Gene annotation
Transcriptome id Sobic.001G440500.1
Synonym Sb01g041400
Functional annotation protein kinase family protein, putative, expressed
UniProt C5WRK0
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF107
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G77280 : Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
RAP-DB (Rice) LOC_Os03g13820.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a001514 , Zm00025a054075
Brachypodium PNT77771 , KQK22630 , KQK22631
Barley HORVU4Hr1G064010.7 , HORVU4Hr1G064010.6 , HORVU4Hr1G064010.5 , HORVU4Hr1G064010.4 , HORVU4Hr1G064010.3 , HORVU4Hr1G064010.2 , HORVU4Hr1G064010.9 , HORVU4Hr1G064010.8 , HORVU4Hr1G064010.14 , HORVU4Hr1G064010.13 , HORVU4Hr1G064010.12 , HORVU4Hr1G064010.11 , HORVU4Hr1G064010.10
Wheat TraesCS4A02G072300 , TraesCS4A02G072300 , TraesCS4D02G229100 , TraesCS4D02G229100 , TraesCS4D02G229100 , TraesCS4D02G229100 , TraesCS4B02G228200 , TraesCS4B02G228200 , TraesCS4B02G228200
Populus -


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cDNA sequences
Sobic.001G440500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G410700 exostosin family domain containing protein, expressed -
2 Sobic.002G276600 endoglucanase, putative, expressed -
3 Sobic.001G099100 endoglucanase, putative, expressed K01179: endoglucanase
4 Sobic.003G098500 - -
5 Sobic.008G132300 boron transporter protein, putative, expressed -
6 Sobic.005G166500 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@allergen-related, putative, expressed -
7 Sobic.010G078300 leaf senescence related protein, putative, expressed -
8 Sobic.004G262600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
9 Sobic.006G215000 PAZ domain-containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
10 Sobic.001G195000 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
11 Sobic.009G173200 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
12 Sobic.002G092901 - -
13 Sobic.004G261200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.010G199700 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
15 Sobic.009G194200 CSLC7 - cellulose synthase-like family C, expressed -
16 Sobic.001G463800 expressed protein -
17 Sobic.003G389100 formin-like protein 1 precursor, putative, expressed -
18 Sobic.004G051300 galactosyltransferase, putative, expressed -
19 Sobic.003G006900 microtubule associated protein, putative, expressed -
20 Sobic.004G296200 inactive receptor kinase At2g26730 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G440500 Sobic001G440500 Sobic003G410700 Sobic003G410700 Sobic001G440500--Sobic003G410700 Sobic002G276600 Sobic002G276600 Sobic001G440500--Sobic002G276600 Sobic001G099100 Sobic001G099100 Sobic001G440500--Sobic001G099100 Sobic003G098500 Sobic003G098500 Sobic001G440500--Sobic003G098500 Sobic008G132300 Sobic008G132300 Sobic001G440500--Sobic008G132300 Sobic005G166500 Sobic005G166500 Sobic001G440500--Sobic005G166500 Sobic010G078300 Sobic010G078300 Sobic001G440500--Sobic010G078300 Sobic004G262600 Sobic004G262600 Sobic001G440500--Sobic004G262600 Sobic006G215000 Sobic006G215000 Sobic001G440500--Sobic006G215000 Sobic003G410700--Sobic004G262600 Sobic004G261200 Sobic004G261200 Sobic003G410700--Sobic004G261200 Sobic009G194200 Sobic009G194200 Sobic003G410700--Sobic009G194200 Sobic003G389100 Sobic003G389100 Sobic003G410700--Sobic003G389100 Sobic004G296200 Sobic004G296200 Sobic003G410700--Sobic004G296200 Sobic003G094600 Sobic003G094600 Sobic003G410700--Sobic003G094600 Sobic003G410700--Sobic001G440500 Sobic003G223900 Sobic003G223900 Sobic003G410700--Sobic003G223900 Sobic001G436100 Sobic001G436100 Sobic003G410700--Sobic001G436100 Sobic009G061000 Sobic009G061000 Sobic002G276600--Sobic009G061000 Sobic001G437500 Sobic001G437500 Sobic002G276600--Sobic001G437500 Sobic002G276600--Sobic001G099100 Sobic008G174900 Sobic008G174900 Sobic002G276600--Sobic008G174900 Sobic006G267500 Sobic006G267500 