C2H2-like zinc finger protein
RAP-DB (Rice) LOC_Os03g10140.1 : ZOS3-04 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a010195 , Zm00025a036023 , Zm00025a026121 , Zm00025a023015 , Zm00025a056789 , Zm00025a005649 , Zm00025a014537 , Zm00025a028450 , Zm00025a021475 , Zm00025a047929 , Zm00025a035820 , Zm00025a006887 , Zm00025a038400 , Zm00025a001203
Brachypodium KQK08378 , KQJ91417 , KQJ91416 , KQJ91415 , KQJ96746 , KQJ90469 , KQK03537 , KQK11405 , KQK23107 , KQK03154 , KQJ90470 , KQK00679
Barley HORVU4Hr1G070950.7 , HORVU4Hr1G070950.6 , HORVU4Hr1G070950.4 , HORVU4Hr1G070950.3 , HORVU4Hr1G070950.2 , HORVU4Hr1G070950.1 , HORVU4Hr1G070950.9 , HORVU4Hr1G070950.8 , HORVU3Hr1G049810.5 , HORVU3Hr1G049810.4 , HORVU3Hr1G049810.7 , HORVU3Hr1G049810.6 , HORVU3Hr1G049810.3 , HORVU3Hr1G049810.2 , HORVU4Hr1G070950.13 , HORVU4Hr1G070950.12 , HORVU4Hr1G070950.11 , HORVU4Hr1G070950.10
Wheat TraesCS3B02G237700 , TraesCS2B02G421100 , TraesCS5D02G364900 , TraesCS5D02G364900 , TraesCS4B02G262400 , TraesCS3D02G107300 , TraesCS2D02G400300 , TraesCS2D02G400300 , TraesCS2D02G400300 , TraesCS3A02G205800 , TraesCS3B02G497200 , TraesCS3A02G105100 , TraesCS3B02G123600 , TraesCS6B02G271000 , TraesCS6B02G271000 , TraesCS6B02G271000 , TraesCS3D02G171300 , TraesCS5A02G356100 , TraesCS6D02G116300 , TraesCS4A02G041400 , TraesCS2A02G403200 , TraesCS2A02G403200 , TraesCS3D02G449900 , TraesCS3A02G170700 , TraesCS6A02G254500 , TraesCS6D02G235800 , TraesCS5B02G358600 , TraesCS3B02G195900 , TraesCS6D02G235800 , TraesCS4D02G262500 , TraesCS3D02G209800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G166500 N-carbamoylputrescine amidohydrolase(PubMedID : 27325899)@Up-regulated by silicon application under drought stress(PubMedID : 24813726)@N-carbamoylputrescine amidase, putative, expressed K12251: N-carbamoylputrescine amidase
2 Sobic.003G319000 universal stress protein domain containing protein, putative, expressed -
3 Sobic.007G150000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
4 Sobic.003G023500 syntaxin, putative, expressed K08489: syntaxin 16
5 Sobic.004G297300 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05609: UCHL3, ubiquitin carboxyl-terminal hydrolase L3
6 Sobic.006G143500 expressed protein -
7 Sobic.006G222400 RNA recognition motif containing protein, putative, expressed -
8 Sobic.010G017000 RNA recognition motif containing protein, putative, expressed -
9 Sobic.003G358300 josephin, putative, expressed K11863: ATXN3, Ataxin-3
10 Sobic.004G032000 peptidase, T1 family, putative, expressed K02725: 20S proteasome subunit alpha 6
11 Sobic.010G238700 dynamin family protein, putative, expressed K12483: EH domain-containing protein 1
12 Sobic.008G130400 prefoldin, putative, expressed -
13 Sobic.007G148700 exo70 exocyst complex subunit, putative, expressed -
14 Sobic.003G217100 Yip1 domain containing protein, expressed -
15 Sobic.008G058700 metal cation transporter, putative, expressed -
