Gene annotation
Transcriptome id Sobic.001G440800.1
Synonym TKI1, Sb01g041425
Functional annotation myb/SANT domain protein, putative, expressed
UniProt A0A1B6QPF3
Pfam PF00249
Panther DB PTHR21677
NCBI CDD KOG4468; Polycomb-group transcriptional regulator
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36960 : TSL-kinase interacting protein 1
RAP-DB (Rice) LOC_Os03g13790.2 : myb/SANT domain protein, putative, expressed
MaizeGDB (Corn) Zm00025a001510 , Zm00025a052922
Brachypodium KQK22636 , KQK22635
Barley HORVU4Hr1G064060.6 , HORVU4Hr1G064060.7 , HORVU4Hr1G064060.4 , HORVU4Hr1G064060.10 , HORVU4Hr1G064060.11 , HORVU4Hr1G064060.12 , HORVU4Hr1G064060.14 , HORVU4Hr1G064060.15 , HORVU4Hr1G064060.16 , HORVU4Hr1G064060.17 , HORVU4Hr1G064060.21 , HORVU4Hr1G064060.20 , HORVU4Hr1G064060.22 , HORVU4Hr1G064060.8 , HORVU4Hr1G064060.9 , HORVU4Hr1G064060.2 , HORVU4Hr1G064060.3 , HORVU4Hr1G064060.1 , HORVU4Hr1G064060.5 , HORVU4Hr1G064060.18 , HORVU4Hr1G064060.19 , HORVU4Hr1G064060.13
Wheat TraesCS4B02G228500 , TraesCS4A02G072600 , TraesCS4A02G072600 , TraesCS4D02G229400 , TraesCS4D02G229400
Populus PNT31277 , PNT31279 , PNT31278 , PNT31280


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G142900 immunoglobulin/major histocompatibility complex, putative, expressed K12607: CCR4-NOT transcription complex subunit 10
2 Sobic.006G034500 elongation factor Tu, putative, expressed K03267: ERF3, peptide chain release factor subunit 3
3 Sobic.005G062200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
4 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
5 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
6 Sobic.002G401500 WD domain, G-beta repeat domain containing protein, expressed K14005: protein transport protein SEC31
7 Sobic.006G260500 expressed protein -
8 Sobic.008G088872 - -
9 Sobic.001G263600 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
10 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
11 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
12 Sobic.004G206700 vesicle transport protein GOT1B, putative, expressed -
13 Sobic.004G131300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
14 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
15 Sobic.003G110000 TBC domain containing protein, expressed -
16 Sobic.004G261600 expressed protein -
17 Sobic.009G109925 - -
18 Sobic.001G382600 expressed protein -
19 Sobic.002G045600 transcriptional corepressor SEUSS, putative, expressed -
20 Sobic.010G020400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A


