Gene annotation
Transcriptome id Sobic.010G047500.1
Synonym CRF4
Functional annotation AP2 domain containing protein, expressed
UniProt C5Z4H5
Pfam PF00847
Panther DB PTHR31194 PTHR31194:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G27950 : cytokinin response factor 4
RAP-DB (Rice) LOC_Os06g06540.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a046712 , Zm00025a049953 , Zm00025a037299 , Zm00025a000949
Brachypodium KQK23284 , KQJ98629 , KQJ95603 , KQK12503 , KQK09756 , KQJ94686
Barley HORVU6Hr1G060220.6 , HORVU6Hr1G060220.7 , HORVU6Hr1G060220.4 , HORVU6Hr1G060220.5 , HORVU6Hr1G060220.3 , HORVU6Hr1G060220.2 , HORVU6Hr1G060220.1 , HORVU4Hr1G077310.1 , HORVU4Hr1G077310.2 , HORVU4Hr1G077310.3 , HORVU4Hr1G077310.4 , HORVU4Hr1G077310.7 , HORVU4Hr1G077310.8 , HORVU5Hr1G058270.1 , HORVU5Hr1G058270.2 , HORVU5Hr1G058270.5 , HORVU5Hr1G058270.4 , HORVU5Hr1G058270.6 , HORVU4Hr1G077310.5
Wheat TraesCS5D02G200900 , TraesCS4B02G299500 , TraesCS4A02G005600 , TraesCS5B02G193200 , TraesCS4B02G299400 , TraesCS4D02G298400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G216550 - -
2 Sobic.002G220100 expressed protein -
3 Sobic.007G195800 uncharacterized protein family UPF0016 domain containing protein, expressed -
4 Sobic.007G144501 - -
5 Sobic.003G289601 - -
6 Sobic.004G240100 phosphoenolpyruvate carboxylase kinase, putative, expressed -
7 Sobic.002G074200 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
8 Sobic.009G179400 expressed protein -
9 Sobic.001G054500 expressed protein -
10 Sobic.006G070298 Cell wall invertase enzyme activity(PubMedID : 17293002) K01193: INV, beta-fructofuranosidase
11 Sobic.006G137800 expressed protein -
12 Sobic.001G310600 expressed protein -
13 Sobic.001G371900 copper/zinc superoxide dismutase(PubMedID : 23915383)@copper/zinc superoxide dismutase, putative, expressed K04565: superoxide dismutase, Cu-Zn family
14 Sobic.004G315300 DNA-3-methyladenine glycosylase, putative, expressed K03652: DNA-3-methyladenine glycosylase
15 Sobic.007G008100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
16 Sobic.004G239200 transcription factor-related, putative, expressed K15199: general transcription factor 3C polypeptide 1
17 Sobic.003G375100 snRK1-interacting protein 1, putative, expressed -
18 Sobic.007G008000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@invertase/pectin methylesterase inhibitor family protein, putative, expressed -
19 Sobic.006G274400 harpin-induced protein 1 domain containing protein, expressed -
20 Sobic.002G040900 VQ domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G047500 Sobic010G047500 Sobic007G216550 Sobic007G216550 Sobic010G047500--Sobic007G216550 Sobic002G220100 Sobic002G220100 Sobic010G047500--Sobic002G220100 Sobic007G195800 Sobic007G195800 Sobic010G047500--Sobic007G195800 Sobic007G144501 Sobic007G144501 Sobic010G047500--Sobic007G144501 Sobic003G289601 Sobic003G289601 Sobic010G047500--Sobic003G289601 Sobic004G240100 Sobic004G240100 Sobic010G047500--Sobic004G240100 Sobic002G074200 Sobic002G074200 Sobic010G047500--Sobic002G074200 Sobic009G179400 Sobic009G179400 Sobic010G047500--Sobic009G179400 Sobic001G054500 Sobic001G054500 Sobic010G047500--Sobic001G054500 Sobic001G397100 Sobic001G397100 Sobic007G216550--Sobic001G397100 Sobic007G216550--Sobic010G047500 Sobic007G216550--Sobic007G195800 Sobic009G247500 Sobic009G247500 Sobic007G216550--Sobic009G247500 Sobic004G301300 Sobic004G301300 Sobic007G216550--Sobic004G301300 Sobic007G216550--Sobic007G144501 Sobic003G128700 Sobic003G128700 Sobic007G216550--Sobic003G128700 Sobic007G216550--Sobic004G240100 Sobic001G025101 Sobic001G025101 Sobic007G216550--Sobic001G025101 Sobic001G282900 Sobic001G282900 Sobic002G220100--Sobic001G282900 Sobic009G176500 Sobic009G176500 Sobic002G220100--Sobic009G176500 Sobic004G315000 Sobic004G315000 Sobic002G220100--Sobic004G315000 Sobic005G033100 Sobic005G033100 Sobic002G220100--Sobic005G033100 Sobic010G216400 Sobic010G216400 Sobic002G220100--Sobic010G216400 Sobic002G329900 Sobic002G329900 Sobic002G220100--Sobic002G329900 Sobic002G173200 Sobic002G173200 