Gene annotation
Transcriptome id Sobic.007G216550.1
Synonym -
Functional annotation -
UniProt A0A1Z5RC63
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G397100 expressed protein -
2 Sobic.010G047500 AP2 domain containing protein, expressed -
3 Sobic.007G195800 uncharacterized protein family UPF0016 domain containing protein, expressed -
4 Sobic.009G247500 DUF623 domain containing protein, expressed -
5 Sobic.004G301300 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.007G144501 - -
7 Sobic.003G128700 flavin monooxygenase, putative, expressed -
8 Sobic.004G240100 phosphoenolpyruvate carboxylase kinase, putative, expressed -
9 Sobic.001G025101 - -
10 Sobic.006G066700 OsFBLD2 - F-box, LRR and FBD domain containing protein, expressed -
11 Sobic.002G040900 VQ domain containing protein, putative, expressed -
12 Sobic.008G020100 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.008G135500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G279100 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
15 Sobic.001G054500 expressed protein -
16 Sobic.006G137800 expressed protein -
17 Sobic.006G245500 down-regulated TF in developmental senescence(PubMedID : 27586543)@AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
18 Sobic.007G008000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@invertase/pectin methylesterase inhibitor family protein, putative, expressed -
19 Sobic.001G031700 nucleobase-ascorbate transporter, putative, expressed -
20 Sobic.009G079925 - -


Gene co-expression network
sample Sobic007G216550 Sobic007G216550 Sobic001G397100 Sobic001G397100 Sobic007G216550--Sobic001G397100 Sobic010G047500 Sobic010G047500 Sobic007G216550--Sobic010G047500 Sobic007G195800 Sobic007G195800 Sobic007G216550--Sobic007G195800 Sobic009G247500 Sobic009G247500 Sobic007G216550--Sobic009G247500 Sobic004G301300 Sobic004G301300 Sobic007G216550--Sobic004G301300 Sobic007G144501 Sobic007G144501 Sobic007G216550--Sobic007G144501 Sobic003G128700 Sobic003G128700 Sobic007G216550--Sobic003G128700 Sobic004G240100 Sobic004G240100 Sobic007G216550--Sobic004G240100 Sobic001G025101 Sobic001G025101 Sobic007G216550--Sobic001G025101 Sobic006G245500 Sobic006G245500 Sobic001G397100--Sobic006G245500 Sobic002G242300 Sobic002G242300 Sobic001G397100--Sobic002G242300 Sobic009G021600 Sobic009G021600 Sobic001G397100--Sobic009G021600 Sobic001G397100--Sobic003G128700 Sobic001G397100--Sobic004G301300 Sobic003G093700 Sobic003G093700 Sobic001G397100--Sobic003G093700 Sobic003G300900 Sobic003G300900 Sobic001G397100--Sobic003G300900 Sobic007G166000 Sobic007G166000 Sobic001G397100--Sobic007G166000 Sobic008G170500 Sobic008G170500 Sobic001G397100--Sobic008G170500 Sobic010G047500--Sobic007G216550 Sobic002G220100 Sobic002G220100 Sobic010G047500--Sobic002G220100 Sobic010G047500--Sobic007G195800 Sobic010G047500--Sobic007G144501 Sobic003G289601 Sobic003G289601 Sobic010G047500--Sobic003G289601 Sobic010G047500--Sobic004G240100 Sobic002G074200 Sobic002G074200 Sobic010G047500--Sobic002G074200 Sobic009G179400 Sobic009G179400 Sobic010G047500--Sobic009G179400 Sobic001G054500 Sobic001G054500 Sobic010G047500--Sobic001G054500 Sobic006G137800 Sobic006G137800 Sobic007G195800--Sobic006G137800 Sobic008G139600 Sobic008G139600 Sobic007G195800--Sobic008G139600 Sobic001G502900 Sobic001G502900 Sobic007G195800--Sobic001G502900 Sobic002G389400 Sobic002G389400 Sobic007G195800--Sobic002G389400 Sobic006G191800 Sobic006G191800 Sobic007G195800--Sobic006G191800 