Gene annotation
Transcriptome id Sobic.008G186800.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PEK3
Pfam -
Panther DB PTHR33109 PTHR33109:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G37810 : -
RAP-DB (Rice) LOC_Os03g46930.1 : expressed protein
MaizeGDB (Corn) Zm00025a004852
Brachypodium KQK13827
Barley HORVU4Hr1G003230.4 , HORVU4Hr1G003230.5 , HORVU4Hr1G003230.6 , HORVU4Hr1G003230.1 , HORVU4Hr1G003230.2 , HORVU4Hr1G003230.3
Wheat TraesCS4D02G019400 , TraesCS4B02G021700
Populus -


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cDNA sequences
Sobic.008G186800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G008701 - K10845: TTDA, GTF2H5, TFIIH basal transcription factor complex TTD-A subunit
2 Sobic.010G190200 polygalacturonase, putative, expressed -
3 Sobic.002G232600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
4 Sobic.010G167100 OsFBX378 - F-box domain containing protein, expressed -
5 Sobic.010G048800 expressed protein -
6 Sobic.001G110100 expressed protein -
7 Sobic.002G183800 L-ascorbate oxidase precursor, putative, expressed -
8 Sobic.010G062200 expressed protein -
9 Sobic.001G310200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.004G324500 expressed protein -
11 Sobic.001G511600 expressed protein -
12 Sobic.002G129100 LTPL27 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
13 Sobic.003G382400 MLO domain containing protein, putative, expressed K08472: mlo protein
14 Sobic.006G127750 - -
15 Sobic.006G092300 ZOS4-06 - C2H2 zinc finger protein, expressed -
16 Sobic.006G117900 brevis radix, putative, expressed -
17 Sobic.003G011700 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed K00606: 3-methyl-2-oxobutanoate hydroxymethyltransferase
18 Sobic.006G079500 AMP-binding domain containing protein, expressed -
19 Sobic.002G380800 - -
20 Sobic.001G341700 "GS3(Ortholog in rice:Mao et al., 2010(PubMedID : 31659843)@ Li et al., 2010)"(PubMedID : 32497208)@keratin-associated protein 5-4, putative, expressed -