Gene co-expression network
sample Sobic001G440800 Sobic001G440800 Sobic002G142900 Sobic002G142900 Sobic001G440800--Sobic002G142900 Sobic006G034500 Sobic006G034500 Sobic001G440800--Sobic006G034500 Sobic005G062200 Sobic005G062200 Sobic001G440800--Sobic005G062200 Sobic003G104000 Sobic003G104000 Sobic001G440800--Sobic003G104000 Sobic008G055900 Sobic008G055900 Sobic001G440800--Sobic008G055900 Sobic002G401500 Sobic002G401500 Sobic001G440800--Sobic002G401500 Sobic006G260500 Sobic006G260500 Sobic001G440800--Sobic006G260500 Sobic008G088872 Sobic008G088872 Sobic001G440800--Sobic008G088872 Sobic001G263600 Sobic001G263600 Sobic001G440800--Sobic001G263600 Sobic004G131300 Sobic004G131300 Sobic002G142900--Sobic004G131300 Sobic002G142900--Sobic001G263600 Sobic002G133300 Sobic002G133300 Sobic002G142900--Sobic002G133300 Sobic003G195000 Sobic003G195000 Sobic002G142900--Sobic003G195000 Sobic007G054800 Sobic007G054800 Sobic002G142900--Sobic007G054800 Sobic005G162500 Sobic005G162500 Sobic002G142900--Sobic005G162500 Sobic002G142900--Sobic003G104000 Sobic002G256700 Sobic002G256700 Sobic002G142900--Sobic002G256700 Sobic002G335600 Sobic002G335600 Sobic002G142900--Sobic002G335600 Sobic004G145000 Sobic004G145000 Sobic006G034500--Sobic004G145000 Sobic006G034500--Sobic001G440800 Sobic006G034500--Sobic003G104000 Sobic006G034500--Sobic002G256700 Sobic009G201700 Sobic009G201700 Sobic006G034500--Sobic009G201700 Sobic006G034500--Sobic008G055900 Sobic006G034500--Sobic002G142900 Sobic004G088501 Sobic004G088501 Sobic006G034500--Sobic004G088501 Sobic004G261600 Sobic004G261600 Sobic006G034500--Sobic004G261600 Sobic005G062200--Sobic008G088872 Sobic005G062200--Sobic001G263600 Sobic005G062200--Sobic002G401500 Sobic006G184900 Sobic006G184900 Sobic005G062200--Sobic006G184900 Sobic002G042600 Sobic002G042600 Sobic005G062200--Sobic002G042600 Sobic003G209200 Sobic003G209200 Sobic005G062200--Sobic003G209200 Sobic003G114400 Sobic003G114400 Sobic005G062200--Sobic003G114400 Sobic001G065100 Sobic001G065100 Sobic005G062200--Sobic001G065100 Sobic005G062200--Sobic002G335600 Sobic003G337300 Sobic003G337300 Sobic003G104000--Sobic003G337300 Sobic003G104000--Sobic002G256700 Sobic006G126100 Sobic006G126100 Sobic003G104000--Sobic006G126100 Sobic001G251100 Sobic001G251100 Sobic003G104000--Sobic001G251100 Sobic003G104000--Sobic002G142900 Sobic002G295500 Sobic002G295500 Sobic003G104000--Sobic002G295500 Sobic004G277200 Sobic004G277200 Sobic003G104000--Sobic004G277200 Sobic003G104000--Sobic004G131300 Sobic006G261400 Sobic006G261400 Sobic003G104000--Sobic006G261400 Sobic002G020700 Sobic002G020700 Sobic008G055900--Sobic002G020700 Sobic010G223300 Sobic010G223300 Sobic008G055900--Sobic010G223300 Sobic008G103300 Sobic008G103300 Sobic008G055900--Sobic008G103300 Sobic010G020400 Sobic010G020400 Sobic008G055900--Sobic010G020400 Sobic006G136400 Sobic006G136400 Sobic008G055900--Sobic006G136400 Sobic001G447300 Sobic001G447300 Sobic008G055900--Sobic001G447300 Sobic008G085700 Sobic008G085700 Sobic008G055900--Sobic008G085700 Sobic006G056200 Sobic006G056200 Sobic008G055900--Sobic006G056200 Sobic008G129600 Sobic008G129600 Sobic008G055900--Sobic008G129600 Sobic004G322400 Sobic004G322400 Sobic002G401500--Sobic004G322400 Sobic009G131300 Sobic009G131300 Sobic002G401500--Sobic009G131300 Sobic002G401500--Sobic002G042600 Sobic004G053500 Sobic004G053500 Sobic002G401500--Sobic004G053500 Sobic002G401500--Sobic005G062200 Sobic002G429300 Sobic002G429300 Sobic002G401500--Sobic002G429300 Sobic002G401500--Sobic001G065100 Sobic002G401500--Sobic008G088872 Sobic002G401500--Sobic001G263600 Sobic006G260500--Sobic003G114400 Sobic006G077300 Sobic006G077300 Sobic006G260500--Sobic006G077300 Sobic004G241900 Sobic004G241900 Sobic006G260500--Sobic004G241900 Sobic006G260500--Sobic003G209200 Sobic006G260500--Sobic010G223300 Sobic006G260500--Sobic005G062200 Sobic007G005500 Sobic007G005500 Sobic006G260500--Sobic007G005500 Sobic007G075500 Sobic007G075500 Sobic006G260500--Sobic007G075500 Sobic006G021700 Sobic006G021700 Sobic006G260500--Sobic006G021700 Sobic008G088872--Sobic005G162500 Sobic001G370900 Sobic001G370900 Sobic008G088872--Sobic001G370900 Sobic008G088872--Sobic009G131300 Sobic008G088872--Sobic006G184900 Sobic008G088872--Sobic005G062200 Sobic008G088872--Sobic001G263600 Sobic008G088872--Sobic002G042600 Sobic008G088872--Sobic002G429300 Sobic008G088872--Sobic002G335600 Sobic001G263600--Sobic008G088872 Sobic001G263600--Sobic002G429300 Sobic001G263600--Sobic002G142900 Sobic001G263600--Sobic005G062200 Sobic008G098900 Sobic008G098900 Sobic001G263600--Sobic008G098900 Sobic001G263600--Sobic002G042600 Sobic001G273700 Sobic001G273700 Sobic001G263600--Sobic001G273700 Sobic003G072200 Sobic003G072200 Sobic001G263600--Sobic003G072200 Sobic001G263600--Sobic009G131300
Octagon: transcription factors


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