Sobic002G323300 Sobic002G323300 Sobic007G195800--Sobic002G323300 Sobic004G065500 Sobic004G065500 Sobic007G195800--Sobic004G065500 Sobic001G115300 Sobic001G115300 Sobic007G195800--Sobic001G115300 Sobic005G113300 Sobic005G113300 Sobic007G195800--Sobic005G113300 Sobic001G256200 Sobic001G256200 Sobic009G247500--Sobic001G256200 Sobic009G247500--Sobic007G144501 Sobic002G044800 Sobic002G044800 Sobic009G247500--Sobic002G044800 Sobic002G040900 Sobic002G040900 Sobic009G247500--Sobic002G040900 Sobic009G247500--Sobic001G054500 Sobic009G247500--Sobic007G216550 Sobic004G148100 Sobic004G148100 Sobic009G247500--Sobic004G148100 Sobic006G113500 Sobic006G113500 Sobic009G247500--Sobic006G113500 Sobic009G009700 Sobic009G009700 Sobic009G247500--Sobic009G009700 Sobic004G203700 Sobic004G203700 Sobic004G301300--Sobic004G203700 Sobic003G027400 Sobic003G027400 Sobic004G301300--Sobic003G027400 Sobic001G295200 Sobic001G295200 Sobic004G301300--Sobic001G295200 Sobic005G107900 Sobic005G107900 Sobic004G301300--Sobic005G107900 Sobic007G008100 Sobic007G008100 Sobic004G301300--Sobic007G008100 Sobic009G154200 Sobic009G154200 Sobic004G301300--Sobic009G154200 Sobic001G169500 Sobic001G169500 Sobic004G301300--Sobic001G169500 Sobic009G159400 Sobic009G159400 Sobic004G301300--Sobic009G159400 Sobic002G329800 Sobic002G329800 Sobic004G301300--Sobic002G329800 Sobic007G144501--Sobic001G256200 Sobic002G042000 Sobic002G042000 Sobic007G144501--Sobic002G042000 Sobic007G144501--Sobic002G040900 Sobic002G093700 Sobic002G093700 Sobic007G144501--Sobic002G093700 Sobic007G144501--Sobic001G054500 Sobic004G045400 Sobic004G045400 Sobic007G144501--Sobic004G045400 Sobic002G115025 Sobic002G115025 Sobic007G144501--Sobic002G115025 Sobic006G234900 Sobic006G234900 Sobic007G144501--Sobic006G234900 Sobic006G101300 Sobic006G101300 Sobic007G144501--Sobic006G101300 Sobic003G128700--Sobic003G300900 Sobic003G128700--Sobic006G245500 Sobic003G128700--Sobic008G170500 Sobic003G386800 Sobic003G386800 Sobic003G128700--Sobic003G386800 Sobic003G128700--Sobic001G397100 Sobic008G135500 Sobic008G135500 Sobic003G128700--Sobic008G135500 Sobic010G090100 Sobic010G090100 Sobic003G128700--Sobic010G090100 Sobic003G128700--Sobic002G242300 Sobic008G034300 Sobic008G034300 Sobic003G128700--Sobic008G034300 Sobic010G211600 Sobic010G211600 Sobic004G240100--Sobic010G211600 Sobic004G240600 Sobic004G240600 Sobic004G240100--Sobic004G240600 Sobic006G260300 Sobic006G260300 Sobic004G240100--Sobic006G260300 Sobic001G197000 Sobic001G197000 Sobic004G240100--Sobic001G197000 Sobic004G064900 Sobic004G064900 Sobic004G240100--Sobic004G064900 Sobic009G196400 Sobic009G196400 Sobic004G240100--Sobic009G196400 Sobic004G252100 Sobic004G252100 Sobic004G240100--Sobic004G252100 Sobic008G156500 Sobic008G156500 Sobic004G240100--Sobic008G156500 Sobic006G190700 Sobic006G190700 Sobic004G240100--Sobic006G190700 Sobic001G025300 Sobic001G025300 Sobic001G025101--Sobic001G025300 Sobic002G416600 Sobic002G416600 Sobic001G025101--Sobic002G416600 Sobic003G088500 Sobic003G088500 Sobic001G025101--Sobic003G088500 Sobic005G051200 Sobic005G051200 Sobic001G025101--Sobic005G051200 Sobic003G087300 Sobic003G087300 Sobic001G025101--Sobic003G087300 Sobic004G166700 Sobic004G166700 Sobic001G025101--Sobic004G166700 Sobic004G245500 Sobic004G245500 Sobic001G025101--Sobic004G245500 Sobic010G044400 Sobic010G044400 Sobic001G025101--Sobic010G044400 Sobic003G345100 Sobic003G345100 Sobic001G025101--Sobic003G345100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.