Gene co-expression network
sample Sobic008G186800 Sobic008G186800 Sobic009G008701 Sobic009G008701 Sobic008G186800--Sobic009G008701 Sobic010G190200 Sobic010G190200 Sobic008G186800--Sobic010G190200 Sobic002G232600 Sobic002G232600 Sobic008G186800--Sobic002G232600 Sobic010G167100 Sobic010G167100 Sobic008G186800--Sobic010G167100 Sobic010G048800 Sobic010G048800 Sobic008G186800--Sobic010G048800 Sobic001G110100 Sobic001G110100 Sobic008G186800--Sobic001G110100 Sobic002G183800 Sobic002G183800 Sobic008G186800--Sobic002G183800 Sobic010G062200 Sobic010G062200 Sobic008G186800--Sobic010G062200 Sobic001G310200 Sobic001G310200 Sobic008G186800--Sobic001G310200 Sobic002G150100 Sobic002G150100 Sobic009G008701--Sobic002G150100 Sobic003G344050 Sobic003G344050 Sobic009G008701--Sobic003G344050 Sobic002G220800 Sobic002G220800 Sobic009G008701--Sobic002G220800 Sobic007G108200 Sobic007G108200 Sobic009G008701--Sobic007G108200 Sobic003G249050 Sobic003G249050 Sobic009G008701--Sobic003G249050 Sobic002G195500 Sobic002G195500 Sobic009G008701--Sobic002G195500 Sobic004G061701 Sobic004G061701 Sobic009G008701--Sobic004G061701 Sobic010G190200--Sobic001G110100 Sobic010G226300 Sobic010G226300 Sobic010G190200--Sobic010G226300 Sobic010G190200--Sobic010G048800 Sobic006G079500 Sobic006G079500 Sobic010G190200--Sobic006G079500 Sobic003G382400 Sobic003G382400 Sobic010G190200--Sobic003G382400 Sobic010G190200--Sobic010G062200 Sobic004G324500 Sobic004G324500 Sobic010G190200--Sobic004G324500 Sobic001G341700 Sobic001G341700 Sobic010G190200--Sobic001G341700 Sobic003G011700 Sobic003G011700 Sobic010G190200--Sobic003G011700 Sobic002G232600--Sobic008G186800 Sobic010G139400 Sobic010G139400 Sobic002G232600--Sobic010G139400 Sobic006G190600 Sobic006G190600 Sobic002G232600--Sobic006G190600 Sobic003G407001 Sobic003G407001 Sobic002G232600--Sobic003G407001 Sobic009G247500 Sobic009G247500 Sobic002G232600--Sobic009G247500 Sobic002G232600--Sobic009G008701 Sobic007G065800 Sobic007G065800 Sobic002G232600--Sobic007G065800 Sobic010G211600 Sobic010G211600 Sobic002G232600--Sobic010G211600 Sobic003G117500 Sobic003G117500 Sobic002G232600--Sobic003G117500 Sobic001G245200 Sobic001G245200 Sobic010G167100--Sobic001G245200 Sobic010G167100--Sobic008G186800 Sobic010G167100--Sobic009G008701 Sobic010G167100--Sobic003G249050 Sobic006G053050 Sobic006G053050 Sobic010G167100--Sobic006G053050 Sobic010G167100--Sobic002G150100 Sobic010G167100--Sobic003G344050 Sobic005G218000 Sobic005G218000 Sobic010G048800--Sobic005G218000 Sobic007G076100 Sobic007G076100 Sobic010G048800--Sobic007G076100 Sobic010G048800--Sobic001G341700 Sobic002G312200 Sobic002G312200 Sobic010G048800--Sobic002G312200 Sobic010G048200 Sobic010G048200 Sobic010G048800--Sobic010G048200 Sobic004G318800 Sobic004G318800 Sobic010G048800--Sobic004G318800 Sobic006G089700 Sobic006G089700 Sobic010G048800--Sobic006G089700 Sobic010G048800--Sobic006G079500 Sobic003G178500 Sobic003G178500 Sobic010G048800--Sobic003G178500 Sobic009G074900 Sobic009G074900 Sobic001G110100--Sobic009G074900 Sobic003G016000 Sobic003G016000 Sobic001G110100--Sobic003G016000 Sobic010G053300 Sobic010G053300 Sobic001G110100--Sobic010G053300 Sobic001G110100--Sobic010G048200 Sobic001G110100--Sobic010G062200 Sobic009G075000 Sobic009G075000 Sobic001G110100--Sobic009G075000 Sobic003G088200 Sobic003G088200 Sobic001G110100--Sobic003G088200 Sobic002G402233 Sobic002G402233 Sobic001G110100--Sobic002G402233 Sobic002G173300 Sobic002G173300 Sobic001G110100--Sobic002G173300 Sobic005G110900 Sobic005G110900 Sobic002G183800--Sobic005G110900 Sobic002G183800--Sobic003G382400 Sobic009G037300 Sobic009G037300 Sobic002G183800--Sobic009G037300 Sobic001G266100 Sobic001G266100 Sobic002G183800--Sobic001G266100 Sobic002G353100 Sobic002G353100 Sobic002G183800--Sobic002G353100 Sobic008G012600 Sobic008G012600 Sobic002G183800--Sobic008G012600 Sobic003G090650 Sobic003G090650 Sobic002G183800--Sobic003G090650 Sobic006G042500 Sobic006G042500 Sobic002G183800--Sobic006G042500 Sobic002G023700 Sobic002G023700 Sobic002G183800--Sobic002G023700 Sobic010G259400 Sobic010G259400 Sobic010G062200--Sobic010G259400 Sobic010G062200--Sobic009G075000 Sobic010G062200--Sobic009G074900 Sobic010G062200--Sobic010G053300 Sobic010G062200--Sobic003G088200 Sobic010G062200--Sobic003G016000 Sobic003G263800 Sobic003G263800 Sobic010G062200--Sobic003G263800 Sobic008G032400 Sobic008G032400 Sobic010G062200--Sobic008G032400 Sobic002G427550 Sobic002G427550 Sobic010G062200--Sobic002G427550 Sobic001G310200--Sobic001G110100 Sobic002G129100 Sobic002G129100 Sobic001G310200--Sobic002G129100 Sobic004G118100 Sobic004G118100 Sobic001G310200--Sobic004G118100 Sobic001G310200--Sobic010G062200 Sobic004G227900 Sobic004G227900 Sobic001G310200--Sobic004G227900 Sobic008G004200 Sobic008G004200 Sobic001G310200--Sobic008G004200 Sobic001G310200--Sobic010G053300 Sobic005G054800 Sobic005G054800 Sobic001G310200--Sobic005G054800 Sobic006G137000 Sobic006G137000 Sobic001G310200--Sobic006G137000
Octagon: transcription factors


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