Sobic002G220100--Sobic002G173200 Sobic001G047800 Sobic001G047800 Sobic002G220100--Sobic001G047800 Sobic003G296800 Sobic003G296800 Sobic002G220100--Sobic003G296800 Sobic006G137800 Sobic006G137800 Sobic007G195800--Sobic006G137800 Sobic008G139600 Sobic008G139600 Sobic007G195800--Sobic008G139600 Sobic001G502900 Sobic001G502900 Sobic007G195800--Sobic001G502900 Sobic002G389400 Sobic002G389400 Sobic007G195800--Sobic002G389400 Sobic006G191800 Sobic006G191800 Sobic007G195800--Sobic006G191800 Sobic002G323300 Sobic002G323300 Sobic007G195800--Sobic002G323300 Sobic004G065500 Sobic004G065500 Sobic007G195800--Sobic004G065500 Sobic001G115300 Sobic001G115300 Sobic007G195800--Sobic001G115300 Sobic005G113300 Sobic005G113300 Sobic007G195800--Sobic005G113300 Sobic001G256200 Sobic001G256200 Sobic007G144501--Sobic001G256200 Sobic002G042000 Sobic002G042000 Sobic007G144501--Sobic002G042000 Sobic002G040900 Sobic002G040900 Sobic007G144501--Sobic002G040900 Sobic002G093700 Sobic002G093700 Sobic007G144501--Sobic002G093700 Sobic007G144501--Sobic001G054500 Sobic004G045400 Sobic004G045400 Sobic007G144501--Sobic004G045400 Sobic002G115025 Sobic002G115025 Sobic007G144501--Sobic002G115025 Sobic006G234900 Sobic006G234900 Sobic007G144501--Sobic006G234900 Sobic006G101300 Sobic006G101300 Sobic007G144501--Sobic006G101300 Sobic006G261900 Sobic006G261900 Sobic003G289601--Sobic006G261900 Sobic007G184001 Sobic007G184001 Sobic003G289601--Sobic007G184001 Sobic003G289601--Sobic001G047800 Sobic006G262300 Sobic006G262300 Sobic003G289601--Sobic006G262300 Sobic003G289601--Sobic003G296800 Sobic009G173500 Sobic009G173500 Sobic003G289601--Sobic009G173500 Sobic003G289601--Sobic002G329900 Sobic009G223300 Sobic009G223300 Sobic003G289601--Sobic009G223300 Sobic002G309700 Sobic002G309700 Sobic003G289601--Sobic002G309700 Sobic010G211600 Sobic010G211600 Sobic004G240100--Sobic010G211600 Sobic004G240600 Sobic004G240600 Sobic004G240100--Sobic004G240600 Sobic006G260300 Sobic006G260300 Sobic004G240100--Sobic006G260300 Sobic001G197000 Sobic001G197000 Sobic004G240100--Sobic001G197000 Sobic004G064900 Sobic004G064900 Sobic004G240100--Sobic004G064900 Sobic009G196400 Sobic009G196400 Sobic004G240100--Sobic009G196400 Sobic004G252100 Sobic004G252100 Sobic004G240100--Sobic004G252100 Sobic008G156500 Sobic008G156500 Sobic004G240100--Sobic008G156500 Sobic006G190700 Sobic006G190700 Sobic004G240100--Sobic006G190700 Sobic005G080900 Sobic005G080900 Sobic002G074200--Sobic005G080900 Sobic003G160700 Sobic003G160700 Sobic002G074200--Sobic003G160700 Sobic002G372400 Sobic002G372400 Sobic002G074200--Sobic002G372400 Sobic006G159600 Sobic006G159600 Sobic002G074200--Sobic006G159600 Sobic006G067800 Sobic006G067800 Sobic002G074200--Sobic006G067800 Sobic003G078200 Sobic003G078200 Sobic002G074200--Sobic003G078200 Sobic003G436700 Sobic003G436700 Sobic002G074200--Sobic003G436700 Sobic010G076400 Sobic010G076400 Sobic002G074200--Sobic010G076400 Sobic002G074200--Sobic006G137800 Sobic004G146000 Sobic004G146000 Sobic009G179400--Sobic004G146000 Sobic003G273000 Sobic003G273000 Sobic009G179400--Sobic003G273000 Sobic009G179500 Sobic009G179500 Sobic009G179400--Sobic009G179500 Sobic001G508466 Sobic001G508466 Sobic009G179400--Sobic001G508466 Sobic009G063900 Sobic009G063900 Sobic009G179400--Sobic009G063900 Sobic001G405500 Sobic001G405500 Sobic009G179400--Sobic001G405500 Sobic001G149800 Sobic001G149800 Sobic009G179400--Sobic001G149800 Sobic003G148600 Sobic003G148600 Sobic009G179400--Sobic003G148600 Sobic003G377100 Sobic003G377100 Sobic009G179400--Sobic003G377100 Sobic001G054500--Sobic002G042000 Sobic007G008100 Sobic007G008100 Sobic001G054500--Sobic007G008100 Sobic001G054500--Sobic002G040900 Sobic001G054500--Sobic001G256200 Sobic003G364300 Sobic003G364300 Sobic001G054500--Sobic003G364300 Sobic004G148100 Sobic004G148100 Sobic001G054500--Sobic004G148100 Sobic006G113500 Sobic006G113500 Sobic001G054500--Sobic006G113500 Sobic007G008000 Sobic007G008000 Sobic001G054500--Sobic007G008000 Sobic009G009700 Sobic009G009700 Sobic001G054500--Sobic009G009700
Octagon: transcription factors


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