Sobic002G276600--Sobic006G267500 Sobic004G243800 Sobic004G243800 Sobic002G276600--Sobic004G243800 Sobic009G026101 Sobic009G026101 Sobic002G276600--Sobic009G026101 Sobic004G051300 Sobic004G051300 Sobic002G276600--Sobic004G051300 Sobic010G090500 Sobic010G090500 Sobic002G276600--Sobic010G090500 Sobic001G099100--Sobic004G051300 Sobic002G118700 Sobic002G118700 Sobic001G099100--Sobic002G118700 Sobic001G099100--Sobic002G276600 Sobic002G075500 Sobic002G075500 Sobic001G099100--Sobic002G075500 Sobic001G099100--Sobic010G090500 Sobic001G099100--Sobic009G026101 Sobic009G125900 Sobic009G125900 Sobic001G099100--Sobic009G125900 Sobic003G353400 Sobic003G353400 Sobic001G099100--Sobic003G353400 Sobic009G079100 Sobic009G079100 Sobic001G099100--Sobic009G079100 Sobic003G098500--Sobic002G276600 Sobic003G098500--Sobic001G099100 Sobic009G226900 Sobic009G226900 Sobic003G098500--Sobic009G226900 Sobic003G098500--Sobic009G026101 Sobic008G055000 Sobic008G055000 Sobic003G098500--Sobic008G055000 Sobic003G098500--Sobic008G174900 Sobic003G098500--Sobic006G267500 Sobic003G098500--Sobic009G061000 Sobic009G153800 Sobic009G153800 Sobic003G098500--Sobic009G153800 Sobic008G132300--Sobic006G267500 Sobic007G084200 Sobic007G084200 Sobic008G132300--Sobic007G084200 Sobic001G183600 Sobic001G183600 Sobic008G132300--Sobic001G183600 Sobic007G166800 Sobic007G166800 Sobic008G132300--Sobic007G166800 Sobic007G145000 Sobic007G145000 Sobic008G132300--Sobic007G145000 Sobic001G477400 Sobic001G477400 Sobic008G132300--Sobic001G477400 Sobic009G206500 Sobic009G206500 Sobic008G132300--Sobic009G206500 Sobic008G132300--Sobic002G276600 Sobic005G055600 Sobic005G055600 Sobic008G132300--Sobic005G055600 Sobic008G070700 Sobic008G070700 Sobic005G166500--Sobic008G070700 Sobic009G099150 Sobic009G099150 Sobic005G166500--Sobic009G099150 Sobic005G166500--Sobic007G084200 Sobic002G317700 Sobic002G317700 Sobic005G166500--Sobic002G317700 Sobic010G092400 Sobic010G092400 Sobic005G166500--Sobic010G092400 Sobic007G087800 Sobic007G087800 Sobic005G166500--Sobic007G087800 Sobic009G219500 Sobic009G219500 Sobic005G166500--Sobic009G219500 Sobic006G014400 Sobic006G014400 Sobic005G166500--Sobic006G014400 Sobic006G163300 Sobic006G163300 Sobic005G166500--Sobic006G163300 Sobic010G022000 Sobic010G022000 Sobic010G078300--Sobic010G022000 Sobic007G000700 Sobic007G000700 Sobic010G078300--Sobic007G000700 Sobic002G314800 Sobic002G314800 Sobic010G078300--Sobic002G314800 Sobic001G518000 Sobic001G518000 Sobic010G078300--Sobic001G518000 Sobic010G211800 Sobic010G211800 Sobic010G078300--Sobic010G211800 Sobic010G078300--Sobic010G092400 Sobic009G216300 Sobic009G216300 Sobic010G078300--Sobic009G216300 Sobic003G401800 Sobic003G401800 Sobic010G078300--Sobic003G401800 Sobic005G062600 Sobic005G062600 Sobic010G078300--Sobic005G062600 Sobic004G262600--Sobic003G410700 Sobic004G262600--Sobic003G223900 Sobic004G262600--Sobic004G261200 Sobic009G188800 Sobic009G188800 Sobic004G262600--Sobic009G188800 Sobic003G399000 Sobic003G399000 Sobic004G262600--Sobic003G399000 Sobic004G262600--Sobic009G194200 Sobic001G217300 Sobic001G217300 Sobic004G262600--Sobic001G217300 Sobic001G139300 Sobic001G139300 Sobic004G262600--Sobic001G139300 Sobic003G017200 Sobic003G017200 Sobic004G262600--Sobic003G017200 Sobic003G356300 Sobic003G356300 Sobic006G215000--Sobic003G356300 Sobic003G348200 Sobic003G348200 Sobic006G215000--Sobic003G348200 Sobic001G382400 Sobic001G382400 Sobic006G215000--Sobic001G382400 Sobic004G331900 Sobic004G331900 Sobic006G215000--Sobic004G331900 Sobic003G327600 Sobic003G327600 Sobic006G215000--Sobic003G327600 Sobic004G229000 Sobic004G229000 Sobic006G215000--Sobic004G229000 Sobic001G205900 Sobic001G205900 Sobic006G215000--Sobic001G205900 Sobic001G500500 Sobic001G500500 Sobic006G215000--Sobic001G500500 Sobic002G263000 Sobic002G263000 Sobic006G215000--Sobic002G263000
Octagon: transcription factors


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