16 Sobic.002G413400 ribosomal protein, putative, expressed K14842: ribosome biogenesis protein NSA2
17 Sobic.007G148800 cupin superfamily protein, putative, expressed K09705: uncharacterized protein
18 Sobic.002G159900 -(PubMedID : 26976818)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
19 Sobic.009G182200 domain of unknown function, DUF250 domain containing protein, expressed -
20 Sobic.009G191600 tesmin/TSO1-like CXC domain containing protein, expressed -


Gene co-expression network
sample Sobic001G469100 Sobic001G469100 Sobic004G166500 Sobic004G166500 Sobic001G469100--Sobic004G166500 Sobic003G319000 Sobic003G319000 Sobic001G469100--Sobic003G319000 Sobic007G150000 Sobic007G150000 Sobic001G469100--Sobic007G150000 Sobic003G023500 Sobic003G023500 Sobic001G469100--Sobic003G023500 Sobic004G297300 Sobic004G297300 Sobic001G469100--Sobic004G297300 Sobic006G143500 Sobic006G143500 Sobic001G469100--Sobic006G143500 Sobic006G222400 Sobic006G222400 Sobic001G469100--Sobic006G222400 Sobic010G017000 Sobic010G017000 Sobic001G469100--Sobic010G017000 Sobic003G358300 Sobic003G358300 Sobic001G469100--Sobic003G358300 Sobic004G166500--Sobic003G358300 Sobic001G201100 Sobic001G201100 Sobic004G166500--Sobic001G201100 Sobic001G066700 Sobic001G066700 Sobic004G166500--Sobic001G066700 Sobic003G368700 Sobic003G368700 Sobic004G166500--Sobic003G368700 Sobic008G130400 Sobic008G130400 Sobic004G166500--Sobic008G130400 Sobic002G218000 Sobic002G218000 Sobic004G166500--Sobic002G218000 Sobic006G239300 Sobic006G239300 Sobic004G166500--Sobic006G239300 Sobic001G505500 Sobic001G505500 Sobic004G166500--Sobic001G505500 Sobic009G070200 Sobic009G070200 Sobic004G166500--Sobic009G070200 Sobic001G196100 Sobic001G196100 Sobic003G319000--Sobic001G196100 Sobic003G092700 Sobic003G092700 Sobic003G319000--Sobic003G092700 Sobic009G182200 Sobic009G182200 Sobic003G319000--Sobic009G182200 Sobic001G026600 Sobic001G026600 Sobic003G319000--Sobic001G026600 Sobic003G252900 Sobic003G252900 Sobic003G319000--Sobic003G252900 Sobic003G312400 Sobic003G312400 Sobic003G319000--Sobic003G312400 Sobic001G418000 Sobic001G418000 Sobic003G319000--Sobic001G418000 Sobic003G410400 Sobic003G410400 Sobic003G319000--Sobic003G410400 Sobic003G319000--Sobic003G023500 Sobic004G222600 Sobic004G222600 Sobic007G150000--Sobic004G222600 Sobic003G340700 Sobic003G340700 Sobic007G150000--Sobic003G340700 Sobic007G150000--Sobic003G023500 Sobic004G123000 Sobic004G123000 Sobic007G150000--Sobic004G123000 Sobic010G238700 Sobic010G238700 Sobic007G150000--Sobic010G238700 Sobic004G159000 Sobic004G159000 Sobic007G150000--Sobic004G159000 Sobic001G013200 Sobic001G013200 Sobic007G150000--Sobic001G013200 Sobic003G217100 Sobic003G217100 Sobic007G150000--Sobic003G217100 Sobic007G150000--Sobic008G130400 Sobic003G023500--Sobic004G222600 Sobic003G023500--Sobic003G217100 Sobic002G214900 Sobic002G214900 Sobic003G023500--Sobic002G214900 Sobic001G214200 Sobic001G214200 Sobic003G023500--Sobic001G214200 Sobic001G409900 Sobic001G409900 Sobic003G023500--Sobic001G409900 Sobic009G191600 Sobic009G191600 Sobic003G023500--Sobic009G191600 Sobic003G023500--Sobic006G222400 Sobic004G054300 Sobic004G054300 Sobic003G023500--Sobic004G054300 Sobic002G376500 Sobic002G376500 Sobic003G023500--Sobic002G376500 Sobic004G297300--Sobic003G358300 Sobic003G362400 Sobic003G362400 Sobic004G297300--Sobic003G362400 Sobic009G117900 Sobic009G117900 Sobic004G297300--Sobic009G117900 Sobic004G297300--Sobic004G166500 Sobic004G138800 Sobic004G138800 Sobic004G297300--Sobic004G138800 Sobic003G072300 Sobic003G072300 Sobic004G297300--Sobic003G072300 Sobic001G483100 Sobic001G483100 Sobic004G297300--Sobic001G483100 Sobic004G297300--Sobic006G222400 Sobic004G297300--Sobic001G066700 Sobic004G032000 Sobic004G032000 Sobic006G143500--Sobic004G032000 Sobic001G285300 Sobic001G285300 Sobic006G143500--Sobic001G285300 Sobic002G044000 Sobic002G044000 Sobic006G143500--Sobic002G044000 Sobic001G517600 Sobic001G517600 Sobic006G143500--Sobic001G517600 Sobic001G402300 Sobic001G402300 Sobic006G143500--Sobic001G402300 Sobic001G532100 Sobic001G532100 Sobic006G143500--Sobic001G532100 Sobic006G143500--Sobic003G358300 Sobic001G126200 Sobic001G126200 Sobic006G143500--Sobic001G126200 Sobic001G402600 Sobic001G402600 Sobic006G143500--Sobic001G402600 Sobic006G222400--Sobic010G238700 Sobic006G222400--Sobic001G126200 Sobic006G222400--Sobic003G217100 Sobic008G132800 Sobic008G132800 Sobic006G222400--Sobic008G132800 Sobic008G137600 Sobic008G137600 Sobic006G222400--Sobic008G137600 Sobic002G428200 Sobic002G428200 Sobic006G222400--Sobic002G428200 Sobic001G105100 Sobic001G105100 Sobic006G222400--Sobic001G105100 Sobic004G224800 Sobic004G224800 Sobic006G222400--Sobic004G224800 Sobic006G222400--Sobic010G017000 Sobic010G017000--Sobic006G222400 Sobic006G217700 Sobic006G217700 Sobic010G017000--Sobic006G217700 Sobic003G021200 Sobic003G021200 Sobic010G017000--Sobic003G021200 Sobic003G052400 Sobic003G052400 Sobic010G017000--Sobic003G052400 Sobic009G160200 Sobic009G160200 Sobic010G017000--Sobic009G160200 Sobic003G038600 Sobic003G038600 Sobic010G017000--Sobic003G038600 Sobic007G059900 Sobic007G059900 Sobic010G017000--Sobic007G059900 Sobic001G283500 Sobic001G283500 Sobic010G017000--Sobic001G283500 Sobic009G008600 Sobic009G008600 Sobic010G017000--Sobic009G008600 Sobic003G358300--Sobic001G066700 Sobic006G231700 Sobic006G231700 Sobic003G358300--Sobic006G231700 Sobic005G111100 Sobic005G111100 Sobic003G358300--Sobic005G111100 Sobic003G358300--Sobic002G044000 Sobic003G358300--Sobic004G032000 Sobic003G358300--Sobic004G166500 Sobic002G386300 Sobic002G386300 Sobic003G358300--Sobic002G386300 Sobic007G163700 Sobic007G163700 Sobic003G358300--Sobic007G163700 Sobic009G191200 Sobic009G191200 Sobic003G358300--Sobic009G191200
Octagon: transcription factors


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